| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884430
Identifier: 218884430
GI number: 218884430
Start: 1054398
End: 1055150
Strand: Direct
Name: 218884430
Synonym: DKAM_1119
Alternate gene names: NA
Gene position: 1054398-1055150 (Clockwise)
Preceding gene: 218884429
Following gene: 218884431
Centisome position: 77.23
GC content: 46.61
Gene sequence:
>753_bases ATGCTCATCAAACTGATTGGTAGCGGGTGGAAGAATACCAGCCTAGTTGACGTCCACGGCTCCGTAACCTTTACGCTATG GCTCTGCATGTGTAACTTGAAGTGTCCATTCTGCCATAACTGGAGGCTTGCAAGCAATGAGGGTTCAATATGTAAGCCCC TAGACATCAGTAGGCTCCTCGATGATCTCTCAGCGAGCAGGAGCTTCATAGACTATCTTCATGTAACCGGTGGAGAACCA CTACTCCAATACACTGGCCTATCATGGTTGTTTAAGGAGGCTAAGGAGATGGATGTGGCAACTAGTTTAAACAGTAATCT AACCCTTTACATGCCCCTTAAGAAGCTGGTGGATCAAGGCGTCATTGACCATGTTGCAACAGACCTTAAGACCCCTTTCG ACGAGTTATCAGGCCTCGGCGATGCATCGAATATATTATTTAAACAGTTCACGGAGTCGTTGAGACTCATAGTTGAGAAA AACATCCCCCTCGAGCTTAGGATACCGGTTGCCAAAAACTTAACGTTCAAGACGCTGGAGAAGACACTGGAATCCATCAT GCCTACCCTCAGTAAACACGTGGAAAATACCGTTGTCATTGTGAACCCCCTCCTATCAAAGCCTCTCACTAATCCCCGTA GCGTAGAGTGGTGTGATAAATACTGTATGCCCAGCGAGGTAGAACTTGAAGGAGTCGCAGGTGTTTTTAGAAGGCTCGGG TTTAAGACCTTTATTAAAGAGGTGCCGAGGTAA
Upstream 100 bases:
>100_bases GAACTGGAACCCCCAGAGGAGGAAGGAGTTCTGGACACGGAATCACTACGTCTTCTAAACACCGACTCGTTTTCTCGATT TTCTCGTCTGGTGGTTTCTC
Downstream 100 bases:
>100_bases TGGAGAAATACCTACCGCGGGCCCTCCTCGTTGCACATTTACCTGATACAAGTAGGATTATAGCATCTGCTTCAAAGCTC ACCCTATCACCAAGAGACTT
Product: anaerobic ribonucleoside-triphosphate reductase activating protein
Products: NA
Alternate protein names: Anaerobic Ribonucleoside Triphosphate Reductase Activating; Anaerobic Ribonucleotide Triphosphate Reductase Activating; Pyruvate Formate-Lyase Activating Related Protein; Pyruvate-Formate Lyase-Activating
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MLIKLIGSGWKNTSLVDVHGSVTFTLWLCMCNLKCPFCHNWRLASNEGSICKPLDISRLLDDLSASRSFIDYLHVTGGEP LLQYTGLSWLFKEAKEMDVATSLNSNLTLYMPLKKLVDQGVIDHVATDLKTPFDELSGLGDASNILFKQFTESLRLIVEK NIPLELRIPVAKNLTFKTLEKTLESIMPTLSKHVENTVVIVNPLLSKPLTNPRSVEWCDKYCMPSEVELEGVAGVFRRLG FKTFIKEVPR
Sequences:
>Translated_250_residues MLIKLIGSGWKNTSLVDVHGSVTFTLWLCMCNLKCPFCHNWRLASNEGSICKPLDISRLLDDLSASRSFIDYLHVTGGEP LLQYTGLSWLFKEAKEMDVATSLNSNLTLYMPLKKLVDQGVIDHVATDLKTPFDELSGLGDASNILFKQFTESLRLIVEK NIPLELRIPVAKNLTFKTLEKTLESIMPTLSKHVENTVVIVNPLLSKPLTNPRSVEWCDKYCMPSEVELEGVAGVFRRLG FKTFIKEVPR >Mature_250_residues MLIKLIGSGWKNTSLVDVHGSVTFTLWLCMCNLKCPFCHNWRLASNEGSICKPLDISRLLDDLSASRSFIDYLHVTGGEP LLQYTGLSWLFKEAKEMDVATSLNSNLTLYMPLKKLVDQGVIDHVATDLKTPFDELSGLGDASNILFKQFTESLRLIVEK NIPLELRIPVAKNLTFKTLEKTLESIMPTLSKHVENTVVIVNPLLSKPLTNPRSVEWCDKYCMPSEVELEGVAGVFRRLG FKTFIKEVPR
Specific function: Unknown
COG id: COG1180
COG function: function code O; Pyruvate-formate lyase-activating enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28145; Mature: 28145
Theoretical pI: Translated: 7.39; Mature: 7.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIKLIGSGWKNTSLVDVHGSVTFTLWLCMCNLKCPFCHNWRLASNEGSICKPLDISRLL CEEEEECCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHH DDLSASRSFIDYLHVTGGEPLLQYTGLSWLFKEAKEMDVATSLNSNLTLYMPLKKLVDQG HHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH VIDHVATDLKTPFDELSGLGDASNILFKQFTESLRLIVEKNIPLELRIPVAKNLTFKTLE HHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCHHHHHH KTLESIMPTLSKHVENTVVIVNPLLSKPLTNPRSVEWCDKYCMPSEVELEGVAGVFRRLG HHHHHHHHHHHHHHCCEEEEEECHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH FKTFIKEVPR HHHHHHHCCC >Mature Secondary Structure MLIKLIGSGWKNTSLVDVHGSVTFTLWLCMCNLKCPFCHNWRLASNEGSICKPLDISRLL CEEEEECCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCHHHHH DDLSASRSFIDYLHVTGGEPLLQYTGLSWLFKEAKEMDVATSLNSNLTLYMPLKKLVDQG HHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHH VIDHVATDLKTPFDELSGLGDASNILFKQFTESLRLIVEKNIPLELRIPVAKNLTFKTLE HHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHCCCHHHHHH KTLESIMPTLSKHVENTVVIVNPLLSKPLTNPRSVEWCDKYCMPSEVELEGVAGVFRRLG HHHHHHHHHHHHHHCCEEEEEECHHCCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHH FKTFIKEVPR HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA