Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884113
Identifier: 218884113
GI number: 218884113
Start: 772855
End: 773502
Strand: Direct
Name: 218884113
Synonym: DKAM_0802
Alternate gene names: NA
Gene position: 772855-773502 (Clockwise)
Preceding gene: 218884111
Following gene: 218884114
Centisome position: 56.61
GC content: 46.3
Gene sequence:
>648_bases ATGTTTTTGAAGCTGGTCGTAAAGTCTTTCGAGCTATGCCCCTTCGAAGAGGAATCAGATACAGTAAAGGTGAGACTATA TACCAGGGGAGACAGGCACTGGTCCGAGGCGGAGGAACCCGGTTTAAATGTTAAGGAGCAGGGTAATGAAGGCCTACTCG AGAAGATGCTCGAGATGGCCGGCAACCAGTTAACCATGTGGATGACTAGTGAGAAAGACTCAGGGTGCTACAGGTTCATC GATGTTGAGGCTCCGGGAGCAAGCATCACGCTTGGTGAGGGAGCGGTTAAAGACGTTGAGACAATACTTACCCCTAAGCC ATCGCCTTTAATGAGGATACGCATCGTTAAGGTTGAAGAGCCTGAAAAATACCGTGTTATACATGAATTCAAGCCCTCGA AGGAGTCAATAATATATGACGGCTTCATCAACATTAAGAACCCTGATCTCCAGTACGACCTCATACTAATCGATACCACC GATGATACAAGGATACTCCTCCCCCATGAGCTAATCCTATCCCCGTTGAAGCTAAGCAGTGAATCAACCAAGAGGAGAGC TAGGAGGAAAAAGCCTAAAACCTCAAAAACCAAGAGAAAGAAAAGTAAGACAAGGAAAAAGAAAGGCGGGAAGAGTAAGA GGAAGTAG
Upstream 100 bases:
>100_bases TGCAGGGAGACACTCATCCAGGATCCCCCGCCTGGATTATATATTAGGATAGCCAGGAATAAATCTATGCTGTATAAGGC AATAGTATTTGACCTAGGTG
Downstream 100 bases:
>100_bases GGGTGTGTCGACTTGCCCATACATATTAAGGCTTCCCCAGGCGATATAGCCGAGAACGTTATAGCTGTCGGTGATCCTGG ACGCGTAGACATACTCTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MFLKLVVKSFELCPFEEESDTVKVRLYTRGDRHWSEAEEPGLNVKEQGNEGLLEKMLEMAGNQLTMWMTSEKDSGCYRFI DVEAPGASITLGEGAVKDVETILTPKPSPLMRIRIVKVEEPEKYRVIHEFKPSKESIIYDGFINIKNPDLQYDLILIDTT DDTRILLPHELILSPLKLSSESTKRRARRKKPKTSKTKRKKSKTRKKKGGKSKRK
Sequences:
>Translated_215_residues MFLKLVVKSFELCPFEEESDTVKVRLYTRGDRHWSEAEEPGLNVKEQGNEGLLEKMLEMAGNQLTMWMTSEKDSGCYRFI DVEAPGASITLGEGAVKDVETILTPKPSPLMRIRIVKVEEPEKYRVIHEFKPSKESIIYDGFINIKNPDLQYDLILIDTT DDTRILLPHELILSPLKLSSESTKRRARRKKPKTSKTKRKKSKTRKKKGGKSKRK >Mature_215_residues MFLKLVVKSFELCPFEEESDTVKVRLYTRGDRHWSEAEEPGLNVKEQGNEGLLEKMLEMAGNQLTMWMTSEKDSGCYRFI DVEAPGASITLGEGAVKDVETILTPKPSPLMRIRIVKVEEPEKYRVIHEFKPSKESIIYDGFINIKNPDLQYDLILIDTT DDTRILLPHELILSPLKLSSESTKRRARRKKPKTSKTKRKKSKTRKKKGGKSKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24752; Mature: 24752
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: PS00037 MYB_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLKLVVKSFELCPFEEESDTVKVRLYTRGDRHWSEAEEPGLNVKEQGNEGLLEKMLEMA CHHHEEHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC GNQLTMWMTSEKDSGCYRFIDVEAPGASITLGEGAVKDVETILTPKPSPLMRIRIVKVEE CCEEEEEEECCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHCCCCCCEEEEEEEEECC PEKYRVIHEFKPSKESIIYDGFINIKNPDLQYDLILIDTTDDTRILLPHELILSPLKLSS CCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCEEEECHHHHHCCHHCCC ESTKRRARRKKPKTSKTKRKKSKTRKKKGGKSKRK HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MFLKLVVKSFELCPFEEESDTVKVRLYTRGDRHWSEAEEPGLNVKEQGNEGLLEKMLEMA CHHHEEHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC GNQLTMWMTSEKDSGCYRFIDVEAPGASITLGEGAVKDVETILTPKPSPLMRIRIVKVEE CCEEEEEEECCCCCCEEEEEEEECCCCEEEECCCCHHHHHHHHCCCCCCEEEEEEEEECC PEKYRVIHEFKPSKESIIYDGFINIKNPDLQYDLILIDTTDDTRILLPHELILSPLKLSS CCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCEEEECHHHHHCCHHCCC ESTKRRARRKKPKTSKTKRKKSKTRKKKGGKSKRK HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA