Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884282
Identifier: 218884282
GI number: 218884282
Start: 917217
End: 917588
Strand: Direct
Name: 218884282
Synonym: DKAM_0971
Alternate gene names: NA
Gene position: 917217-917588 (Clockwise)
Preceding gene: 218884281
Following gene: 218884283
Centisome position: 67.18
GC content: 44.35
Gene sequence:
>372_bases TTGATAGTAATAGTCTTAAACTCGCTGATCTCGATCTACGGCATAGTGTATAGGAGAAGCCTGGTAAAAAAGCTGATATC GCTAACCATGTTATCTGACACAGTGTTCGTGATATTCATAATGATAGGGTATAGAATAGTCTATCCATCGGTGCCACCTA TATTCACGAGTCTAACCAGTGAAGACCTAGAGTATTTAAGACAACATGCCGTGGACCCCTTGCCCCAAGCCCTCGTGTTA ACAGGCATAGTTATAGGTATGGCTGTGAACGCGTTGATAGCATTCGGCATAATACAAGCATATAAGCTGCAAGGCACAAC CGATGCTAGGAAGCTAGTGGAAGCCGCGTTAAAGGAGGTGCCTGAGGAATGA
Upstream 100 bases:
>100_bases CTGTAGCCTCCGGCTTCACAGCTGTATTCATTTATCTATCATTAGCAGGAGTGGAGAGTGAGGAGAAGTGAGCACTGAGG CTTTTGCCTGGTCTATATTG
Downstream 100 bases:
>100_bases TAGAGGAGCTAGCAGCAGCCCTACTAGTATTCATGGTATACATACTCGTAGCAGGCAGCCTCACACCATACGATATTGCT ACAGGACTATTAGTAAGCGC
Product: Multisubunit Na+/H+ antiporter, MnhC subunit
Products: NA
Alternate protein names: NADH-Ubiquinone Oxidoreductase Subunit 4L; Multisubunit Na+/H+ Antiporter MnhC Subunit; Membrane Bound Hydrogenase MbhG Subunit; Membrane Bound Complex 2 Subunit C; Na(+) H(+) Antiporter Subunit C; Integral Membrane Protein
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MIVIVLNSLISIYGIVYRRSLVKKLISLTMLSDTVFVIFIMIGYRIVYPSVPPIFTSLTSEDLEYLRQHAVDPLPQALVL TGIVIGMAVNALIAFGIIQAYKLQGTTDARKLVEAALKEVPEE
Sequences:
>Translated_123_residues MIVIVLNSLISIYGIVYRRSLVKKLISLTMLSDTVFVIFIMIGYRIVYPSVPPIFTSLTSEDLEYLRQHAVDPLPQALVL TGIVIGMAVNALIAFGIIQAYKLQGTTDARKLVEAALKEVPEE >Mature_123_residues MIVIVLNSLISIYGIVYRRSLVKKLISLTMLSDTVFVIFIMIGYRIVYPSVPPIFTSLTSEDLEYLRQHAVDPLPQALVL TGIVIGMAVNALIAFGIIQAYKLQGTTDARKLVEAALKEVPEE
Specific function: Unknown
COG id: COG1006
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhC subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13624; Mature: 13624
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVIVLNSLISIYGIVYRRSLVKKLISLTMLSDTVFVIFIMIGYRIVYPSVPPIFTSLTS CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EDLEYLRQHAVDPLPQALVLTGIVIGMAVNALIAFGIIQAYKLQGTTDARKLVEAALKEV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC PEE CCC >Mature Secondary Structure MIVIVLNSLISIYGIVYRRSLVKKLISLTMLSDTVFVIFIMIGYRIVYPSVPPIFTSLTS CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH EDLEYLRQHAVDPLPQALVLTGIVIGMAVNALIAFGIIQAYKLQGTTDARKLVEAALKEV HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC PEE CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA