Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is for [H]

Identifier: 218884286

GI number: 218884286

Start: 921280

End: 923112

Strand: Direct

Name: for [H]

Synonym: DKAM_0975

Alternate gene names: 218884286

Gene position: 921280-923112 (Clockwise)

Preceding gene: 218884284

Following gene: 218884287

Centisome position: 67.48

GC content: 46.04

Gene sequence:

>1833_bases
ATGTATATGTATGGCTGGTGGGGTAAGGCACTACTAATAGATTTAACCAAAAGTAAGGTAAAAGAGGTGAGCATAGAGCC
AGATATACTACATGGATTCATCGGTGGAAGAGGCCTAGCGGTTAGACTCCTATGGGATCTAATCCCTCCCGGAGTGGATC
CGTTATCACCATATAATGCATTAATAGTGGCCTCCGGTCCTCTCTCAGGGCTACCATTACCTAGTAGTGGTAAACTAGTT
GTAGCATCTAAGAGCCCGCTGACAAATGGCTATGGGGATGGCAATATAGGTTCCATGGCCAGCCACCACTTAAAGCACAG
CGGCTACGATGCACTCATAATCACAGGGGCATCTAAGAAACCCGTCTACCTCTACATTGAAAACGGTAAAGTAGATTTCA
GAAGTGCCGAGGATCTATGGGGGCTTGACACCTTCACTACTGAGGAAAAACTGGTTAGAGAACATGGTAGAAACATTGGC
ATACTTGAAATCGGGCCGGCGGGAGAGCATATGGTTAGATACGCCACAGTGATCTCCCAGAAGGGGAGAAGCGGAGGGCG
CCCAGGCATGGGTGCTGTAATGGGTAGCAAAAAGCTGAAGGCGATAGTGATCAAGGGAAACATGGAGCCACCTATAGCCG
ATAAAGAGGCTCTTAGAAAAATATCTGAGGAATCCTATAAGAAGATACAGGGTAGCGATAACTATGATTACTGGATTAGA
CAAGGCACAATGTCCACAATACAGTGGAGTCATCAAAACAGCGTCCTACCCACAATGAACTTTAGGGAGGGTATGTGGGA
GCTGTATGAAACCATAAGCGGTGATTTAATGGAAAAACTGAAGATAGATAGAAGGGGATGTCCTTACTGTAACATGCAGT
GCGGTAATGTTGTTAGTGATGATGTAGGAGAGGAGAGCGAACTAGACTATGAGAACGTAGCGATGCTGGGCAGTAATATA
TTATTAGAGAACTTGAAAAGGGTTGCCGAGATAAATAAGCTAGCTGATAAACTAGGGGTAGATACCATAAGTCTAGGCAA
CTCGATAGGGTTCTATATGGAAGCTAGCGAGAGAGGGCTAGTCAAAGAGAGAGTTGAATGGGGAGACTTCAAAGCCGTGA
GAGAGATAACCATTGATACGGCATATAGACGCGGGCTGGGAGCATTCATAGCTGAAGGAGTTATGAGGATGGCAAGGAGT
ATTGGCGGTGAGGCACTCGATTTCGCCATGCATGTGAAGGGTTTAGAGGTATCTGCATACAACTGTCACACAACCCCCGG
AATGGCCCTAGCATACGGCACATCTTCTATCGGGGCCCACCACAAGGATGCCTGGATAATAAGCTACGAAGTTAGAACAG
ATAGATCATCGTATAGCAGGGACAAGGTTGAACGCTTAATCTTCCTGCAAAACATGCGTGGAGGAATGTTTGAGTCGCTG
ACAACATGTAGGCTTCCATGGGTTGAAGTAGGCCTCGACCTCGAGTATTACCCAAGATTCCTTTCAGCTGTAACTGGTTT
AAAATGGAGCCTCGACGATATAAGCGTTTCTGCCAACAGGATCTACACGTTGATAAGGGCATTCTGGATACGCGAATACA
TGGGTTGGAGTAGCTCGATGGACTACCCGCCTACCAGATGGTTTAAACACCCACTTACAAAAGGACCGTATGCAGGCTCA
CACCTAGATATCTCTAAATACAGTGAAATGTTAAAGATATACTATGAAATACGTGGCTGGGATGAAAACGGTGTCCCAAA
GAAGGAGACTCTCATAAAGCTGGGGCTAGACTTCACAATACCTGTTCTAGAGGACATTGTGAAGCTACGGTAG

Upstream 100 bases:

>100_bases
TATTTAAAGCTGGGGGGATCCCCACAGCAATCATAGATTTCGCCCAGATCATACAAAGCTATAAAGTTTATATCTCTAAA
GGCGTTTAATATCTATTGTG

Downstream 100 bases:

>100_bases
ATACCTAATATTTTATTTTTAAACAAGTTATCTATAACTCCCCGGTATAACCCAGGGATATCTCAATGCATAGACTCAAG
GGTAGAATCGTCACCGGGCT

Product: aldehyde ferredoxin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 610; Mature: 610

Protein sequence:

>610_residues
MYMYGWWGKALLIDLTKSKVKEVSIEPDILHGFIGGRGLAVRLLWDLIPPGVDPLSPYNALIVASGPLSGLPLPSSGKLV
VASKSPLTNGYGDGNIGSMASHHLKHSGYDALIITGASKKPVYLYIENGKVDFRSAEDLWGLDTFTTEEKLVREHGRNIG
ILEIGPAGEHMVRYATVISQKGRSGGRPGMGAVMGSKKLKAIVIKGNMEPPIADKEALRKISEESYKKIQGSDNYDYWIR
QGTMSTIQWSHQNSVLPTMNFREGMWELYETISGDLMEKLKIDRRGCPYCNMQCGNVVSDDVGEESELDYENVAMLGSNI
LLENLKRVAEINKLADKLGVDTISLGNSIGFYMEASERGLVKERVEWGDFKAVREITIDTAYRRGLGAFIAEGVMRMARS
IGGEALDFAMHVKGLEVSAYNCHTTPGMALAYGTSSIGAHHKDAWIISYEVRTDRSSYSRDKVERLIFLQNMRGGMFESL
TTCRLPWVEVGLDLEYYPRFLSAVTGLKWSLDDISVSANRIYTLIRAFWIREYMGWSSSMDYPPTRWFKHPLTKGPYAGS
HLDISKYSEMLKIYYEIRGWDENGVPKKETLIKLGLDFTIPVLEDIVKLR

Sequences:

>Translated_610_residues
MYMYGWWGKALLIDLTKSKVKEVSIEPDILHGFIGGRGLAVRLLWDLIPPGVDPLSPYNALIVASGPLSGLPLPSSGKLV
VASKSPLTNGYGDGNIGSMASHHLKHSGYDALIITGASKKPVYLYIENGKVDFRSAEDLWGLDTFTTEEKLVREHGRNIG
ILEIGPAGEHMVRYATVISQKGRSGGRPGMGAVMGSKKLKAIVIKGNMEPPIADKEALRKISEESYKKIQGSDNYDYWIR
QGTMSTIQWSHQNSVLPTMNFREGMWELYETISGDLMEKLKIDRRGCPYCNMQCGNVVSDDVGEESELDYENVAMLGSNI
LLENLKRVAEINKLADKLGVDTISLGNSIGFYMEASERGLVKERVEWGDFKAVREITIDTAYRRGLGAFIAEGVMRMARS
IGGEALDFAMHVKGLEVSAYNCHTTPGMALAYGTSSIGAHHKDAWIISYEVRTDRSSYSRDKVERLIFLQNMRGGMFESL
TTCRLPWVEVGLDLEYYPRFLSAVTGLKWSLDDISVSANRIYTLIRAFWIREYMGWSSSMDYPPTRWFKHPLTKGPYAGS
HLDISKYSEMLKIYYEIRGWDENGVPKKETLIKLGLDFTIPVLEDIVKLR
>Mature_610_residues
MYMYGWWGKALLIDLTKSKVKEVSIEPDILHGFIGGRGLAVRLLWDLIPPGVDPLSPYNALIVASGPLSGLPLPSSGKLV
VASKSPLTNGYGDGNIGSMASHHLKHSGYDALIITGASKKPVYLYIENGKVDFRSAEDLWGLDTFTTEEKLVREHGRNIG
ILEIGPAGEHMVRYATVISQKGRSGGRPGMGAVMGSKKLKAIVIKGNMEPPIADKEALRKISEESYKKIQGSDNYDYWIR
QGTMSTIQWSHQNSVLPTMNFREGMWELYETISGDLMEKLKIDRRGCPYCNMQCGNVVSDDVGEESELDYENVAMLGSNI
LLENLKRVAEINKLADKLGVDTISLGNSIGFYMEASERGLVKERVEWGDFKAVREITIDTAYRRGLGAFIAEGVMRMARS
IGGEALDFAMHVKGLEVSAYNCHTTPGMALAYGTSSIGAHHKDAWIISYEVRTDRSSYSRDKVERLIFLQNMRGGMFESL
TTCRLPWVEVGLDLEYYPRFLSAVTGLKWSLDDISVSANRIYTLIRAFWIREYMGWSSSMDYPPTRWFKHPLTKGPYAGS
HLDISKYSEMLKIYYEIRGWDENGVPKKETLIKLGLDFTIPVLEDIVKLR

Specific function: Catalyzes the oxidation of C1-C3 aldehydes. Involved in peptides fermentation [H]

COG id: COG2414

COG function: function code C; Aldehyde:ferredoxin oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AOR/FOR family [H]

Homologues:

Organism=Escherichia coli, GI1787962, Length=232, Percent_Identity=33.6206896551724, Blast_Score=145, Evalue=6e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013985
- InterPro:   IPR013983
- InterPro:   IPR001203 [H]

Pfam domain/function: PF01314 AFOR_C; PF02730 AFOR_N [H]

EC number: =1.2.7.5 [H]

Molecular weight: Translated: 68258; Mature: 68258

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYMYGWWGKALLIDLTKSKVKEVSIEPDILHGFIGGRGLAVRLLWDLIPPGVDPLSPYNA
CEEEEEECCEEEEEECHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCE
LIVASGPLSGLPLPSSGKLVVASKSPLTNGYGDGNIGSMASHHLKHSGYDALIITGASKK
EEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCC
PVYLYIENGKVDFRSAEDLWGLDTFTTEEKLVREHGRNIGILEIGPAGEHMVRYATVISQ
CEEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH
KGRSGGRPGMGAVMGSKKLKAIVIKGNMEPPIADKEALRKISEESYKKIQGSDNYDYWIR
CCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
QGTMSTIQWSHQNSVLPTMNFREGMWELYETISGDLMEKLKIDRRGCPYCNMQCGNVVSD
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
DVGEESELDYENVAMLGSNILLENLKRVAEINKLADKLGVDTISLGNSIGFYMEASERGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCH
VKERVEWGDFKAVREITIDTAYRRGLGAFIAEGVMRMARSIGGEALDFAMHVKGLEVSAY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHEECCEEEEEE
NCHTTPGMALAYGTSSIGAHHKDAWIISYEVRTDRSSYSRDKVERLIFLQNMRGGMFESL
ECCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHH
TTCRLPWVEVGLDLEYYPRFLSAVTGLKWSLDDISVSANRIYTLIRAFWIREYMGWSSSM
HHCCCCHHHCCCCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
DYPPTRWFKHPLTKGPYAGSHLDISKYSEMLKIYYEIRGWDENGVPKKETLIKLGLDFTI
CCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHEEEECCCCCH
PVLEDIVKLR
HHHHHHHHCC
>Mature Secondary Structure
MYMYGWWGKALLIDLTKSKVKEVSIEPDILHGFIGGRGLAVRLLWDLIPPGVDPLSPYNA
CEEEEEECCEEEEEECHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCE
LIVASGPLSGLPLPSSGKLVVASKSPLTNGYGDGNIGSMASHHLKHSGYDALIITGASKK
EEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCC
PVYLYIENGKVDFRSAEDLWGLDTFTTEEKLVREHGRNIGILEIGPAGEHMVRYATVISQ
CEEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH
KGRSGGRPGMGAVMGSKKLKAIVIKGNMEPPIADKEALRKISEESYKKIQGSDNYDYWIR
CCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE
QGTMSTIQWSHQNSVLPTMNFREGMWELYETISGDLMEKLKIDRRGCPYCNMQCGNVVSD
CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
DVGEESELDYENVAMLGSNILLENLKRVAEINKLADKLGVDTISLGNSIGFYMEASERGL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCH
VKERVEWGDFKAVREITIDTAYRRGLGAFIAEGVMRMARSIGGEALDFAMHVKGLEVSAY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHEECCEEEEEE
NCHTTPGMALAYGTSSIGAHHKDAWIISYEVRTDRSSYSRDKVERLIFLQNMRGGMFESL
ECCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHH
TTCRLPWVEVGLDLEYYPRFLSAVTGLKWSLDDISVSANRIYTLIRAFWIREYMGWSSSM
HHCCCCHHHCCCCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
DYPPTRWFKHPLTKGPYAGSHLDISKYSEMLKIYYEIRGWDENGVPKKETLIKLGLDFTI
CCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHEEEECCCCCH
PVLEDIVKLR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7642512 [H]