Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884281
Identifier: 218884281
GI number: 218884281
Start: 916450
End: 917187
Strand: Direct
Name: 218884281
Synonym: DKAM_0970
Alternate gene names: NA
Gene position: 916450-917187 (Clockwise)
Preceding gene: 218884280
Following gene: 218884282
Centisome position: 67.13
GC content: 45.12
Gene sequence:
>738_bases ATGGATAGATACCTGGTTTTAATAGTATTACTGGTTTTCACTATTATAAGTGCACTGGTATTAGCATGGCTTAACCTGTT GAATCCACCCACCACAATCAAGACTCTAGGACTCACCTACATAGAGAACACCTACTTCGGCCCATACTCCTCCATGAGCC CTGAAGCCGTCACAGCAATCGTGTGGGACTATAGAGGCTTAGACACAGTGTATGAGACAGCCGTCTTCTTCCTGGCCATT GTAGGTGGGTTAAGCGTCTTCAGAGGGGTTAAAACCAGGGCTTCAACAATGAAGGGGATTGGCCTCACAGGCATCGCCAA GACTTCCACCAAAATAATAGCAGTAATGATTGTAGGTGCATCAGCTAGTATAGCTTTACACGGCCACCTAACACCAGGAG GAGGTTTCCAAGGTGGTTCAACACTTGCCGTGGCATTCCTACTCATCATACCTGTCTTCTCAGTGTATTCACTGCTTAAT ATGAATATAACCTCTGAGAAACTAATAGCAACCCGTGGAATAGCCCTTACAGCGATAGGGACCGTGGCGTTATTACCGGT TTTAAAAAACCTCCCACTTGTATCAAATATCAGCTTCTACCCCTCACACATAGCTGGAATGCTTACCAGTGGAAGCCTCT TCTTCTACAATTTATTCGAGTATATAGCTGTAGCCTCCGGCTTCACAGCTGTATTCATTTATCTATCATTAGCAGGAGTG GAGAGTGAGGAGAAGTGA
Upstream 100 bases:
>100_bases CTACTGACATAGTGTTAACCTATATTGCTGTATCCGTTGGGATCTACTCTGCAGTACTAGTATACGTGATTAGCAAGACC GAGAAGTACGAGGTGTAAAC
Downstream 100 bases:
>100_bases GCACTGAGGCTTTTGCCTGGTCTATATTGTTGATAGTAATAGTCTTAAACTCGCTGATCTCGATCTACGGCATAGTGTAT AGGAGAAGCCTGGTAAAAAA
Product: Multisubunit Na+/H+ antiporter MnhB subunit
Products: NA
Alternate protein names: Na+/H+ Antiporter MnhB Subunit-Like Protein; Multisubunit Na+/H+ Antiporter MnhB Subunit; Na+/H+ Antiporter Family Domain Protein; Monovalent Cation/H+ Antiporter Subunit B; Na+/H+ Antiporter MnhB Subunit; Membrane Bound Complex 1 Subunit D
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MDRYLVLIVLLVFTIISALVLAWLNLLNPPTTIKTLGLTYIENTYFGPYSSMSPEAVTAIVWDYRGLDTVYETAVFFLAI VGGLSVFRGVKTRASTMKGIGLTGIAKTSTKIIAVMIVGASASIALHGHLTPGGGFQGGSTLAVAFLLIIPVFSVYSLLN MNITSEKLIATRGIALTAIGTVALLPVLKNLPLVSNISFYPSHIAGMLTSGSLFFYNLFEYIAVASGFTAVFIYLSLAGV ESEEK
Sequences:
>Translated_245_residues MDRYLVLIVLLVFTIISALVLAWLNLLNPPTTIKTLGLTYIENTYFGPYSSMSPEAVTAIVWDYRGLDTVYETAVFFLAI VGGLSVFRGVKTRASTMKGIGLTGIAKTSTKIIAVMIVGASASIALHGHLTPGGGFQGGSTLAVAFLLIIPVFSVYSLLN MNITSEKLIATRGIALTAIGTVALLPVLKNLPLVSNISFYPSHIAGMLTSGSLFFYNLFEYIAVASGFTAVFIYLSLAGV ESEEK >Mature_245_residues MDRYLVLIVLLVFTIISALVLAWLNLLNPPTTIKTLGLTYIENTYFGPYSSMSPEAVTAIVWDYRGLDTVYETAVFFLAI VGGLSVFRGVKTRASTMKGIGLTGIAKTSTKIIAVMIVGASASIALHGHLTPGGGFQGGSTLAVAFLLIIPVFSVYSLLN MNITSEKLIATRGIALTAIGTVALLPVLKNLPLVSNISFYPSHIAGMLTSGSLFFYNLFEYIAVASGFTAVFIYLSLAGV ESEEK
Specific function: Unknown
COG id: COG2111
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhB subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26118; Mature: 26118
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRYLVLIVLLVFTIISALVLAWLNLLNPPTTIKTLGLTYIENTYFGPYSSMSPEAVTAI CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHEEE VWDYRGLDTVYETAVFFLAIVGGLSVFRGVKTRASTMKGIGLTGIAKTSTKIIAVMIVGA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECC SASIALHGHLTPGGGFQGGSTLAVAFLLIIPVFSVYSLLNMNITSEKLIATRGIALTAIG CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHH TVALLPVLKNLPLVSNISFYPSHIAGMLTSGSLFFYNLFEYIAVASGFTAVFIYLSLAGV HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC ESEEK CCCCC >Mature Secondary Structure MDRYLVLIVLLVFTIISALVLAWLNLLNPPTTIKTLGLTYIENTYFGPYSSMSPEAVTAI CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHEEE VWDYRGLDTVYETAVFFLAIVGGLSVFRGVKTRASTMKGIGLTGIAKTSTKIIAVMIVGA EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECC SASIALHGHLTPGGGFQGGSTLAVAFLLIIPVFSVYSLLNMNITSEKLIATRGIALTAIG CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHH TVALLPVLKNLPLVSNISFYPSHIAGMLTSGSLFFYNLFEYIAVASGFTAVFIYLSLAGV HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC ESEEK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA