Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218884281

Identifier: 218884281

GI number: 218884281

Start: 916450

End: 917187

Strand: Direct

Name: 218884281

Synonym: DKAM_0970

Alternate gene names: NA

Gene position: 916450-917187 (Clockwise)

Preceding gene: 218884280

Following gene: 218884282

Centisome position: 67.13

GC content: 45.12

Gene sequence:

>738_bases
ATGGATAGATACCTGGTTTTAATAGTATTACTGGTTTTCACTATTATAAGTGCACTGGTATTAGCATGGCTTAACCTGTT
GAATCCACCCACCACAATCAAGACTCTAGGACTCACCTACATAGAGAACACCTACTTCGGCCCATACTCCTCCATGAGCC
CTGAAGCCGTCACAGCAATCGTGTGGGACTATAGAGGCTTAGACACAGTGTATGAGACAGCCGTCTTCTTCCTGGCCATT
GTAGGTGGGTTAAGCGTCTTCAGAGGGGTTAAAACCAGGGCTTCAACAATGAAGGGGATTGGCCTCACAGGCATCGCCAA
GACTTCCACCAAAATAATAGCAGTAATGATTGTAGGTGCATCAGCTAGTATAGCTTTACACGGCCACCTAACACCAGGAG
GAGGTTTCCAAGGTGGTTCAACACTTGCCGTGGCATTCCTACTCATCATACCTGTCTTCTCAGTGTATTCACTGCTTAAT
ATGAATATAACCTCTGAGAAACTAATAGCAACCCGTGGAATAGCCCTTACAGCGATAGGGACCGTGGCGTTATTACCGGT
TTTAAAAAACCTCCCACTTGTATCAAATATCAGCTTCTACCCCTCACACATAGCTGGAATGCTTACCAGTGGAAGCCTCT
TCTTCTACAATTTATTCGAGTATATAGCTGTAGCCTCCGGCTTCACAGCTGTATTCATTTATCTATCATTAGCAGGAGTG
GAGAGTGAGGAGAAGTGA

Upstream 100 bases:

>100_bases
CTACTGACATAGTGTTAACCTATATTGCTGTATCCGTTGGGATCTACTCTGCAGTACTAGTATACGTGATTAGCAAGACC
GAGAAGTACGAGGTGTAAAC

Downstream 100 bases:

>100_bases
GCACTGAGGCTTTTGCCTGGTCTATATTGTTGATAGTAATAGTCTTAAACTCGCTGATCTCGATCTACGGCATAGTGTAT
AGGAGAAGCCTGGTAAAAAA

Product: Multisubunit Na+/H+ antiporter MnhB subunit

Products: NA

Alternate protein names: Na+/H+ Antiporter MnhB Subunit-Like Protein; Multisubunit Na+/H+ Antiporter MnhB Subunit; Na+/H+ Antiporter Family Domain Protein; Monovalent Cation/H+ Antiporter Subunit B; Na+/H+ Antiporter MnhB Subunit; Membrane Bound Complex 1 Subunit D

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MDRYLVLIVLLVFTIISALVLAWLNLLNPPTTIKTLGLTYIENTYFGPYSSMSPEAVTAIVWDYRGLDTVYETAVFFLAI
VGGLSVFRGVKTRASTMKGIGLTGIAKTSTKIIAVMIVGASASIALHGHLTPGGGFQGGSTLAVAFLLIIPVFSVYSLLN
MNITSEKLIATRGIALTAIGTVALLPVLKNLPLVSNISFYPSHIAGMLTSGSLFFYNLFEYIAVASGFTAVFIYLSLAGV
ESEEK

Sequences:

>Translated_245_residues
MDRYLVLIVLLVFTIISALVLAWLNLLNPPTTIKTLGLTYIENTYFGPYSSMSPEAVTAIVWDYRGLDTVYETAVFFLAI
VGGLSVFRGVKTRASTMKGIGLTGIAKTSTKIIAVMIVGASASIALHGHLTPGGGFQGGSTLAVAFLLIIPVFSVYSLLN
MNITSEKLIATRGIALTAIGTVALLPVLKNLPLVSNISFYPSHIAGMLTSGSLFFYNLFEYIAVASGFTAVFIYLSLAGV
ESEEK
>Mature_245_residues
MDRYLVLIVLLVFTIISALVLAWLNLLNPPTTIKTLGLTYIENTYFGPYSSMSPEAVTAIVWDYRGLDTVYETAVFFLAI
VGGLSVFRGVKTRASTMKGIGLTGIAKTSTKIIAVMIVGASASIALHGHLTPGGGFQGGSTLAVAFLLIIPVFSVYSLLN
MNITSEKLIATRGIALTAIGTVALLPVLKNLPLVSNISFYPSHIAGMLTSGSLFFYNLFEYIAVASGFTAVFIYLSLAGV
ESEEK

Specific function: Unknown

COG id: COG2111

COG function: function code P; Multisubunit Na+/H+ antiporter, MnhB subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26118; Mature: 26118

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRYLVLIVLLVFTIISALVLAWLNLLNPPTTIKTLGLTYIENTYFGPYSSMSPEAVTAI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHEEE
VWDYRGLDTVYETAVFFLAIVGGLSVFRGVKTRASTMKGIGLTGIAKTSTKIIAVMIVGA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECC
SASIALHGHLTPGGGFQGGSTLAVAFLLIIPVFSVYSLLNMNITSEKLIATRGIALTAIG
CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHH
TVALLPVLKNLPLVSNISFYPSHIAGMLTSGSLFFYNLFEYIAVASGFTAVFIYLSLAGV
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
ESEEK
CCCCC
>Mature Secondary Structure
MDRYLVLIVLLVFTIISALVLAWLNLLNPPTTIKTLGLTYIENTYFGPYSSMSPEAVTAI
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHEEE
VWDYRGLDTVYETAVFFLAIVGGLSVFRGVKTRASTMKGIGLTGIAKTSTKIIAVMIVGA
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECC
SASIALHGHLTPGGGFQGGSTLAVAFLLIIPVFSVYSLLNMNITSEKLIATRGIALTAIG
CCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHH
TVALLPVLKNLPLVSNISFYPSHIAGMLTSGSLFFYNLFEYIAVASGFTAVFIYLSLAGV
HHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCC
ESEEK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA