Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is for [H]
Identifier: 218884286
GI number: 218884286
Start: 921280
End: 923112
Strand: Direct
Name: for [H]
Synonym: DKAM_0975
Alternate gene names: 218884286
Gene position: 921280-923112 (Clockwise)
Preceding gene: 218884284
Following gene: 218884287
Centisome position: 67.48
GC content: 46.04
Gene sequence:
>1833_bases ATGTATATGTATGGCTGGTGGGGTAAGGCACTACTAATAGATTTAACCAAAAGTAAGGTAAAAGAGGTGAGCATAGAGCC AGATATACTACATGGATTCATCGGTGGAAGAGGCCTAGCGGTTAGACTCCTATGGGATCTAATCCCTCCCGGAGTGGATC CGTTATCACCATATAATGCATTAATAGTGGCCTCCGGTCCTCTCTCAGGGCTACCATTACCTAGTAGTGGTAAACTAGTT GTAGCATCTAAGAGCCCGCTGACAAATGGCTATGGGGATGGCAATATAGGTTCCATGGCCAGCCACCACTTAAAGCACAG CGGCTACGATGCACTCATAATCACAGGGGCATCTAAGAAACCCGTCTACCTCTACATTGAAAACGGTAAAGTAGATTTCA GAAGTGCCGAGGATCTATGGGGGCTTGACACCTTCACTACTGAGGAAAAACTGGTTAGAGAACATGGTAGAAACATTGGC ATACTTGAAATCGGGCCGGCGGGAGAGCATATGGTTAGATACGCCACAGTGATCTCCCAGAAGGGGAGAAGCGGAGGGCG CCCAGGCATGGGTGCTGTAATGGGTAGCAAAAAGCTGAAGGCGATAGTGATCAAGGGAAACATGGAGCCACCTATAGCCG ATAAAGAGGCTCTTAGAAAAATATCTGAGGAATCCTATAAGAAGATACAGGGTAGCGATAACTATGATTACTGGATTAGA CAAGGCACAATGTCCACAATACAGTGGAGTCATCAAAACAGCGTCCTACCCACAATGAACTTTAGGGAGGGTATGTGGGA GCTGTATGAAACCATAAGCGGTGATTTAATGGAAAAACTGAAGATAGATAGAAGGGGATGTCCTTACTGTAACATGCAGT GCGGTAATGTTGTTAGTGATGATGTAGGAGAGGAGAGCGAACTAGACTATGAGAACGTAGCGATGCTGGGCAGTAATATA TTATTAGAGAACTTGAAAAGGGTTGCCGAGATAAATAAGCTAGCTGATAAACTAGGGGTAGATACCATAAGTCTAGGCAA CTCGATAGGGTTCTATATGGAAGCTAGCGAGAGAGGGCTAGTCAAAGAGAGAGTTGAATGGGGAGACTTCAAAGCCGTGA GAGAGATAACCATTGATACGGCATATAGACGCGGGCTGGGAGCATTCATAGCTGAAGGAGTTATGAGGATGGCAAGGAGT ATTGGCGGTGAGGCACTCGATTTCGCCATGCATGTGAAGGGTTTAGAGGTATCTGCATACAACTGTCACACAACCCCCGG AATGGCCCTAGCATACGGCACATCTTCTATCGGGGCCCACCACAAGGATGCCTGGATAATAAGCTACGAAGTTAGAACAG ATAGATCATCGTATAGCAGGGACAAGGTTGAACGCTTAATCTTCCTGCAAAACATGCGTGGAGGAATGTTTGAGTCGCTG ACAACATGTAGGCTTCCATGGGTTGAAGTAGGCCTCGACCTCGAGTATTACCCAAGATTCCTTTCAGCTGTAACTGGTTT AAAATGGAGCCTCGACGATATAAGCGTTTCTGCCAACAGGATCTACACGTTGATAAGGGCATTCTGGATACGCGAATACA TGGGTTGGAGTAGCTCGATGGACTACCCGCCTACCAGATGGTTTAAACACCCACTTACAAAAGGACCGTATGCAGGCTCA CACCTAGATATCTCTAAATACAGTGAAATGTTAAAGATATACTATGAAATACGTGGCTGGGATGAAAACGGTGTCCCAAA GAAGGAGACTCTCATAAAGCTGGGGCTAGACTTCACAATACCTGTTCTAGAGGACATTGTGAAGCTACGGTAG
Upstream 100 bases:
>100_bases TATTTAAAGCTGGGGGGATCCCCACAGCAATCATAGATTTCGCCCAGATCATACAAAGCTATAAAGTTTATATCTCTAAA GGCGTTTAATATCTATTGTG
Downstream 100 bases:
>100_bases ATACCTAATATTTTATTTTTAAACAAGTTATCTATAACTCCCCGGTATAACCCAGGGATATCTCAATGCATAGACTCAAG GGTAGAATCGTCACCGGGCT
Product: aldehyde ferredoxin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 610; Mature: 610
Protein sequence:
>610_residues MYMYGWWGKALLIDLTKSKVKEVSIEPDILHGFIGGRGLAVRLLWDLIPPGVDPLSPYNALIVASGPLSGLPLPSSGKLV VASKSPLTNGYGDGNIGSMASHHLKHSGYDALIITGASKKPVYLYIENGKVDFRSAEDLWGLDTFTTEEKLVREHGRNIG ILEIGPAGEHMVRYATVISQKGRSGGRPGMGAVMGSKKLKAIVIKGNMEPPIADKEALRKISEESYKKIQGSDNYDYWIR QGTMSTIQWSHQNSVLPTMNFREGMWELYETISGDLMEKLKIDRRGCPYCNMQCGNVVSDDVGEESELDYENVAMLGSNI LLENLKRVAEINKLADKLGVDTISLGNSIGFYMEASERGLVKERVEWGDFKAVREITIDTAYRRGLGAFIAEGVMRMARS IGGEALDFAMHVKGLEVSAYNCHTTPGMALAYGTSSIGAHHKDAWIISYEVRTDRSSYSRDKVERLIFLQNMRGGMFESL TTCRLPWVEVGLDLEYYPRFLSAVTGLKWSLDDISVSANRIYTLIRAFWIREYMGWSSSMDYPPTRWFKHPLTKGPYAGS HLDISKYSEMLKIYYEIRGWDENGVPKKETLIKLGLDFTIPVLEDIVKLR
Sequences:
>Translated_610_residues MYMYGWWGKALLIDLTKSKVKEVSIEPDILHGFIGGRGLAVRLLWDLIPPGVDPLSPYNALIVASGPLSGLPLPSSGKLV VASKSPLTNGYGDGNIGSMASHHLKHSGYDALIITGASKKPVYLYIENGKVDFRSAEDLWGLDTFTTEEKLVREHGRNIG ILEIGPAGEHMVRYATVISQKGRSGGRPGMGAVMGSKKLKAIVIKGNMEPPIADKEALRKISEESYKKIQGSDNYDYWIR QGTMSTIQWSHQNSVLPTMNFREGMWELYETISGDLMEKLKIDRRGCPYCNMQCGNVVSDDVGEESELDYENVAMLGSNI LLENLKRVAEINKLADKLGVDTISLGNSIGFYMEASERGLVKERVEWGDFKAVREITIDTAYRRGLGAFIAEGVMRMARS IGGEALDFAMHVKGLEVSAYNCHTTPGMALAYGTSSIGAHHKDAWIISYEVRTDRSSYSRDKVERLIFLQNMRGGMFESL TTCRLPWVEVGLDLEYYPRFLSAVTGLKWSLDDISVSANRIYTLIRAFWIREYMGWSSSMDYPPTRWFKHPLTKGPYAGS HLDISKYSEMLKIYYEIRGWDENGVPKKETLIKLGLDFTIPVLEDIVKLR >Mature_610_residues MYMYGWWGKALLIDLTKSKVKEVSIEPDILHGFIGGRGLAVRLLWDLIPPGVDPLSPYNALIVASGPLSGLPLPSSGKLV VASKSPLTNGYGDGNIGSMASHHLKHSGYDALIITGASKKPVYLYIENGKVDFRSAEDLWGLDTFTTEEKLVREHGRNIG ILEIGPAGEHMVRYATVISQKGRSGGRPGMGAVMGSKKLKAIVIKGNMEPPIADKEALRKISEESYKKIQGSDNYDYWIR QGTMSTIQWSHQNSVLPTMNFREGMWELYETISGDLMEKLKIDRRGCPYCNMQCGNVVSDDVGEESELDYENVAMLGSNI LLENLKRVAEINKLADKLGVDTISLGNSIGFYMEASERGLVKERVEWGDFKAVREITIDTAYRRGLGAFIAEGVMRMARS IGGEALDFAMHVKGLEVSAYNCHTTPGMALAYGTSSIGAHHKDAWIISYEVRTDRSSYSRDKVERLIFLQNMRGGMFESL TTCRLPWVEVGLDLEYYPRFLSAVTGLKWSLDDISVSANRIYTLIRAFWIREYMGWSSSMDYPPTRWFKHPLTKGPYAGS HLDISKYSEMLKIYYEIRGWDENGVPKKETLIKLGLDFTIPVLEDIVKLR
Specific function: Catalyzes the oxidation of C1-C3 aldehydes. Involved in peptides fermentation [H]
COG id: COG2414
COG function: function code C; Aldehyde:ferredoxin oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AOR/FOR family [H]
Homologues:
Organism=Escherichia coli, GI1787962, Length=232, Percent_Identity=33.6206896551724, Blast_Score=145, Evalue=6e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013985 - InterPro: IPR013983 - InterPro: IPR001203 [H]
Pfam domain/function: PF01314 AFOR_C; PF02730 AFOR_N [H]
EC number: =1.2.7.5 [H]
Molecular weight: Translated: 68258; Mature: 68258
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYMYGWWGKALLIDLTKSKVKEVSIEPDILHGFIGGRGLAVRLLWDLIPPGVDPLSPYNA CEEEEEECCEEEEEECHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCE LIVASGPLSGLPLPSSGKLVVASKSPLTNGYGDGNIGSMASHHLKHSGYDALIITGASKK EEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCC PVYLYIENGKVDFRSAEDLWGLDTFTTEEKLVREHGRNIGILEIGPAGEHMVRYATVISQ CEEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH KGRSGGRPGMGAVMGSKKLKAIVIKGNMEPPIADKEALRKISEESYKKIQGSDNYDYWIR CCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE QGTMSTIQWSHQNSVLPTMNFREGMWELYETISGDLMEKLKIDRRGCPYCNMQCGNVVSD CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DVGEESELDYENVAMLGSNILLENLKRVAEINKLADKLGVDTISLGNSIGFYMEASERGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCH VKERVEWGDFKAVREITIDTAYRRGLGAFIAEGVMRMARSIGGEALDFAMHVKGLEVSAY HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHEECCEEEEEE NCHTTPGMALAYGTSSIGAHHKDAWIISYEVRTDRSSYSRDKVERLIFLQNMRGGMFESL ECCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHH TTCRLPWVEVGLDLEYYPRFLSAVTGLKWSLDDISVSANRIYTLIRAFWIREYMGWSSSM HHCCCCHHHCCCCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC DYPPTRWFKHPLTKGPYAGSHLDISKYSEMLKIYYEIRGWDENGVPKKETLIKLGLDFTI CCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHEEEECCCCCH PVLEDIVKLR HHHHHHHHCC >Mature Secondary Structure MYMYGWWGKALLIDLTKSKVKEVSIEPDILHGFIGGRGLAVRLLWDLIPPGVDPLSPYNA CEEEEEECCEEEEEECHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCE LIVASGPLSGLPLPSSGKLVVASKSPLTNGYGDGNIGSMASHHLKHSGYDALIITGASKK EEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCC PVYLYIENGKVDFRSAEDLWGLDTFTTEEKLVREHGRNIGILEIGPAGEHMVRYATVISQ CEEEEEECCEEECCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH KGRSGGRPGMGAVMGSKKLKAIVIKGNMEPPIADKEALRKISEESYKKIQGSDNYDYWIR CCCCCCCCCCCHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEE QGTMSTIQWSHQNSVLPTMNFREGMWELYETISGDLMEKLKIDRRGCPYCNMQCGNVVSD CCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DVGEESELDYENVAMLGSNILLENLKRVAEINKLADKLGVDTISLGNSIGFYMEASERGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCCH VKERVEWGDFKAVREITIDTAYRRGLGAFIAEGVMRMARSIGGEALDFAMHVKGLEVSAY HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHEECCEEEEEE NCHTTPGMALAYGTSSIGAHHKDAWIISYEVRTDRSSYSRDKVERLIFLQNMRGGMFESL ECCCCCCCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHH TTCRLPWVEVGLDLEYYPRFLSAVTGLKWSLDDISVSANRIYTLIRAFWIREYMGWSSSM HHCCCCHHHCCCCHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC DYPPTRWFKHPLTKGPYAGSHLDISKYSEMLKIYYEIRGWDENGVPKKETLIKLGLDFTI CCCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCHHHEEEECCCCCH PVLEDIVKLR HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7642512 [H]