Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884306

Identifier: 218884306

GI number: 218884306

Start: 941306

End: 942256

Strand: Direct

Name: 218884306

Synonym: DKAM_0995

Alternate gene names: NA

Gene position: 941306-942256 (Clockwise)

Preceding gene: 218884305

Following gene: 218884307

Centisome position: 68.95

GC content: 41.22

Gene sequence:

>951_bases
ATGCTAATCGAATCCTCCAAGCTGTTTTTTACTAGAAGCGACTACATTAACATATTGTCATCACAGAATCTAGAGACAGC
GATTGGTTATCTCAGTGAGAAATTCCTAGCTAGTGAAATAGGTAAATTAGCGGGGATTCGCAGGATATCCCTCATAGATG
TATATAATGCATTAGATAAAGGCTATAGAGGCATATTGCAATCATTATTCAGTCAAGCCAAGAATGAGGAGAGATCTATT
GCTGATAAAATACTTTGGCTACTTAGCTCACTAGATCTTTACTTATCCCTAAACGCACTCACCGCTGGAGTTAAGCCTCC
ACTAATGGCTTCACCCCTACCGCTCTTAATACCGGAAATCCCTGATCCCACGAATATCTATATACTGAAAGAGATTCTAC
CAGTAGAGCTACATGGACTGGTTAAAGAATACATAAATAAGAGAAGTATTCAGTTGCAACAGATAATTAGAGCTTTAGAC
AGTCTAGCCATGAAGGTTGATAAACTAAAGTATTACGAGTTAAGCGTTCTAGTCAACCTACTACATGATATACAGCTGCT
TAAAGCCTGTATATTATATCCAGAAGTAAGGCAGCTCCAGCCCAGGGTCTTCTCGCTTAATCCGGCTGATTTTTACGAGA
ACTGTGGAAAAAGTATCAGGGAGGTAAGCGCCATGCTCTCCAAGGATAGGCCGTTCGCGGTGGTTTTCTCAGAAGCCATA
AACGATTCATTAAAGTTCTCAAGTGGCATCGAGGCCTTAGACCTAGGTGTCTATACGGGTCTACACTATCTTGCATCCCT
CATACTTCAGAAAACAGTCATTGAAAAAACCTGTAGGCTCATGCTTAAACTACTTGGCCAATACGTGTTTTTGAAGCTTG
TTTTCACAGTGGCCGGCTCCGGCTTATATAGACAAGAGGCCTCGGCATTCATTAGTAAATGGGTGACTTGA

Upstream 100 bases:

>100_bases
CGGTATAATAGTGGATAACACGTATGAATCCCGGTTCAAGGAGTTCCAGAACAAGTATCTAAATGAGGTCAGGAGAATAC
TGTGGGGCTGATGCATCCCC

Downstream 100 bases:

>100_bases
ATTGTACAGAGGTGAAATACTAGTTATAGGTGATGAGTACTTATCCCTAATAGGTGTTGCTGGGGGTGCTTCCTCAATAG
TATATAATGGTAATTGTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MLIESSKLFFTRSDYINILSSQNLETAIGYLSEKFLASEIGKLAGIRRISLIDVYNALDKGYRGILQSLFSQAKNEERSI
ADKILWLLSSLDLYLSLNALTAGVKPPLMASPLPLLIPEIPDPTNIYILKEILPVELHGLVKEYINKRSIQLQQIIRALD
SLAMKVDKLKYYELSVLVNLLHDIQLLKACILYPEVRQLQPRVFSLNPADFYENCGKSIREVSAMLSKDRPFAVVFSEAI
NDSLKFSSGIEALDLGVYTGLHYLASLILQKTVIEKTCRLMLKLLGQYVFLKLVFTVAGSGLYRQEASAFISKWVT

Sequences:

>Translated_316_residues
MLIESSKLFFTRSDYINILSSQNLETAIGYLSEKFLASEIGKLAGIRRISLIDVYNALDKGYRGILQSLFSQAKNEERSI
ADKILWLLSSLDLYLSLNALTAGVKPPLMASPLPLLIPEIPDPTNIYILKEILPVELHGLVKEYINKRSIQLQQIIRALD
SLAMKVDKLKYYELSVLVNLLHDIQLLKACILYPEVRQLQPRVFSLNPADFYENCGKSIREVSAMLSKDRPFAVVFSEAI
NDSLKFSSGIEALDLGVYTGLHYLASLILQKTVIEKTCRLMLKLLGQYVFLKLVFTVAGSGLYRQEASAFISKWVT
>Mature_316_residues
MLIESSKLFFTRSDYINILSSQNLETAIGYLSEKFLASEIGKLAGIRRISLIDVYNALDKGYRGILQSLFSQAKNEERSI
ADKILWLLSSLDLYLSLNALTAGVKPPLMASPLPLLIPEIPDPTNIYILKEILPVELHGLVKEYINKRSIQLQQIIRALD
SLAMKVDKLKYYELSVLVNLLHDIQLLKACILYPEVRQLQPRVFSLNPADFYENCGKSIREVSAMLSKDRPFAVVFSEAI
NDSLKFSSGIEALDLGVYTGLHYLASLILQKTVIEKTCRLMLKLLGQYVFLKLVFTVAGSGLYRQEASAFISKWVT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35600; Mature: 35600

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIESSKLFFTRSDYINILSSQNLETAIGYLSEKFLASEIGKLAGIRRISLIDVYNALDK
CCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYRGILQSLFSQAKNEERSIADKILWLLSSLDLYLSLNALTAGVKPPLMASPLPLLIPEI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDPTNIYILKEILPVELHGLVKEYINKRSIQLQQIIRALDSLAMKVDKLKYYELSVLVNL
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHDIQLLKACILYPEVRQLQPRVFSLNPADFYENCGKSIREVSAMLSKDRPFAVVFSEAI
HHHHHHHHHHHHCHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHH
NDSLKFSSGIEALDLGVYTGLHYLASLILQKTVIEKTCRLMLKLLGQYVFLKLVFTVAGS
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLYRQEASAFISKWVT
CHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLIESSKLFFTRSDYINILSSQNLETAIGYLSEKFLASEIGKLAGIRRISLIDVYNALDK
CCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYRGILQSLFSQAKNEERSIADKILWLLSSLDLYLSLNALTAGVKPPLMASPLPLLIPEI
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDPTNIYILKEILPVELHGLVKEYINKRSIQLQQIIRALDSLAMKVDKLKYYELSVLVNL
CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHDIQLLKACILYPEVRQLQPRVFSLNPADFYENCGKSIREVSAMLSKDRPFAVVFSEAI
HHHHHHHHHHHHCHHHHHCCCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHH
NDSLKFSSGIEALDLGVYTGLHYLASLILQKTVIEKTCRLMLKLLGQYVFLKLVFTVAGS
CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GLYRQEASAFISKWVT
CHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA