Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is mtaP [H]
Identifier: 218884114
GI number: 218884114
Start: 773515
End: 774237
Strand: Direct
Name: mtaP [H]
Synonym: DKAM_0803
Alternate gene names: 218884114
Gene position: 773515-774237 (Clockwise)
Preceding gene: 218884113
Following gene: 218884115
Centisome position: 56.66
GC content: 51.45
Gene sequence:
>723_bases TTGCCCATACATATTAAGGCTTCCCCAGGCGATATAGCCGAGAACGTTATAGCTGTCGGTGATCCTGGACGCGTAGACAT ACTCTCCGGGCTACTCAGCAACGTTAAAACCGTTAACATCCACCGGGGATTCAAGATAGTTACCGGCTTATATAACGGTG AGAAGGTAACCATCGCGACACACGGGGTAGGTGCCCCGAGTGCCAGCATAGTCTTCGAGGAGCTACGTCAGCTAGGGGCC AAGAGGATAGTCAGGATAGGTACAACCGGTGGTGTGAGAAAAGATACCAGGATAGGTGACGTGATCGTTGCAACTGGTGC AGCATACACGGTCAACGGCTGTGGACTAGGCCAGTACATGCCTGGAATATGCGGCGCCGCCTCACCGGATCCCGTGTTAA CTACAAGGATAATCGAGTCTATGGAGGAGCATGGAATAGAATATAAGAAGGGCCCGGTTTTCTCCAGTGATGCATTCTAC GCTGAAGACCCGTCATTCGCCGAGAGGCTGTCACACTACGGGATTGTTGCAGTGGAAATGGAGGCTGCAGCATTATTCGC GCTTGGCTGGCTAAGGGGTTTTGAGACCGCCTGTGTTCTAGTGGTTAGCGATGTACTCCATGGCGAGGAAGCTATGAAGA AATACTTGACTACGGAGGAGCTGGCCGAGGTCTTCTTAAAGGTTGCGAAGCTGGTTCTCGATGTCTTCCACAAGTATTAT TGA
Upstream 100 bases:
>100_bases TAGGAGGAAAAAGCCTAAAACCTCAAAAACCAAGAGAAAGAAAAGTAAGACAAGGAAAAAGAAAGGCGGGAAGAGTAAGA GGAAGTAGGGGTGTGTCGAC
Downstream 100 bases:
>100_bases AGGATTGGGAGGCATGCTTCCAGCTATAAAAATATATGATACTTTATCCAGGGATTTAAAGGAGCTGCAGCCCATTGAGC CAGGCATAGTTAAAATGTAT
Product: purine and other phosphorylase, family 1
Products: NA
Alternate protein names: 5'-methylthioadenosine phosphorylase; MTA phosphorylase [H]
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MPIHIKASPGDIAENVIAVGDPGRVDILSGLLSNVKTVNIHRGFKIVTGLYNGEKVTIATHGVGAPSASIVFEELRQLGA KRIVRIGTTGGVRKDTRIGDVIVATGAAYTVNGCGLGQYMPGICGAASPDPVLTTRIIESMEEHGIEYKKGPVFSSDAFY AEDPSFAERLSHYGIVAVEMEAAALFALGWLRGFETACVLVVSDVLHGEEAMKKYLTTEELAEVFLKVAKLVLDVFHKYY
Sequences:
>Translated_240_residues MPIHIKASPGDIAENVIAVGDPGRVDILSGLLSNVKTVNIHRGFKIVTGLYNGEKVTIATHGVGAPSASIVFEELRQLGA KRIVRIGTTGGVRKDTRIGDVIVATGAAYTVNGCGLGQYMPGICGAASPDPVLTTRIIESMEEHGIEYKKGPVFSSDAFY AEDPSFAERLSHYGIVAVEMEAAALFALGWLRGFETACVLVVSDVLHGEEAMKKYLTTEELAEVFLKVAKLVLDVFHKYY >Mature_239_residues PIHIKASPGDIAENVIAVGDPGRVDILSGLLSNVKTVNIHRGFKIVTGLYNGEKVTIATHGVGAPSASIVFEELRQLGAK RIVRIGTTGGVRKDTRIGDVIVATGAAYTVNGCGLGQYMPGICGAASPDPVLTTRIIESMEEHGIEYKKGPVFSSDAFYA EDPSFAERLSHYGIVAVEMEAAALFALGWLRGFETACVLVVSDVLHGEEAMKKYLTTEELAEVFLKVAKLVLDVFHKYY
Specific function: Endowed with a broad substrate specificity, being able to phosphorolytically cleave inosine, guanosine, and adenosine with a better efficiency than MTA [H]
COG id: COG2820
COG function: function code F; Uridine phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNP/UDP phosphorylase family [H]
Homologues:
Organism=Escherichia coli, GI1790844, Length=235, Percent_Identity=31.9148936170213, Blast_Score=106, Evalue=2e-24, Organism=Escherichia coli, GI1790265, Length=212, Percent_Identity=29.2452830188679, Blast_Score=85, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018017 - InterPro: IPR018016 - InterPro: IPR000845 [H]
Pfam domain/function: PF01048 PNP_UDP_1 [H]
EC number: =2.4.2.28 [H]
Molecular weight: Translated: 25741; Mature: 25610
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: PS01232 PNP_UDP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIHIKASPGDIAENVIAVGDPGRVDILSGLLSNVKTVNIHRGFKIVTGLYNGEKVTIAT CCEEEECCCCHHHHCEEEECCCCHHHHHHHHHHCCEEEEEECCEEEEEEEECCCEEEEEE HGVGAPSASIVFEELRQLGAKRIVRIGTTGGVRKDTRIGDVIVATGAAYTVNGCGLGQYM CCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECCCEEEECCCCCCHHC PGICGAASPDPVLTTRIIESMEEHGIEYKKGPVFSSDAFYAEDPSFAERLSHYGIVAVEM CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEH EAAALFALGWLRGFETACVLVVSDVLHGEEAMKKYLTTEELAEVFLKVAKLVLDVFHKYY HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PIHIKASPGDIAENVIAVGDPGRVDILSGLLSNVKTVNIHRGFKIVTGLYNGEKVTIAT CEEEECCCCHHHHCEEEECCCCHHHHHHHHHHCCEEEEEECCEEEEEEEECCCEEEEEE HGVGAPSASIVFEELRQLGAKRIVRIGTTGGVRKDTRIGDVIVATGAAYTVNGCGLGQYM CCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEECCCEEEECCCCCCHHC PGICGAASPDPVLTTRIIESMEEHGIEYKKGPVFSSDAFYAEDPSFAERLSHYGIVAVEM CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEH EAAALFALGWLRGFETACVLVVSDVLHGEEAMKKYLTTEELAEVFLKVAKLVLDVFHKYY HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11427726; 7929153 [H]