Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884306
Identifier: 218884306
GI number: 218884306
Start: 941306
End: 942256
Strand: Direct
Name: 218884306
Synonym: DKAM_0995
Alternate gene names: NA
Gene position: 941306-942256 (Clockwise)
Preceding gene: 218884305
Following gene: 218884307
Centisome position: 68.95
GC content: 41.22
Gene sequence:
>951_bases ATGCTAATCGAATCCTCCAAGCTGTTTTTTACTAGAAGCGACTACATTAACATATTGTCATCACAGAATCTAGAGACAGC GATTGGTTATCTCAGTGAGAAATTCCTAGCTAGTGAAATAGGTAAATTAGCGGGGATTCGCAGGATATCCCTCATAGATG TATATAATGCATTAGATAAAGGCTATAGAGGCATATTGCAATCATTATTCAGTCAAGCCAAGAATGAGGAGAGATCTATT GCTGATAAAATACTTTGGCTACTTAGCTCACTAGATCTTTACTTATCCCTAAACGCACTCACCGCTGGAGTTAAGCCTCC ACTAATGGCTTCACCCCTACCGCTCTTAATACCGGAAATCCCTGATCCCACGAATATCTATATACTGAAAGAGATTCTAC CAGTAGAGCTACATGGACTGGTTAAAGAATACATAAATAAGAGAAGTATTCAGTTGCAACAGATAATTAGAGCTTTAGAC AGTCTAGCCATGAAGGTTGATAAACTAAAGTATTACGAGTTAAGCGTTCTAGTCAACCTACTACATGATATACAGCTGCT TAAAGCCTGTATATTATATCCAGAAGTAAGGCAGCTCCAGCCCAGGGTCTTCTCGCTTAATCCGGCTGATTTTTACGAGA ACTGTGGAAAAAGTATCAGGGAGGTAAGCGCCATGCTCTCCAAGGATAGGCCGTTCGCGGTGGTTTTCTCAGAAGCCATA AACGATTCATTAAAGTTCTCAAGTGGCATCGAGGCCTTAGACCTAGGTGTCTATACGGGTCTACACTATCTTGCATCCCT CATACTTCAGAAAACAGTCATTGAAAAAACCTGTAGGCTCATGCTTAAACTACTTGGCCAATACGTGTTTTTGAAGCTTG TTTTCACAGTGGCCGGCTCCGGCTTATATAGACAAGAGGCCTCGGCATTCATTAGTAAATGGGTGACTTGA
Upstream 100 bases:
>100_bases CGGTATAATAGTGGATAACACGTATGAATCCCGGTTCAAGGAGTTCCAGAACAAGTATCTAAATGAGGTCAGGAGAATAC TGTGGGGCTGATGCATCCCC
Downstream 100 bases:
>100_bases ATTGTACAGAGGTGAAATACTAGTTATAGGTGATGAGTACTTATCCCTAATAGGTGTTGCTGGGGGTGCTTCCTCAATAG TATATAATGGTAATTGTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MLIESSKLFFTRSDYINILSSQNLETAIGYLSEKFLASEIGKLAGIRRISLIDVYNALDKGYRGILQSLFSQAKNEERSI ADKILWLLSSLDLYLSLNALTAGVKPPLMASPLPLLIPEIPDPTNIYILKEILPVELHGLVKEYINKRSIQLQQIIRALD SLAMKVDKLKYYELSVLVNLLHDIQLLKACILYPEVRQLQPRVFSLNPADFYENCGKSIREVSAMLSKDRPFAVVFSEAI NDSLKFSSGIEALDLGVYTGLHYLASLILQKTVIEKTCRLMLKLLGQYVFLKLVFTVAGSGLYRQEASAFISKWVT
Sequences:
>Translated_316_residues MLIESSKLFFTRSDYINILSSQNLETAIGYLSEKFLASEIGKLAGIRRISLIDVYNALDKGYRGILQSLFSQAKNEERSI ADKILWLLSSLDLYLSLNALTAGVKPPLMASPLPLLIPEIPDPTNIYILKEILPVELHGLVKEYINKRSIQLQQIIRALD SLAMKVDKLKYYELSVLVNLLHDIQLLKACILYPEVRQLQPRVFSLNPADFYENCGKSIREVSAMLSKDRPFAVVFSEAI NDSLKFSSGIEALDLGVYTGLHYLASLILQKTVIEKTCRLMLKLLGQYVFLKLVFTVAGSGLYRQEASAFISKWVT >Mature_316_residues MLIESSKLFFTRSDYINILSSQNLETAIGYLSEKFLASEIGKLAGIRRISLIDVYNALDKGYRGILQSLFSQAKNEERSI ADKILWLLSSLDLYLSLNALTAGVKPPLMASPLPLLIPEIPDPTNIYILKEILPVELHGLVKEYINKRSIQLQQIIRALD SLAMKVDKLKYYELSVLVNLLHDIQLLKACILYPEVRQLQPRVFSLNPADFYENCGKSIREVSAMLSKDRPFAVVFSEAI NDSLKFSSGIEALDLGVYTGLHYLASLILQKTVIEKTCRLMLKLLGQYVFLKLVFTVAGSGLYRQEASAFISKWVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35600; Mature: 35600
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIESSKLFFTRSDYINILSSQNLETAIGYLSEKFLASEIGKLAGIRRISLIDVYNALDK CCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYRGILQSLFSQAKNEERSIADKILWLLSSLDLYLSLNALTAGVKPPLMASPLPLLIPEI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PDPTNIYILKEILPVELHGLVKEYINKRSIQLQQIIRALDSLAMKVDKLKYYELSVLVNL CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHDIQLLKACILYPEVRQLQPRVFSLNPADFYENCGKSIREVSAMLSKDRPFAVVFSEAI HHHHHHHHHHHHCHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHH NDSLKFSSGIEALDLGVYTGLHYLASLILQKTVIEKTCRLMLKLLGQYVFLKLVFTVAGS CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLYRQEASAFISKWVT CHHHHHHHHHHHHHCC >Mature Secondary Structure MLIESSKLFFTRSDYINILSSQNLETAIGYLSEKFLASEIGKLAGIRRISLIDVYNALDK CCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GYRGILQSLFSQAKNEERSIADKILWLLSSLDLYLSLNALTAGVKPPLMASPLPLLIPEI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PDPTNIYILKEILPVELHGLVKEYINKRSIQLQQIIRALDSLAMKVDKLKYYELSVLVNL CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHDIQLLKACILYPEVRQLQPRVFSLNPADFYENCGKSIREVSAMLSKDRPFAVVFSEAI HHHHHHHHHHHHCHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHH NDSLKFSSGIEALDLGVYTGLHYLASLILQKTVIEKTCRLMLKLLGQYVFLKLVFTVAGS CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLYRQEASAFISKWVT CHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA