Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218884069

Identifier: 218884069

GI number: 218884069

Start: 731191

End: 731862

Strand: Reverse

Name: 218884069

Synonym: DKAM_0758

Alternate gene names: NA

Gene position: 731862-731191 (Counterclockwise)

Preceding gene: 218884070

Following gene: 218884068

Centisome position: 53.61

GC content: 44.79

Gene sequence:

>672_bases
ATGGAGGAAATACCTGTATTCAAGTGCCCGGCTTGCGGACTGTGCTGCACATTTTCACCCGTCTCCATACTGCCCCATGA
AGACGTGGTGCTTGAAATCATAGCTGGGGTACTCGATCTACCTTATAAGAGTCAACCAGGATACACGGTTTACGATGAGA
TCTCGGGTTTGAATATAGCTTTCAGCTATATAATGGAGCTCAACAACGGTAGATGCGTTTTCTTAAGCGGGGTTAGGTGC
CTGATACACGATGTATACAAGCCGCTGATATGTAGGAGCTATCCCTATGTACCCCGTCACGTTAAATACAATATAGATGA
GAGGGGTAGGTATATACTGGCAACAGCTGACTACGGGATAAGCTTAGCCTGCCCAATAGTTAGGAAGGATCGGGGTGTAT
TGGAGAAGTATTCTGAGAACCCCGGTCTAGTAATCAGGTATATGAAGAGGGAATATGAGGCGGCCGTTGAAATGGAGAAT
GCTCGGAACCTATTGTTAGGACTCCTCTCAAAACTATGGAGGGAAGGGTTAGTAGAGTTATCGACAGGTAAGAGAAACGC
GCCTGTGGTAAACCTCTATGAATTTTTGAGGAAATACTACCCGGATCTCCCTAACATGCTTAACATTGATAAAGTCGTTG
AGAAGATTAAACTATTAGAGGAGGAGAAGTAA

Upstream 100 bases:

>100_bases
AGATAATTGAAAGTATAGGAGGAGTGGAGAGAATAAAGATGCTTTACAGTGAGAGGCTACCAGGGTATTATGCCACCGCC
TAGCCGGGATGAGATGTATT

Downstream 100 bases:

>100_bases
ATGAGTAGCGAGCTCGCATTAAAGCTTGAACTGGTGAGAATTCTCTCCGAGCACGACGAGATACCTATCTCCGAAGTGGT
GAGAGAGATAGGTGTACAAC

Product: UPF0153 domain containing protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MEEIPVFKCPACGLCCTFSPVSILPHEDVVLEIIAGVLDLPYKSQPGYTVYDEISGLNIAFSYIMELNNGRCVFLSGVRC
LIHDVYKPLICRSYPYVPRHVKYNIDERGRYILATADYGISLACPIVRKDRGVLEKYSENPGLVIRYMKREYEAAVEMEN
ARNLLLGLLSKLWREGLVELSTGKRNAPVVNLYEFLRKYYPDLPNMLNIDKVVEKIKLLEEEK

Sequences:

>Translated_223_residues
MEEIPVFKCPACGLCCTFSPVSILPHEDVVLEIIAGVLDLPYKSQPGYTVYDEISGLNIAFSYIMELNNGRCVFLSGVRC
LIHDVYKPLICRSYPYVPRHVKYNIDERGRYILATADYGISLACPIVRKDRGVLEKYSENPGLVIRYMKREYEAAVEMEN
ARNLLLGLLSKLWREGLVELSTGKRNAPVVNLYEFLRKYYPDLPNMLNIDKVVEKIKLLEEEK
>Mature_223_residues
MEEIPVFKCPACGLCCTFSPVSILPHEDVVLEIIAGVLDLPYKSQPGYTVYDEISGLNIAFSYIMELNNGRCVFLSGVRC
LIHDVYKPLICRSYPYVPRHVKYNIDERGRYILATADYGISLACPIVRKDRGVLEKYSENPGLVIRYMKREYEAAVEMEN
ARNLLLGLLSKLWREGLVELSTGKRNAPVVNLYEFLRKYYPDLPNMLNIDKVVEKIKLLEEEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25562; Mature: 25562

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEIPVFKCPACGLCCTFSPVSILPHEDVVLEIIAGVLDLPYKSQPGYTVYDEISGLNIA
CCCCCCEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHCCCHHHH
FSYIMELNNGRCVFLSGVRCLIHDVYKPLICRSYPYVPRHVKYNIDERGRYILATADYGI
HHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCC
SLACPIVRKDRGVLEKYSENPGLVIRYMKREYEAAVEMENARNLLLGLLSKLWREGLVEL
EEECHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
STGKRNAPVVNLYEFLRKYYPDLPNMLNIDKVVEKIKLLEEEK
CCCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEEIPVFKCPACGLCCTFSPVSILPHEDVVLEIIAGVLDLPYKSQPGYTVYDEISGLNIA
CCCCCCEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEHHHCCCHHHH
FSYIMELNNGRCVFLSGVRCLIHDVYKPLICRSYPYVPRHVKYNIDERGRYILATADYGI
HHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCC
SLACPIVRKDRGVLEKYSENPGLVIRYMKREYEAAVEMENARNLLLGLLSKLWREGLVEL
EEECHHHHCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
STGKRNAPVVNLYEFLRKYYPDLPNMLNIDKVVEKIKLLEEEK
CCCCCCCCEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA