Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884121

Identifier: 218884121

GI number: 218884121

Start: 779245

End: 779592

Strand: Reverse

Name: 218884121

Synonym: DKAM_0810

Alternate gene names: NA

Gene position: 779592-779245 (Counterclockwise)

Preceding gene: 218884122

Following gene: 218884120

Centisome position: 57.1

GC content: 43.1

Gene sequence:

>348_bases
TTGGGGATACTCTTGTCTCAATTATTCGATAAAATCCGTGGAATAGTGTCAAAACATATAAGTGAATCTTCCCAGGGCAT
CATTCTATCTATAAGGGTGAAACCTGGAGATGTAGAAGACTACATAACTATCGAGGGGGATGAACTGGTTTTCCACACAG
CTGAGCAATCAGAGAAAGGCCGGGAGAATGCTGCACTAGTGAAGTACTTGGCAAGGGAGCTGAAGATCCCTGTGTCCAAG
ATAGATATAGTGTATGGTCGTCGTGAAACACTTAAGAAAGTACTACTCAATGATGTGGACCCTGATGAGCTAGTGATTAA
GCTAGCTAAGCTGGTTAGACTCGTGTAG

Upstream 100 bases:

>100_bases
ATAGTGATGTGAAGGCCTTGACCGAGGTGTTGAAGAGTATTTAATCCGGTGGTTAACATGTAGCAAGATTTTTTACTCTT
CACTCTTACTTAAACTATAA

Downstream 100 bases:

>100_bases
TCGTGGAGCCACCTATAATTATTTCTCCTTTATCCAAGCTTTTAACTCAGTGTATAGGACATGGGTGGTTATAGTGGGCG
ATTTTGAAACAAGTAGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MGILLSQLFDKIRGIVSKHISESSQGIILSIRVKPGDVEDYITIEGDELVFHTAEQSEKGRENAALVKYLARELKIPVSK
IDIVYGRRETLKKVLLNDVDPDELVIKLAKLVRLV

Sequences:

>Translated_115_residues
MGILLSQLFDKIRGIVSKHISESSQGIILSIRVKPGDVEDYITIEGDELVFHTAEQSEKGRENAALVKYLARELKIPVSK
IDIVYGRRETLKKVLLNDVDPDELVIKLAKLVRLV
>Mature_114_residues
GILLSQLFDKIRGIVSKHISESSQGIILSIRVKPGDVEDYITIEGDELVFHTAEQSEKGRENAALVKYLARELKIPVSKI
DIVYGRRETLKKVLLNDVDPDELVIKLAKLVRLV

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12939; Mature: 12808

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILLSQLFDKIRGIVSKHISESSQGIILSIRVKPGDVEDYITIEGDELVFHTAEQSEKG
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCEEEEECCHHCCCC
RENAALVKYLARELKIPVSKIDIVYGRRETLKKVLLNDVDPDELVIKLAKLVRLV
CHHHHHHHHHHHHHCCCHHHHHEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GILLSQLFDKIRGIVSKHISESSQGIILSIRVKPGDVEDYITIEGDELVFHTAEQSEKG
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEECCCEEEEECCHHCCCC
RENAALVKYLARELKIPVSKIDIVYGRRETLKKVLLNDVDPDELVIKLAKLVRLV
CHHHHHHHHHHHHHCCCHHHHHEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA