| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is gnpTA [H]
Identifier: 218883988
GI number: 218883988
Start: 648260
End: 649264
Strand: Direct
Name: gnpTA [H]
Synonym: DKAM_0677
Alternate gene names: 218883988
Gene position: 648260-649264 (Clockwise)
Preceding gene: 218883987
Following gene: 218883990
Centisome position: 47.48
GC content: 46.47
Gene sequence:
>1005_bases GTGAGAGATGATGTTTTAAGCTATCTAATACCCGTCTTGGTGGCGGCAGCAACCACTAGTATACTGCTCGAATGGTGGGT TAGAACAGGTTTAAGGCTGGGTTTCAAGGGCAGGGATATGAATAAGCCTGGAGAACACTATGCTGTTGAAGCGGGTGGTA TGTGGGTTCTTCTGGGAGCCGTCTTCGGGATCCTATCCTTCATGGCGCTGAGTACCTATGTCCAGGGCGACTCCGGGATC ATCACCTATCTTGCTGTATCACAGGTACTCTTGCTAGCCGGTCTCCTAGGCTTGATGGATGACTTGTTAGGGTGGAAGAA GGGTTTGAGTCAAGTTAAAAGAGTAATATTAACTATCCCAATAGCATTTCCACTAATGGTGGTGAAAGCCGGGTACTCCA CGATAGAGCTTCCCCTAATAGGCGTCCTAGACCTAGGCTTGCTCTACCCGTTGGTAGTAATCCCTGTTGGAGTCATGGGG GCTAGTAACGCCTTCAATATGATAGCTGGATATAACGGGTTAGAGGCATCACAGGCTCTTGTGATCTCATTGGTGAGCCT CCTATTTGCCTTGAAGAAGGGTATCTGGGTTGTTGTACCGCTTTTATTGGTAATGATCGCGTCTATAATAGTGTTCCTAA GGTATAACTGGTACCCGGCGAAGGTTTTCCCTGGGAATACATTCACTTATGGTTTTGGTGCATTCTACGCCTCCGTGGTA ATATATGGTAACTTCGAGAAATTCGGGCTGATAATATTTACACCCTACTTTATCGAGTTAGCCTTGTTTCTAAGGGGGCT TATTCATGGTGTCTACAAGGAGAACTTCGGGAGACCCAGTATTGAGGGGTGTCTTGATCCCCCGTATAGCAGAGCTTACA GTCTAACACATGTAGCACTGATAGTCATGAAAAAGTTGAAGAGGTGTGCAAGGGAAACTGATGTAGTATTGTTTACGGCC CTGATACAGGTAGCGATAGGAGTCTTAGCCCTCATAGTAATGTAG
Upstream 100 bases:
>100_bases GTTACTCAGTGTTGAAGGCATTGGCGAGAAACGGGCTGAGGAGATATACTTATTATTCAACACGCCTTGGAGTAGTAATG GGGAAGGGGTGGAGTAAAGA
Downstream 100 bases:
>100_bases GTGGATCACTATTTACCCGCAGGTGCTTGCCAGTTCCTCTAGATCGAGGAAATGACTTCTAATTAAGTGTATGTATAAGG CATGCCTCCAGTATCTTGGA
Product: glycosyl transferase, family 4
Products: NA
Alternate protein names: GlcNAc-1-P transferase; G1PT; GPT; N-acetylglucosamine-1-phosphate transferase [H]
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MRDDVLSYLIPVLVAAATTSILLEWWVRTGLRLGFKGRDMNKPGEHYAVEAGGMWVLLGAVFGILSFMALSTYVQGDSGI ITYLAVSQVLLLAGLLGLMDDLLGWKKGLSQVKRVILTIPIAFPLMVVKAGYSTIELPLIGVLDLGLLYPLVVIPVGVMG ASNAFNMIAGYNGLEASQALVISLVSLLFALKKGIWVVVPLLLVMIASIIVFLRYNWYPAKVFPGNTFTYGFGAFYASVV IYGNFEKFGLIIFTPYFIELALFLRGLIHGVYKENFGRPSIEGCLDPPYSRAYSLTHVALIVMKKLKRCARETDVVLFTA LIQVAIGVLALIVM
Sequences:
>Translated_334_residues MRDDVLSYLIPVLVAAATTSILLEWWVRTGLRLGFKGRDMNKPGEHYAVEAGGMWVLLGAVFGILSFMALSTYVQGDSGI ITYLAVSQVLLLAGLLGLMDDLLGWKKGLSQVKRVILTIPIAFPLMVVKAGYSTIELPLIGVLDLGLLYPLVVIPVGVMG ASNAFNMIAGYNGLEASQALVISLVSLLFALKKGIWVVVPLLLVMIASIIVFLRYNWYPAKVFPGNTFTYGFGAFYASVV IYGNFEKFGLIIFTPYFIELALFLRGLIHGVYKENFGRPSIEGCLDPPYSRAYSLTHVALIVMKKLKRCARETDVVLFTA LIQVAIGVLALIVM >Mature_334_residues MRDDVLSYLIPVLVAAATTSILLEWWVRTGLRLGFKGRDMNKPGEHYAVEAGGMWVLLGAVFGILSFMALSTYVQGDSGI ITYLAVSQVLLLAGLLGLMDDLLGWKKGLSQVKRVILTIPIAFPLMVVKAGYSTIELPLIGVLDLGLLYPLVVIPVGVMG ASNAFNMIAGYNGLEASQALVISLVSLLFALKKGIWVVVPLLLVMIASIIVFLRYNWYPAKVFPGNTFTYGFGAFYASVV IYGNFEKFGLIIFTPYFIELALFLRGLIHGVYKENFGRPSIEGCLDPPYSRAYSLTHVALIVMKKLKRCARETDVVLFTA LIQVAIGVLALIVM
Specific function: Unknown
COG id: COG0472
COG function: function code M; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 4 family [H]
Homologues:
Organism=Homo sapiens, GI42794009, Length=306, Percent_Identity=28.7581699346405, Blast_Score=84, Evalue=2e-16, Organism=Caenorhabditis elegans, GI193209164, Length=206, Percent_Identity=31.5533980582524, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000715 [H]
Pfam domain/function: PF00953 Glycos_transf_4 [H]
EC number: =2.7.8.15 [H]
Molecular weight: Translated: 36540; Mature: 36540
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDDVLSYLIPVLVAAATTSILLEWWVRTGLRLGFKGRDMNKPGEHYAVEAGGMWVLLGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEECCCHHHHHHH VFGILSFMALSTYVQGDSGIITYLAVSQVLLLAGLLGLMDDLLGWKKGLSQVKRVILTIP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAFPLMVVKAGYSTIELPLIGVLDLGLLYPLVVIPVGVMGASNAFNMIAGYNGLEASQAL HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHH VISLVSLLFALKKGIWVVVPLLLVMIASIIVFLRYNWYPAKVFPGNTFTYGFGAFYASVV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEECEECCCCCEEHHHHHHHHHHH IYGNFEKFGLIIFTPYFIELALFLRGLIHGVYKENFGRPSIEGCLDPPYSRAYSLTHVAL EEECHHHCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH IVMKKLKRCARETDVVLFTALIQVAIGVLALIVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MRDDVLSYLIPVLVAAATTSILLEWWVRTGLRLGFKGRDMNKPGEHYAVEAGGMWVLLGA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCEEEECCCHHHHHHH VFGILSFMALSTYVQGDSGIITYLAVSQVLLLAGLLGLMDDLLGWKKGLSQVKRVILTIP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAFPLMVVKAGYSTIELPLIGVLDLGLLYPLVVIPVGVMGASNAFNMIAGYNGLEASQAL HHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCHHHHH VISLVSLLFALKKGIWVVVPLLLVMIASIIVFLRYNWYPAKVFPGNTFTYGFGAFYASVV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCEECEECCCCCEEHHHHHHHHHHH IYGNFEKFGLIIFTPYFIELALFLRGLIHGVYKENFGRPSIEGCLDPPYSRAYSLTHVAL EEECHHHCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH IVMKKLKRCARETDVVLFTALIQVAIGVLALIVM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8182085 [H]