| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884371
Identifier: 218884371
GI number: 218884371
Start: 1006798
End: 1007052
Strand: Direct
Name: 218884371
Synonym: DKAM_1060
Alternate gene names: NA
Gene position: 1006798-1007052 (Clockwise)
Preceding gene: 218884370
Following gene: 218884374
Centisome position: 73.75
GC content: 41.18
Gene sequence:
>255_bases GTGAGTGGAGGAATAGGCATCATTGGAGAACTAAGGGGTAAATTAAGCGAGATAGGCTGTAGAAACACCGAGTTATCCCA GAGACTTGAACTCTACTATTGTGGTGACAGTACTGTTATCATGGTTGAGGTCTTTAAAGACACCGTGTTAATAGATATTG TAAATCCATTGACCGATGAATTAGTTGAAGATGTCATCAGGGTTCTCCCACCTAGAAAGACTATGATCAGGATCCTTGAA AGAGGATTCACGTAG
Upstream 100 bases:
>100_bases GGGTGTTAAAGTAGTTGTTACAAGCCTTGAAACCATAGATGAAGTAATAGGGGAATTCTTCACTGGGTGAGCCTAAGTGA TAAAGCACTATACAATCGAT
Downstream 100 bases:
>100_bases AAAACCTTCAGCTATGAGGGGTAAAACCCCGCCTTCCTACTGAAATTCATAATCATTATTGAAAGTATCCTACCCTCCCT AATCCTGAAAGCTATATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSGGIGIIGELRGKLSEIGCRNTELSQRLELYYCGDSTVIMVEVFKDTVLIDIVNPLTDELVEDVIRVLPPRKTMIRILE RGFT
Sequences:
>Translated_84_residues MSGGIGIIGELRGKLSEIGCRNTELSQRLELYYCGDSTVIMVEVFKDTVLIDIVNPLTDELVEDVIRVLPPRKTMIRILE RGFT >Mature_83_residues SGGIGIIGELRGKLSEIGCRNTELSQRLELYYCGDSTVIMVEVFKDTVLIDIVNPLTDELVEDVIRVLPPRKTMIRILER GFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9440; Mature: 9309
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGIGIIGELRGKLSEIGCRNTELSQRLELYYCGDSTVIMVEVFKDTVLIDIVNPLTDE CCCCCCHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCEEEEEECCCCCEEHHHHHHHHH LVEDVIRVLPPRKTMIRILERGFT HHHHHHHHCCCHHHHHHHHHHCCC >Mature Secondary Structure SGGIGIIGELRGKLSEIGCRNTELSQRLELYYCGDSTVIMVEVFKDTVLIDIVNPLTDE CCCCCHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCEEEEEECCCCCEEHHHHHHHHH LVEDVIRVLPPRKTMIRILERGFT HHHHHHHHCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA