Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is sfsA [H]

Identifier: 218884443

GI number: 218884443

Start: 1065024

End: 1065749

Strand: Direct

Name: sfsA [H]

Synonym: DKAM_1132

Alternate gene names: 218884443

Gene position: 1065024-1065749 (Clockwise)

Preceding gene: 218884442

Following gene: 218884449

Centisome position: 78.01

GC content: 46.28

Gene sequence:

>726_bases
GTGTACCCTCTTCTAACACTCGACCCCAGTAAGATATTCGAGTGCACCATAATTAAACGGCTCAACCGCTTCACAGTGTT
AGTCGAAGCCGGTGATGGATTGATCCAGGCACACCTCAACAACACCGGCAGGCTATATGGAATACTCGAACCCGGGAGGC
GGGGCGTGCTCATAAATATAAATGGTGTCAAGCTCAGGCACAGGCTTCTAGGTGTCTACAATAATGAGGAAGTAATCCTA
TTGGATACCAGTATCCAGGAAAAAGCGTTTCTGAAGGCAGCCGAGTCAGGGTTGATACCATGGTTGAACCCCTGTAGCCT
TATTAAGAGAAACATAAGGATTAATCAGGCTGTGATAGACTTCCTGTTTAAATGCGGGAACACCATGGTATTCATTGAGT
TAAAGAGCGCCGTGATGAATCTAAACGGTTATTCCGGGTATCCGGATGCACCCACTGAGCGAGGTAGGAGACAGATAAGG
GTTCTCAGCGAGCTAGCCTCAACAAGTGTTAAATCAATAGTTGTGTTCGTGTCCAGTGTACCAGGTGCAAGAGGCTTTAA
GCTGTATTGCGGTTTCGATAAGGAAATAGGAAGGGTTGTCCGGGATGCTGTAGCTAAAGGAGTATTGTTTAAGGCTGTGT
CGATAAGCTTTAACCACTCAACCTACAGCATAGCGCTTGAAAACCCGGATTTAACAGTGGATCTTTGGAGTATGTGTGAA
GAGTAG

Upstream 100 bases:

>100_bases
TCCCCTGACATCGGGCAGGTAACAATACTAGCACTAATTATTCTCTGGCGGAAAGAGCTCCTCGGATTATTACAGGGGAA
AACTACGGGGGGAGAAAATA

Downstream 100 bases:

>100_bases
ATTTAAGCTACATCTAGTACTAGTTGCCCTAAGTGTCCTCCCTTCTTTAACTCTATTAATGCCTCATTGGCCTCGCTAAG
CCTATAGGTTTTCACTTCAG

Product: sugar fermentation stimulation protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MYPLLTLDPSKIFECTIIKRLNRFTVLVEAGDGLIQAHLNNTGRLYGILEPGRRGVLININGVKLRHRLLGVYNNEEVIL
LDTSIQEKAFLKAAESGLIPWLNPCSLIKRNIRINQAVIDFLFKCGNTMVFIELKSAVMNLNGYSGYPDAPTERGRRQIR
VLSELASTSVKSIVVFVSSVPGARGFKLYCGFDKEIGRVVRDAVAKGVLFKAVSISFNHSTYSIALENPDLTVDLWSMCE
E

Sequences:

>Translated_241_residues
MYPLLTLDPSKIFECTIIKRLNRFTVLVEAGDGLIQAHLNNTGRLYGILEPGRRGVLININGVKLRHRLLGVYNNEEVIL
LDTSIQEKAFLKAAESGLIPWLNPCSLIKRNIRINQAVIDFLFKCGNTMVFIELKSAVMNLNGYSGYPDAPTERGRRQIR
VLSELASTSVKSIVVFVSSVPGARGFKLYCGFDKEIGRVVRDAVAKGVLFKAVSISFNHSTYSIALENPDLTVDLWSMCE
E
>Mature_241_residues
MYPLLTLDPSKIFECTIIKRLNRFTVLVEAGDGLIQAHLNNTGRLYGILEPGRRGVLININGVKLRHRLLGVYNNEEVIL
LDTSIQEKAFLKAAESGLIPWLNPCSLIKRNIRINQAVIDFLFKCGNTMVFIELKSAVMNLNGYSGYPDAPTERGRRQIR
VLSELASTSVKSIVVFVSSVPGARGFKLYCGFDKEIGRVVRDAVAKGVLFKAVSISFNHSTYSIALENPDLTVDLWSMCE
E

Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]

COG id: COG1489

COG function: function code R; DNA-binding protein, stimulates sugar fermentation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sfsA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005224 [H]

Pfam domain/function: PF03749 SfsA [H]

EC number: NA

Molecular weight: Translated: 26851; Mature: 26851

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYPLLTLDPSKIFECTIIKRLNRFTVLVEAGDGLIQAHLNNTGRLYGILEPGRRGVLINI
CCCEEECCHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEE
NGVKLRHRLLGVYNNEEVILLDTSIQEKAFLKAAESGLIPWLNPCSLIKRNIRINQAVID
CCEEEEEEEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHH
FLFKCGNTMVFIELKSAVMNLNGYSGYPDAPTERGRRQIRVLSELASTSVKSIVVFVSSV
HHHHCCCEEEEEEEEHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECC
PGARGFKLYCGFDKEIGRVVRDAVAKGVLFKAVSISFNHSTYSIALENPDLTVDLWSMCE
CCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEEEEEECCCEEEEEECCCCCEEEHHHHCC
E
C
>Mature Secondary Structure
MYPLLTLDPSKIFECTIIKRLNRFTVLVEAGDGLIQAHLNNTGRLYGILEPGRRGVLINI
CCCEEECCHHHHHHHHHHHHCCEEEEEEECCCCEEEEEECCCCEEEEEECCCCCEEEEEE
NGVKLRHRLLGVYNNEEVILLDTSIQEKAFLKAAESGLIPWLNPCSLIKRNIRINQAVID
CCEEEEEEEEEEECCCEEEEEECCCHHHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHH
FLFKCGNTMVFIELKSAVMNLNGYSGYPDAPTERGRRQIRVLSELASTSVKSIVVFVSSV
HHHHCCCEEEEEEEEHHHEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECC
PGARGFKLYCGFDKEIGRVVRDAVAKGVLFKAVSISFNHSTYSIALENPDLTVDLWSMCE
CCCCCEEEEECCCHHHHHHHHHHHHHCCEEEEEEEEECCCEEEEEECCCCCEEEHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA