| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884197
Identifier: 218884197
GI number: 218884197
Start: 850123
End: 850800
Strand: Reverse
Name: 218884197
Synonym: DKAM_0886
Alternate gene names: NA
Gene position: 850800-850123 (Counterclockwise)
Preceding gene: 218884198
Following gene: 218884196
Centisome position: 62.32
GC content: 43.66
Gene sequence:
>678_bases ATGAATAGAGTATATGTAACAGTATTGGCCACCCTATTAATCATAGTAGGACTACTGCTTGGAGCATCAATGTGGCTGGA TATATTAAGAGCAAACACATATGTTGACACTGGTGAACTAGACTGGGAGATCGTGGAAGGGTCAACCATATGGCTGGATG CATGCGGGCTCCAGCCTGGCTTCGGATTCTATAAAGGTAACGACTGGAATGCCACACATCTACCTTCACCAGGCGCTCTC CAGCTTGATAAGGATGTAGGATGTACTCATGTAGCATTGATAGATAGTGATGGCGATGGAGACATGGATACCATGAATGT GACATTGTATAATGTTTATCCATGGTATTATACCCACATAGCCATGAAGGTTCACAATGATGGTTCAATCCCATTGAAGA TATGGAGAGTAATAATAGATGGACAATACTACTACGAGTTGAACGAGCATGTGCTACAACAGGGTGTCGAATTAGATTTA AACAATGATGAAGCACCAGATATATTGATCTGGTGGGGAGACAACTTCGGCACTCAGCTCCATCCCTGTCAATCAGCTGA TATAAGCTTTGATCTAACAGTACTGCAGAGTGCTCCACAGAACACGGTACTTAGTTTCACGATAAGCTTGCAGGCTGTTC AGTGGAACGAGTACAGTGTCCCGGCGCAATCTCCATAA
Upstream 100 bases:
>100_bases ACCAATTCATGTAATACTGGGATCATTAATACATGCTTTTTCAAAGGCAATGGGGCTCATACCCGGACCCATTTAACACA TAGCATTAGGTGTATTAGAT
Downstream 100 bases:
>100_bases GTTGAATATGAGGTGGCTTTAATTGAATAGTCTTTTTTCCCGTAACACCTATCTAATTTCTTTGCTACTTTATGTGTCAT GGATTATTTTCACGGCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MNRVYVTVLATLLIIVGLLLGASMWLDILRANTYVDTGELDWEIVEGSTIWLDACGLQPGFGFYKGNDWNATHLPSPGAL QLDKDVGCTHVALIDSDGDGDMDTMNVTLYNVYPWYYTHIAMKVHNDGSIPLKIWRVIIDGQYYYELNEHVLQQGVELDL NNDEAPDILIWWGDNFGTQLHPCQSADISFDLTVLQSAPQNTVLSFTISLQAVQWNEYSVPAQSP
Sequences:
>Translated_225_residues MNRVYVTVLATLLIIVGLLLGASMWLDILRANTYVDTGELDWEIVEGSTIWLDACGLQPGFGFYKGNDWNATHLPSPGAL QLDKDVGCTHVALIDSDGDGDMDTMNVTLYNVYPWYYTHIAMKVHNDGSIPLKIWRVIIDGQYYYELNEHVLQQGVELDL NNDEAPDILIWWGDNFGTQLHPCQSADISFDLTVLQSAPQNTVLSFTISLQAVQWNEYSVPAQSP >Mature_225_residues MNRVYVTVLATLLIIVGLLLGASMWLDILRANTYVDTGELDWEIVEGSTIWLDACGLQPGFGFYKGNDWNATHLPSPGAL QLDKDVGCTHVALIDSDGDGDMDTMNVTLYNVYPWYYTHIAMKVHNDGSIPLKIWRVIIDGQYYYELNEHVLQQGVELDL NNDEAPDILIWWGDNFGTQLHPCQSADISFDLTVLQSAPQNTVLSFTISLQAVQWNEYSVPAQSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25213; Mature: 25213
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRVYVTVLATLLIIVGLLLGASMWLDILRANTYVDTGELDWEIVEGSTIWLDACGLQPG CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCEEEEEECCCCCC FGFYKGNDWNATHLPSPGALQLDKDVGCTHVALIDSDGDGDMDTMNVTLYNVYPWYYTHI CCCEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEEEEECCEEEEEE AMKVHNDGSIPLKIWRVIIDGQYYYELNEHVLQQGVELDLNNDEAPDILIWWGDNFGTQL EEEEECCCCCCEEEEEEEECCEEEEEHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCEE HPCQSADISFDLTVLQSAPQNTVLSFTISLQAVQWNEYSVPAQSP CCCCCCCCEEEEEEECCCCCCEEEEEEEEEEEEEECCCCCCCCCC >Mature Secondary Structure MNRVYVTVLATLLIIVGLLLGASMWLDILRANTYVDTGELDWEIVEGSTIWLDACGLQPG CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCEEEEEECCCCCC FGFYKGNDWNATHLPSPGALQLDKDVGCTHVALIDSDGDGDMDTMNVTLYNVYPWYYTHI CCCEECCCCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEEEEEECCEEEEEE AMKVHNDGSIPLKIWRVIIDGQYYYELNEHVLQQGVELDLNNDEAPDILIWWGDNFGTQL EEEEECCCCCCEEEEEEEECCEEEEEHHHHHHHCCCEEECCCCCCCEEEEEECCCCCCEE HPCQSADISFDLTVLQSAPQNTVLSFTISLQAVQWNEYSVPAQSP CCCCCCCCEEEEEEECCCCCCEEEEEEEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA