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The map label for this gene is 218884110

Identifier: 218884110

GI number: 218884110

Start: 771649

End: 771954

Strand: Direct

Name: 218884110

Synonym: DKAM_0799

Alternate gene names: NA

Gene position: 771649-771954 (Clockwise)

Preceding gene: 218884108

Following gene: 218884111

Centisome position: 56.52

GC content: 45.42

Gene sequence:

>306_bases
GTGTCTAGGCAGCAGAAAAAACATAGCTGGAATCCATATACGAGTGATGTCCAGAGGTTCAGCATATATCCAAGAATACA
GACACCACACGAGGATTCCCTGAGACCAGGCAAGATACTAACCGTTGAAATAGGCGACGTAGACAAACATGGAAACGGGA
TTGTCGACTACAAGGGAGCCAAGATAATAGTTTACAACGCGAGCCTCGGCTCAAAGGTAAAGATAAGGATCACCAAGGTC
AATGACGACGTAGCATACGGGGAAATCCTGGAAGTCCTGAGTGAAGCAAATGAGAAATACCAGTAA

Upstream 100 bases:

>100_bases
AGTCATGGACCTAATAAGCATTAGCGAGGTATAAATATTAATAACCCCTATATGCTTTAATTGATAGGGCAGGTCAACTA
TAGTAGAGCGGGATATAGAC

Downstream 100 bases:

>100_bases
CAATATATTCGTTGAAATAGCCTTGAACCTGGGTGTCGATGTAGCGGAGAAGCTTGAGGCAGGAGAGCGTGTGGAAGGCC
AGCAAGCATGGCTTATAATG

Product: deoxyribonuclease/rho motif-related TRAM

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MSRQQKKHSWNPYTSDVQRFSIYPRIQTPHEDSLRPGKILTVEIGDVDKHGNGIVDYKGAKIIVYNASLGSKVKIRITKV
NDDVAYGEILEVLSEANEKYQ

Sequences:

>Translated_101_residues
MSRQQKKHSWNPYTSDVQRFSIYPRIQTPHEDSLRPGKILTVEIGDVDKHGNGIVDYKGAKIIVYNASLGSKVKIRITKV
NDDVAYGEILEVLSEANEKYQ
>Mature_100_residues
SRQQKKHSWNPYTSDVQRFSIYPRIQTPHEDSLRPGKILTVEIGDVDKHGNGIVDYKGAKIIVYNASLGSKVKIRITKVN
DDVAYGEILEVLSEANEKYQ

Specific function: Unknown

COG id: COG3269

COG function: function code R; Predicted RNA-binding protein, contains TRAM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11490; Mature: 11359

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRQQKKHSWNPYTSDVQRFSIYPRIQTPHEDSLRPGKILTVEIGDVDKHGNGIVDYKGA
CCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCC
KIIVYNASLGSKVKIRITKVNDDVAYGEILEVLSEANEKYQ
EEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SRQQKKHSWNPYTSDVQRFSIYPRIQTPHEDSLRPGKILTVEIGDVDKHGNGIVDYKGA
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCC
KIIVYNASLGSKVKIRITKVNDDVAYGEILEVLSEANEKYQ
EEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA