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The map label for this gene is 218883964

Identifier: 218883964

GI number: 218883964

Start: 629175

End: 629600

Strand: Direct

Name: 218883964

Synonym: DKAM_0653

Alternate gene names: NA

Gene position: 629175-629600 (Clockwise)

Preceding gene: 218883961

Following gene: 218883967

Centisome position: 46.09

GC content: 43.43

Gene sequence:

>426_bases
ATGGGTAAGGATACCCTTGTGATAGTCATGGGTGGCAGGAAAATAGGCATTTATTTACCAGGGGATCTCGAAGAATTGGT
CATTGAATACCTGAAGAGACATGGTGGTAGAAGCATTAGCTCACTGGTTCAGGAAGCCCTTAGGACCTATTTAATGAGTG
AGGAGATACCTGGGTGCAACCTAGTCGGCTATATAATGGTTCTATATAAACATGGTATGGGAGACATTGATAGAGAGCTC
ACTGAAATCCAGCACGAGTACATTGGCTCGGTACTCTTTGAGAACCACATTCACATCGATGAGGAGAGATGTTTAATGAC
TATCGCTTTTAGGGGTAGATACAGCGATTTTGAGTCGCTGATGAAAAAGGTTAGGAGTCTGCGTGGTATGATCCTGGTTA
AACACCTATGTGTATGCGTTGACTAG

Upstream 100 bases:

>100_bases
TGAGGAGCGGTCCCCCGGTCCGTGAATCAATCATCAATCATTTAGGAGGGCTCCGGTCATTCCATGGTAATGATATGTGT
GAAAAAGGTAATTAATCTTA

Downstream 100 bases:

>100_bases
CTTTACAAATGAAAGCCTCGCTCTTTTAGAGCTGGGGGGAGGTTAGTGCTCGGAAAAACTTTTTTTCGCCAGGTACTCGC
GTATCTTTGAGATCGTTACG

Product: putative CopG family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MGKDTLVIVMGGRKIGIYLPGDLEELVIEYLKRHGGRSISSLVQEALRTYLMSEEIPGCNLVGYIMVLYKHGMGDIDREL
TEIQHEYIGSVLFENHIHIDEERCLMTIAFRGRYSDFESLMKKVRSLRGMILVKHLCVCVD

Sequences:

>Translated_141_residues
MGKDTLVIVMGGRKIGIYLPGDLEELVIEYLKRHGGRSISSLVQEALRTYLMSEEIPGCNLVGYIMVLYKHGMGDIDREL
TEIQHEYIGSVLFENHIHIDEERCLMTIAFRGRYSDFESLMKKVRSLRGMILVKHLCVCVD
>Mature_140_residues
GKDTLVIVMGGRKIGIYLPGDLEELVIEYLKRHGGRSISSLVQEALRTYLMSEEIPGCNLVGYIMVLYKHGMGDIDRELT
EIQHEYIGSVLFENHIHIDEERCLMTIAFRGRYSDFESLMKKVRSLRGMILVKHLCVCVD

Specific function: Transcriptional regulator (Potential) [H]

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR010985
- InterPro:   IPR014864 [H]

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 16149; Mature: 16018

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKDTLVIVMGGRKIGIYLPGDLEELVIEYLKRHGGRSISSLVQEALRTYLMSEEIPGCN
CCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCH
LVGYIMVLYKHGMGDIDRELTEIQHEYIGSVLFENHIHIDEERCLMTIAFRGRYSDFESL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEHHCCCCCHHHHHH
MKKVRSLRGMILVKHLCVCVD
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKDTLVIVMGGRKIGIYLPGDLEELVIEYLKRHGGRSISSLVQEALRTYLMSEEIPGCN
CCCEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCH
LVGYIMVLYKHGMGDIDRELTEIQHEYIGSVLFENHIHIDEERCLMTIAFRGRYSDFESL
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEHHCCCCCHHHHHH
MKKVRSLRGMILVKHLCVCVD
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA