Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884430

Identifier: 218884430

GI number: 218884430

Start: 1054398

End: 1055150

Strand: Direct

Name: 218884430

Synonym: DKAM_1119

Alternate gene names: NA

Gene position: 1054398-1055150 (Clockwise)

Preceding gene: 218884429

Following gene: 218884431

Centisome position: 77.23

GC content: 46.61

Gene sequence:

>753_bases
ATGCTCATCAAACTGATTGGTAGCGGGTGGAAGAATACCAGCCTAGTTGACGTCCACGGCTCCGTAACCTTTACGCTATG
GCTCTGCATGTGTAACTTGAAGTGTCCATTCTGCCATAACTGGAGGCTTGCAAGCAATGAGGGTTCAATATGTAAGCCCC
TAGACATCAGTAGGCTCCTCGATGATCTCTCAGCGAGCAGGAGCTTCATAGACTATCTTCATGTAACCGGTGGAGAACCA
CTACTCCAATACACTGGCCTATCATGGTTGTTTAAGGAGGCTAAGGAGATGGATGTGGCAACTAGTTTAAACAGTAATCT
AACCCTTTACATGCCCCTTAAGAAGCTGGTGGATCAAGGCGTCATTGACCATGTTGCAACAGACCTTAAGACCCCTTTCG
ACGAGTTATCAGGCCTCGGCGATGCATCGAATATATTATTTAAACAGTTCACGGAGTCGTTGAGACTCATAGTTGAGAAA
AACATCCCCCTCGAGCTTAGGATACCGGTTGCCAAAAACTTAACGTTCAAGACGCTGGAGAAGACACTGGAATCCATCAT
GCCTACCCTCAGTAAACACGTGGAAAATACCGTTGTCATTGTGAACCCCCTCCTATCAAAGCCTCTCACTAATCCCCGTA
GCGTAGAGTGGTGTGATAAATACTGTATGCCCAGCGAGGTAGAACTTGAAGGAGTCGCAGGTGTTTTTAGAAGGCTCGGG
TTTAAGACCTTTATTAAAGAGGTGCCGAGGTAA

Upstream 100 bases:

>100_bases
GAACTGGAACCCCCAGAGGAGGAAGGAGTTCTGGACACGGAATCACTACGTCTTCTAAACACCGACTCGTTTTCTCGATT
TTCTCGTCTGGTGGTTTCTC

Downstream 100 bases:

>100_bases
TGGAGAAATACCTACCGCGGGCCCTCCTCGTTGCACATTTACCTGATACAAGTAGGATTATAGCATCTGCTTCAAAGCTC
ACCCTATCACCAAGAGACTT

Product: anaerobic ribonucleoside-triphosphate reductase activating protein

Products: NA

Alternate protein names: Anaerobic Ribonucleoside Triphosphate Reductase Activating; Anaerobic Ribonucleotide Triphosphate Reductase Activating; Pyruvate Formate-Lyase Activating Related Protein; Pyruvate-Formate Lyase-Activating

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MLIKLIGSGWKNTSLVDVHGSVTFTLWLCMCNLKCPFCHNWRLASNEGSICKPLDISRLLDDLSASRSFIDYLHVTGGEP
LLQYTGLSWLFKEAKEMDVATSLNSNLTLYMPLKKLVDQGVIDHVATDLKTPFDELSGLGDASNILFKQFTESLRLIVEK
NIPLELRIPVAKNLTFKTLEKTLESIMPTLSKHVENTVVIVNPLLSKPLTNPRSVEWCDKYCMPSEVELEGVAGVFRRLG
FKTFIKEVPR

Sequences:

>Translated_250_residues
MLIKLIGSGWKNTSLVDVHGSVTFTLWLCMCNLKCPFCHNWRLASNEGSICKPLDISRLLDDLSASRSFIDYLHVTGGEP
LLQYTGLSWLFKEAKEMDVATSLNSNLTLYMPLKKLVDQGVIDHVATDLKTPFDELSGLGDASNILFKQFTESLRLIVEK
NIPLELRIPVAKNLTFKTLEKTLESIMPTLSKHVENTVVIVNPLLSKPLTNPRSVEWCDKYCMPSEVELEGVAGVFRRLG
FKTFIKEVPR
>Mature_250_residues
MLIKLIGSGWKNTSLVDVHGSVTFTLWLCMCNLKCPFCHNWRLASNEGSICKPLDISRLLDDLSASRSFIDYLHVTGGEP
LLQYTGLSWLFKEAKEMDVATSLNSNLTLYMPLKKLVDQGVIDHVATDLKTPFDELSGLGDASNILFKQFTESLRLIVEK
NIPLELRIPVAKNLTFKTLEKTLESIMPTLSKHVENTVVIVNPLLSKPLTNPRSVEWCDKYCMPSEVELEGVAGVFRRLG
FKTFIKEVPR

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28145; Mature: 28145

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKLIGSGWKNTSLVDVHGSVTFTLWLCMCNLKCPFCHNWRLASNEGSICKPLDISRLL
CEEEEECCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHH
DDLSASRSFIDYLHVTGGEPLLQYTGLSWLFKEAKEMDVATSLNSNLTLYMPLKKLVDQG
HHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH
VIDHVATDLKTPFDELSGLGDASNILFKQFTESLRLIVEKNIPLELRIPVAKNLTFKTLE
HHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCHHHHHH
KTLESIMPTLSKHVENTVVIVNPLLSKPLTNPRSVEWCDKYCMPSEVELEGVAGVFRRLG
HHHHHHHHHHHHHHCCEEEEEECHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH
FKTFIKEVPR
HHHHHHHCCC
>Mature Secondary Structure
MLIKLIGSGWKNTSLVDVHGSVTFTLWLCMCNLKCPFCHNWRLASNEGSICKPLDISRLL
CEEEEECCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHH
DDLSASRSFIDYLHVTGGEPLLQYTGLSWLFKEAKEMDVATSLNSNLTLYMPLKKLVDQG
HHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH
VIDHVATDLKTPFDELSGLGDASNILFKQFTESLRLIVEKNIPLELRIPVAKNLTFKTLE
HHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCHHHHHH
KTLESIMPTLSKHVENTVVIVNPLLSKPLTNPRSVEWCDKYCMPSEVELEGVAGVFRRLG
HHHHHHHHHHHHHHCCEEEEEECHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH
FKTFIKEVPR
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA