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The map label for this gene is 218883961

Identifier: 218883961

GI number: 218883961

Start: 625307

End: 626872

Strand: Direct

Name: 218883961

Synonym: DKAM_0650

Alternate gene names: NA

Gene position: 625307-626872 (Clockwise)

Preceding gene: 218883960

Following gene: 218883964

Centisome position: 45.8

GC content: 43.36

Gene sequence:

>1566_bases
ATGATAAGTAAAATAGTAATCCTGGATGGATACACCGACGAGCCAGCAGGCCTTGGAGTACCTCCATACATAAACACTTA
TCCGAGGCTCGTTGCGGGTGCAGTATGGAATAGGGTGAAGGATGCCGATATAAAATACTGGACGATAGATGATGCAAGAA
GGAACTTTGGTTCATTTATAAAACAGGCAAGGGAAAGCCAGCTCCTAGTCGTCATAGGAGGAGCTGAAGTACCTGGTAAA
TACCTTGGAGGCAAGCCACTAAGTATACAGGAGCTTGAAACAATACTGCTCTTAACTAAGGATGTAAACAGGATCCTCAT
AGGTCCAGCGGCCAGTCATGGATTCGGGAGTGGGGGAGGAAATATAGCTGTAGAAACAGGGAGGTTGAGGAATTTATTCA
CGGAAATAGTGAGAGGCGATCCAGAGATATATATTGACGAGTTAATACAATACGGCTTCGAGAAGGCCCGTCCATGGCTG
CTCAGAGAGGACTACGAATTAGCGGATAAAGCGTTTAGGCTGGGGGCTAAAATAGTCCTCCAACATCCTAACTACGGTAG
AAATCTCGTTGTTGAGATAGAGACGTATAGAGGTTGCAGCAGGTGGATAACAGGAGGTTGCTCATTCTGTATTGAACCCA
GACATGGAAGACCGTTAATGAGGAGCTTGAAGGGTATTATTGAGGAGGTGGAAGCATTATATAGGCTAGGAGTTAGACAC
ATCAGGCTGGGAAAGCAGCCTGATATATTGGCATACATGGCTAGGGACATCGGTAAACAGGTGTTTCCACGTCCGGATCC
CGAGGTTATTGAAAGACTTTTCCAAGGAATAAGAAACGTTGCACCTGGATTGATCACATTACATATAGATAATGTAAACC
CAGGTACAATAGTGCATTACCCTGAGGAATCGATTAGAATACTTAAGACAATAGTGAAATATCATACACCCGGAGACGTT
GCGGCTCTGGGAATAGAGAGCTTCGATGAAAAAGTGGTTAATATAAATAACTTGAAAGTGTACCCTGATGAAGCGTTGGA
GGCTATACGCTTAATAAATAGGGTTGGAAGGGAAAGAGGATGGAATGGCATGCCCCATCTACTGCCTGGAATAAACCTCA
TTTATGGTTTGCCAGGTGAATCAAGGAATACCTACCACATGAATCTAGAGTATTTAACCAAGATAATTAGAGAAGGGTTG
ATGGTAAGAAGGCTGAACATACGTAGAGTAGCTGTTCTAGAGAACACGCCTTTATGGTTGAGGAGAGATGAGGTTGAATA
CTTGCTTAAGAAGTACAGGGATCTCTATAGGTTCCACCGGGCAAGAGTAATGCAGTTATTTGATAAGATAATGTTAAAGA
GGATACTTCCCCCTGGTACAATACTCTATTATCTCATAGCTGAGAAAAAATCATCAAGCCATACAATAGCCAGGTTCCCA
GGTAGTTACCCTATCGCTGTCAAGGTTAAGGGGGAGATACCTTTATGGAGTATCCTAGCTGTAAGGGTGAAGAGATACTC
AGCTAAAAGCGTGTCTGGTGAACCTATATCTCTTAGAAACCTCTGA

Upstream 100 bases:

>100_bases
CCCCGAACAACCCGTATGGACCATGCATGGTTAGCTCCGAGGGTACTTGTAGAATATGGGCTGAAAACATGCCTGTGCTA
CATGGAGCGGTGTTGCAGTA

Downstream 100 bases:

>100_bases
GCACTAGAGGTATTTACCGTTTTTCTCAATGATTTTTACCTCTACCTCCCCGTCTTTCTCATCTAATATTATCTCGGGAG
CACCATAGATGAGGTTGTGC

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MISKIVILDGYTDEPAGLGVPPYINTYPRLVAGAVWNRVKDADIKYWTIDDARRNFGSFIKQARESQLLVVIGGAEVPGK
YLGGKPLSIQELETILLLTKDVNRILIGPAASHGFGSGGGNIAVETGRLRNLFTEIVRGDPEIYIDELIQYGFEKARPWL
LREDYELADKAFRLGAKIVLQHPNYGRNLVVEIETYRGCSRWITGGCSFCIEPRHGRPLMRSLKGIIEEVEALYRLGVRH
IRLGKQPDILAYMARDIGKQVFPRPDPEVIERLFQGIRNVAPGLITLHIDNVNPGTIVHYPEESIRILKTIVKYHTPGDV
AALGIESFDEKVVNINNLKVYPDEALEAIRLINRVGRERGWNGMPHLLPGINLIYGLPGESRNTYHMNLEYLTKIIREGL
MVRRLNIRRVAVLENTPLWLRRDEVEYLLKKYRDLYRFHRARVMQLFDKIMLKRILPPGTILYYLIAEKKSSSHTIARFP
GSYPIAVKVKGEIPLWSILAVRVKRYSAKSVSGEPISLRNL

Sequences:

>Translated_521_residues
MISKIVILDGYTDEPAGLGVPPYINTYPRLVAGAVWNRVKDADIKYWTIDDARRNFGSFIKQARESQLLVVIGGAEVPGK
YLGGKPLSIQELETILLLTKDVNRILIGPAASHGFGSGGGNIAVETGRLRNLFTEIVRGDPEIYIDELIQYGFEKARPWL
LREDYELADKAFRLGAKIVLQHPNYGRNLVVEIETYRGCSRWITGGCSFCIEPRHGRPLMRSLKGIIEEVEALYRLGVRH
IRLGKQPDILAYMARDIGKQVFPRPDPEVIERLFQGIRNVAPGLITLHIDNVNPGTIVHYPEESIRILKTIVKYHTPGDV
AALGIESFDEKVVNINNLKVYPDEALEAIRLINRVGRERGWNGMPHLLPGINLIYGLPGESRNTYHMNLEYLTKIIREGL
MVRRLNIRRVAVLENTPLWLRRDEVEYLLKKYRDLYRFHRARVMQLFDKIMLKRILPPGTILYYLIAEKKSSSHTIARFP
GSYPIAVKVKGEIPLWSILAVRVKRYSAKSVSGEPISLRNL
>Mature_521_residues
MISKIVILDGYTDEPAGLGVPPYINTYPRLVAGAVWNRVKDADIKYWTIDDARRNFGSFIKQARESQLLVVIGGAEVPGK
YLGGKPLSIQELETILLLTKDVNRILIGPAASHGFGSGGGNIAVETGRLRNLFTEIVRGDPEIYIDELIQYGFEKARPWL
LREDYELADKAFRLGAKIVLQHPNYGRNLVVEIETYRGCSRWITGGCSFCIEPRHGRPLMRSLKGIIEEVEALYRLGVRH
IRLGKQPDILAYMARDIGKQVFPRPDPEVIERLFQGIRNVAPGLITLHIDNVNPGTIVHYPEESIRILKTIVKYHTPGDV
AALGIESFDEKVVNINNLKVYPDEALEAIRLINRVGRERGWNGMPHLLPGINLIYGLPGESRNTYHMNLEYLTKIIREGL
MVRRLNIRRVAVLENTPLWLRRDEVEYLLKKYRDLYRFHRARVMQLFDKIMLKRILPPGTILYYLIAEKKSSSHTIARFP
GSYPIAVKVKGEIPLWSILAVRVKRYSAKSVSGEPISLRNL

Specific function: Unknown

COG id: COG1031

COG function: function code C; Uncharacterized Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197
- InterPro:   IPR002792 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 59244; Mature: 59244

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISKIVILDGYTDEPAGLGVPPYINTYPRLVAGAVWNRVKDADIKYWTIDDARRNFGSFI
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
KQARESQLLVVIGGAEVPGKYLGGKPLSIQELETILLLTKDVNRILIGPAASHGFGSGGG
HHHCCCCEEEEECCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
NIAVETGRLRNLFTEIVRGDPEIYIDELIQYGFEKARPWLLREDYELADKAFRLGAKIVL
CEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCHHHCCCCEECCCHHHHHHHHHCCCEEEE
QHPNYGRNLVVEIETYRGCSRWITGGCSFCIEPRHGRPLMRSLKGIIEEVEALYRLGVRH
ECCCCCCEEEEEEECCCCHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCHHH
IRLGKQPDILAYMARDIGKQVFPRPDPEVIERLFQGIRNVAPGLITLHIDNVNPGTIVHY
EECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEC
PEESIRILKTIVKYHTPGDVAALGIESFDEKVVNINNLKVYPDEALEAIRLINRVGRERG
CHHHHHHHHHHHHHCCCCCCEEECHHHHCCCEEEECCEEECCHHHHHHHHHHHHHHHHCC
WNGMPHLLPGINLIYGLPGESRNTYHMNLEYLTKIIREGLMVRRLNIRRVAVLENTPLWL
CCCCCCHHCCCEEEEECCCCCCCEEEEEHHHHHHHHHCCHHEEEECCEEEEEEECCCCEE
RRDEVEYLLKKYRDLYRFHRARVMQLFDKIMLKRILPPGTILYYLIAEKKSSSHTIARFP
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECC
GSYPIAVKVKGEIPLWSILAVRVKRYSAKSVSGEPISLRNL
CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEECCCC
>Mature Secondary Structure
MISKIVILDGYTDEPAGLGVPPYINTYPRLVAGAVWNRVKDADIKYWTIDDARRNFGSFI
CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH
KQARESQLLVVIGGAEVPGKYLGGKPLSIQELETILLLTKDVNRILIGPAASHGFGSGGG
HHHCCCCEEEEECCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
NIAVETGRLRNLFTEIVRGDPEIYIDELIQYGFEKARPWLLREDYELADKAFRLGAKIVL
CEEEECCHHHHHHHHHHCCCCHHHHHHHHHHCHHHCCCCEECCCHHHHHHHHHCCCEEEE
QHPNYGRNLVVEIETYRGCSRWITGGCSFCIEPRHGRPLMRSLKGIIEEVEALYRLGVRH
ECCCCCCEEEEEEECCCCHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCHHH
IRLGKQPDILAYMARDIGKQVFPRPDPEVIERLFQGIRNVAPGLITLHIDNVNPGTIVHY
EECCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEC
PEESIRILKTIVKYHTPGDVAALGIESFDEKVVNINNLKVYPDEALEAIRLINRVGRERG
CHHHHHHHHHHHHHCCCCCCEEECHHHHCCCEEEECCEEECCHHHHHHHHHHHHHHHHCC
WNGMPHLLPGINLIYGLPGESRNTYHMNLEYLTKIIREGLMVRRLNIRRVAVLENTPLWL
CCCCCCHHCCCEEEEECCCCCCCEEEEEHHHHHHHHHCCHHEEEECCEEEEEEECCCCEE
RRDEVEYLLKKYRDLYRFHRARVMQLFDKIMLKRILPPGTILYYLIAEKKSSSHTIARFP
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEECC
GSYPIAVKVKGEIPLWSILAVRVKRYSAKSVSGEPISLRNL
CCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]