Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218884108
Identifier: 218884108
GI number: 218884108
Start: 770396
End: 771265
Strand: Direct
Name: 218884108
Synonym: DKAM_0797
Alternate gene names: NA
Gene position: 770396-771265 (Clockwise)
Preceding gene: 218884106
Following gene: 218884110
Centisome position: 56.43
GC content: 44.48
Gene sequence:
>870_bases GTGATCCAGCTAATATGTAAGACTTCACCAGCTTACTGTAGAATAATCGAGGACCTCATCCAGGAAACCGGGTTACCCAT AGTTAGAGTAGAAAAATATAATCCATCACACGGCGAAGCCATCGTATACGCTGGTAAAGTCGATAAAGACCTCAAGGACC TCCTCAACAATATCCATACAGGCAAACACAGGGTAAGACTCCTCATAAGCATCGAACACAACAACATACCCGAAGACGAT GCCGTCGAATCCATCATTGAGAGCCGTAGAAGAGGCACAGGAATACTTATCGTAACACTCACATCAAGAGACCACAGGAT CATCCGGGAAAAACTACCCGGAGTACCAGTAGTCAACATCCCCTTCTACACTATCGGGGGCGGGGAATTAAGGGATCTGA TGCCAAGGGATGGAGGAATAATCACGCACAGCGATAAATGCATGGATATAGTCGAGGTAGCAAGGGAACTGGAAGGCGTA AGGTTCAACCCATTAATCATAAACTACTCTGAGAGGGATTGCGGTAGCACACCATGGATAATAAGTATTACAACCGACGA CCTCTTCAAGCTCACCCAACGCATAATAGCTGGACTCATAATTGATGAGAGCATTGAGAGCCATATAGTATTAAATACGC TATATAACAACACCCGCCCAATCATAGTATGTAGCAATATTGAGACACCCATGGATTCCAAGATAATCATAAAGACCAAG TGTGAACCGGTTAAACTAGTGGAATCAATACTCGAATTATTCAGCAGGATCGAGTACTATAGGAGGATCAGCTCCGAACG CCCCTTGAAAAACAGTTCGGAAAGCATCCTAGGCATCTTAAGGGAGCATTTAACCGGGGGGAAGAATTAA
Upstream 100 bases:
>100_bases ACCAGGCAACCCCTTGTATAATCTATAGTGAACCACTAGTGTTTAAGATATAATATGGCTTCCAGGATCTTTATATATTG TGAACAGGTGTTGAACCATA
Downstream 100 bases:
>100_bases ACAGCTGACGCACACAGTGGAAAACCATTTTACTTCCTCAAGGCTGAAGCTATCTCATCCACGATCCTCGCTAGATCCTC CCGCGATGTCACAGACGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MIQLICKTSPAYCRIIEDLIQETGLPIVRVEKYNPSHGEAIVYAGKVDKDLKDLLNNIHTGKHRVRLLISIEHNNIPEDD AVESIIESRRRGTGILIVTLTSRDHRIIREKLPGVPVVNIPFYTIGGGELRDLMPRDGGIITHSDKCMDIVEVARELEGV RFNPLIINYSERDCGSTPWIISITTDDLFKLTQRIIAGLIIDESIESHIVLNTLYNNTRPIIVCSNIETPMDSKIIIKTK CEPVKLVESILELFSRIEYYRRISSERPLKNSSESILGILREHLTGGKN
Sequences:
>Translated_289_residues MIQLICKTSPAYCRIIEDLIQETGLPIVRVEKYNPSHGEAIVYAGKVDKDLKDLLNNIHTGKHRVRLLISIEHNNIPEDD AVESIIESRRRGTGILIVTLTSRDHRIIREKLPGVPVVNIPFYTIGGGELRDLMPRDGGIITHSDKCMDIVEVARELEGV RFNPLIINYSERDCGSTPWIISITTDDLFKLTQRIIAGLIIDESIESHIVLNTLYNNTRPIIVCSNIETPMDSKIIIKTK CEPVKLVESILELFSRIEYYRRISSERPLKNSSESILGILREHLTGGKN >Mature_289_residues MIQLICKTSPAYCRIIEDLIQETGLPIVRVEKYNPSHGEAIVYAGKVDKDLKDLLNNIHTGKHRVRLLISIEHNNIPEDD AVESIIESRRRGTGILIVTLTSRDHRIIREKLPGVPVVNIPFYTIGGGELRDLMPRDGGIITHSDKCMDIVEVARELEGV RFNPLIINYSERDCGSTPWIISITTDDLFKLTQRIIAGLIIDESIESHIVLNTLYNNTRPIIVCSNIETPMDSKIIIKTK CEPVKLVESILELFSRIEYYRRISSERPLKNSSESILGILREHLTGGKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32700; Mature: 32700
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQLICKTSPAYCRIIEDLIQETGLPIVRVEKYNPSHGEAIVYAGKVDKDLKDLLNNIHT CEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHCC GKHRVRLLISIEHNNIPEDDAVESIIESRRRGTGILIVTLTSRDHRIIREKLPGVPVVNI CCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCEEEC PFYTIGGGELRDLMPRDGGIITHSDKCMDIVEVARELEGVRFNPLIINYSERDCGSTPWI CEEEECCCHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCCEE ISITTDDLFKLTQRIIAGLIIDESIESHIVLNTLYNNTRPIIVCSNIETPMDSKIIIKTK EEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCEEEECCCCCCCCCEEEEEEC CEPVKLVESILELFSRIEYYRRISSERPLKNSSESILGILREHLTGGKN CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIQLICKTSPAYCRIIEDLIQETGLPIVRVEKYNPSHGEAIVYAGKVDKDLKDLLNNIHT CEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHCC GKHRVRLLISIEHNNIPEDDAVESIIESRRRGTGILIVTLTSRDHRIIREKLPGVPVVNI CCEEEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHCCCCCEEEC PFYTIGGGELRDLMPRDGGIITHSDKCMDIVEVARELEGVRFNPLIINYSERDCGSTPWI CEEEECCCHHHHCCCCCCCEEECCHHHHHHHHHHHHHCCCEECCEEEEECCCCCCCCCEE ISITTDDLFKLTQRIIAGLIIDESIESHIVLNTLYNNTRPIIVCSNIETPMDSKIIIKTK EEECCHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHCCCCCEEEECCCCCCCCCEEEEEEC CEPVKLVESILELFSRIEYYRRISSERPLKNSSESILGILREHLTGGKN CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA