| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218884057
Identifier: 218884057
GI number: 218884057
Start: 716452
End: 718077
Strand: Direct
Name: 218884057
Synonym: DKAM_0746
Alternate gene names: NA
Gene position: 716452-718077 (Clockwise)
Preceding gene: 218884056
Following gene: 218884059
Centisome position: 52.48
GC content: 42.44
Gene sequence:
>1626_bases ATGAGTGATGAGGAATCATCTTTCACGGTTTTCAGAGCATATCTACTTAGAAGGGAATTTACATGGTTCGATATATTTCT ATGGGTTATAGCTAATCCATTGGCCTCAGGACTCTTATACTACTCTGTATCAGCAACAGGCTCACCCGGGTTTTATGGTG GAGTAGTACCGTACGCCTTCCTATTAGCTGGGCTAATGTTTATTCCCATTGTATTGTCATTCATGATTACTGCTTCATCT CTTCCGCGTAGTGCATCCCCCTATATACTGGTGAGCAGGACCTTCGGAGCGCTTCCAGGTTTTCTCTCTATAGCATTATA CCTGTTTCTAAGCGGGGGATTATTGACCATTGGTTTCCTGGCCTACTCTTCCACAGGGATCTTAAGCGATGGATTTATTA TGAGCGGGTATATCACTAATAATAGTTATCTCACCACGCTCGGGGAGTCACTGAAGAGTGTACTCTTTACAGTCATTATA GCATTTATAATGATTACATTCTTATTCGTCGCAACAATTTTTGGGAGGAGGGTTATAAAAATACTATTATATGTATCCGT GGTAATACCCCTGGTATTATACATAGCTATACTCGTATCACTCTACCCATTCTCCAGCAGGGTCTTCATTAATAACTGGA ACACGTTGTTCAATGACTCCTATGGGAAAATAATAAGTATAGCCCAGTACGGCGGGGTTGTCAATGGAGTAGTCGTTAAT GCGCTTAAACCTGTAAGCGAGTGGAATGCCACGCTTGCGTTGCTCGGTGTAGCTGTGTATGCTTACCTAGGTTTGGAGAA CGCTAGCTTCATAGCTGGTGAGGTTAAAGACCCCGTTAACTCATATTTAAAAGGATACATTACTGGCTTCACTACATTAA TCGCTCTCTATACTGTTACACCAGTTATTATAACGCTTATCGCTGGATATGATTTCCTATCAGCGTACAGCTACCTCTAT CACTACTATCCCGGGGTATTAAAGATTATTATGGGCACTAATACACCTCCTTCACCGAGCCTGGTCACCATTATATCGGT CTACACTGGTAACACTTATACCTCGTTAATCTTCACTGCTGTAGCATACCTGTTCTACTTTGACACTATGCTGACTATCT GGAACAGTGGTATCCGTGTATTGCTTGCGCTGAGCCAAGACCACTTGATGCCGAGGTTCTTGGCTAGGATATCACATAGA ACCGGTGTACCCCACTATTCGAACCTATTCATATACGTGCTCTCAACCCTGATACTACTGTCAACAATCTTCATTAAGTC TAACCTGCAATTAGAGCTCTCATTCCTTAAAATGATAAATCTAGGATACTCGATTTTCCTGGTTTTCATAGGGCTCTCAT TGATCTCTGTACCACTGTTCTCGGAGAAACTGTACAATAGATTTACATATAGAAGCGGGGGGCTACTATACATAGTGGGT TACACATCCTCAACGATTGGATTCGGGTTAGCGCTAACCGTTGGCGCCAATACCTCGCCAACTGATATATTAGTGACTAC ATCGTTATTCGGAGCCATCCTCCTCTTATTTATTGCTGTCACAATATACATGAAGCACCGTGGTGTAAGATACGAGGAGG TATTCTCCAGGATACCTCCAATGTAG
Upstream 100 bases:
>100_bases GGAAATATAATGTTTATTGTTTCACAGAAAATTTATATTCTACAAACATAAATATAGAATCTAGGTGTAATAATAGTTTG AATGGATAGAGGTATGCTAT
Downstream 100 bases:
>100_bases TTCCAGCTAGCTGGCTGAAATCGAGATTTTTGCTAAGACTGAAAGGGTGTCAATCGTTTTTAATTAAATTGATCCCTTAT CAATAGGGGATTGACGCCAA
Product: Amino acid transporter
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 541; Mature: 540
Protein sequence:
>541_residues MSDEESSFTVFRAYLLRREFTWFDIFLWVIANPLASGLLYYSVSATGSPGFYGGVVPYAFLLAGLMFIPIVLSFMITASS LPRSASPYILVSRTFGALPGFLSIALYLFLSGGLLTIGFLAYSSTGILSDGFIMSGYITNNSYLTTLGESLKSVLFTVII AFIMITFLFVATIFGRRVIKILLYVSVVIPLVLYIAILVSLYPFSSRVFINNWNTLFNDSYGKIISIAQYGGVVNGVVVN ALKPVSEWNATLALLGVAVYAYLGLENASFIAGEVKDPVNSYLKGYITGFTTLIALYTVTPVIITLIAGYDFLSAYSYLY HYYPGVLKIIMGTNTPPSPSLVTIISVYTGNTYTSLIFTAVAYLFYFDTMLTIWNSGIRVLLALSQDHLMPRFLARISHR TGVPHYSNLFIYVLSTLILLSTIFIKSNLQLELSFLKMINLGYSIFLVFIGLSLISVPLFSEKLYNRFTYRSGGLLYIVG YTSSTIGFGLALTVGANTSPTDILVTTSLFGAILLLFIAVTIYMKHRGVRYEEVFSRIPPM
Sequences:
>Translated_541_residues MSDEESSFTVFRAYLLRREFTWFDIFLWVIANPLASGLLYYSVSATGSPGFYGGVVPYAFLLAGLMFIPIVLSFMITASS LPRSASPYILVSRTFGALPGFLSIALYLFLSGGLLTIGFLAYSSTGILSDGFIMSGYITNNSYLTTLGESLKSVLFTVII AFIMITFLFVATIFGRRVIKILLYVSVVIPLVLYIAILVSLYPFSSRVFINNWNTLFNDSYGKIISIAQYGGVVNGVVVN ALKPVSEWNATLALLGVAVYAYLGLENASFIAGEVKDPVNSYLKGYITGFTTLIALYTVTPVIITLIAGYDFLSAYSYLY HYYPGVLKIIMGTNTPPSPSLVTIISVYTGNTYTSLIFTAVAYLFYFDTMLTIWNSGIRVLLALSQDHLMPRFLARISHR TGVPHYSNLFIYVLSTLILLSTIFIKSNLQLELSFLKMINLGYSIFLVFIGLSLISVPLFSEKLYNRFTYRSGGLLYIVG YTSSTIGFGLALTVGANTSPTDILVTTSLFGAILLLFIAVTIYMKHRGVRYEEVFSRIPPM >Mature_540_residues SDEESSFTVFRAYLLRREFTWFDIFLWVIANPLASGLLYYSVSATGSPGFYGGVVPYAFLLAGLMFIPIVLSFMITASSL PRSASPYILVSRTFGALPGFLSIALYLFLSGGLLTIGFLAYSSTGILSDGFIMSGYITNNSYLTTLGESLKSVLFTVIIA FIMITFLFVATIFGRRVIKILLYVSVVIPLVLYIAILVSLYPFSSRVFINNWNTLFNDSYGKIISIAQYGGVVNGVVVNA LKPVSEWNATLALLGVAVYAYLGLENASFIAGEVKDPVNSYLKGYITGFTTLIALYTVTPVIITLIAGYDFLSAYSYLYH YYPGVLKIIMGTNTPPSPSLVTIISVYTGNTYTSLIFTAVAYLFYFDTMLTIWNSGIRVLLALSQDHLMPRFLARISHRT GVPHYSNLFIYVLSTLILLSTIFIKSNLQLELSFLKMINLGYSIFLVFIGLSLISVPLFSEKLYNRFTYRSGGLLYIVGY TSSTIGFGLALTVGANTSPTDILVTTSLFGAILLLFIAVTIYMKHRGVRYEEVFSRIPPM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59786; Mature: 59655
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEESSFTVFRAYLLRREFTWFDIFLWVIANPLASGLLYYSVSATGSPGFYGGVVPYAF CCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHH LLAGLMFIPIVLSFMITASSLPRSASPYILVSRTFGALPGFLSIALYLFLSGGLLTIGFL HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHCCCHHHHHHHHHHHHHCCHHHHHHH AYSSTGILSDGFIMSGYITNNSYLTTLGESLKSVLFTVIIAFIMITFLFVATIFGRRVIK HHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLYVSVVIPLVLYIAILVSLYPFSSRVFINNWNTLFNDSYGKIISIAQYGGVVNGVVVN HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCHHEEEHHHHCCHHHHHHHH ALKPVSEWNATLALLGVAVYAYLGLENASFIAGEVKDPVNSYLKGYITGFTTLIALYTVT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH PVIITLIAGYDFLSAYSYLYHYYPGVLKIIMGTNTPPSPSLVTIISVYTGNTYTSLIFTA HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHH VAYLFYFDTMLTIWNSGIRVLLALSQDHLMPRFLARISHRTGVPHYSNLFIYVLSTLILL HHHHHHHHHHHHHHHCCHHEEEEECHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH STIFIKSNLQLELSFLKMINLGYSIFLVFIGLSLISVPLFSEKLYNRFTYRSGGLLYIVG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE YTSSTIGFGLALTVGANTSPTDILVTTSLFGAILLLFIAVTIYMKHRGVRYEEVFSRIPP CCCCCCCCCEEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC M C >Mature Secondary Structure SDEESSFTVFRAYLLRREFTWFDIFLWVIANPLASGLLYYSVSATGSPGFYGGVVPYAF CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHHH LLAGLMFIPIVLSFMITASSLPRSASPYILVSRTFGALPGFLSIALYLFLSGGLLTIGFL HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECHHCCCHHHHHHHHHHHHHCCHHHHHHH AYSSTGILSDGFIMSGYITNNSYLTTLGESLKSVLFTVIIAFIMITFLFVATIFGRRVIK HHCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILLYVSVVIPLVLYIAILVSLYPFSSRVFINNWNTLFNDSYGKIISIAQYGGVVNGVVVN HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHCCCCHHEEEHHHHCCHHHHHHHH ALKPVSEWNATLALLGVAVYAYLGLENASFIAGEVKDPVNSYLKGYITGFTTLIALYTVT HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH PVIITLIAGYDFLSAYSYLYHYYPGVLKIIMGTNTPPSPSLVTIISVYTGNTYTSLIFTA HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCEEEEEEEECCCHHHHHHHHH VAYLFYFDTMLTIWNSGIRVLLALSQDHLMPRFLARISHRTGVPHYSNLFIYVLSTLILL HHHHHHHHHHHHHHHCCHHEEEEECHHCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH STIFIKSNLQLELSFLKMINLGYSIFLVFIGLSLISVPLFSEKLYNRFTYRSGGLLYIVG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE YTSSTIGFGLALTVGANTSPTDILVTTSLFGAILLLFIAVTIYMKHRGVRYEEVFSRIPP CCCCCCCCCEEEEECCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCC M C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA