Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 218883940

GI number:

Start: 599291

End: 600523

Strand: Direct

Name: Not Available

Synonym: DKAM_0629

Alternate gene names: NA

Gene position: NA

Preceding gene: 218883939

Following gene: 218883941

Centisome position: NA

GC content: NA

Gene sequence:

>1233_bases
TTGACTATTTCTCAAATACATGAGATAGCTAAAAAGATACTTGTTGATAGTATCAAGTTCCCCACTGTGCTTGGAGAAAC
CTATGAGGATATGGTTGACTATTACCGGGAGCAGTTATCGGAATATGGTATCCATGTGACAATACACAGGGTTCCCGATG
AATTCCTTAGGAAGACTCTTCCCAGGGAGTTCAACCCTGAGAAACCCAGGTTCATATTGCTGGCTAGAATAGGTAGCGGT
GAAAAGGTACTTCAATTCAATGGACATTATGATGTAGTATCACCGGGAGAGGGCTGGGAGACGCCGCCCTTCGAGCCCGT
TGTCAGGGATGATCTAGTATATGGGCGTGGCACAACGGATATGAAGGGTGGGATAGCGTCTATACTTACAGCCCTCATAT
CTCTTGCACAGGAGAGAAGAGAGCCAAGTGTAATTATCGAGGCCGCTCTTGTACCGGATGAAGAGATAGGGGGTAGGACT
GGCACAGGCTACCTGGTTAACGAGCTTGGTAGTAGGCCTGACTATGTTATCATAGCTGAACCCTCCGGCTTAGATAACAT
CTATATCGGTCATAGAGGAAATGTATGGGGTATCATAAGGGTACATGGTAAGCAGGCTCACGGCTCAGCACCGTGGCTTG
GAGACAACGCGTTCGAGAAGATGCTTGTGTTCGCGCAGGAATTCCTTAAGAGATATAGGGAGCGGGTTTCCTCCAGGAAG
AGTAACTACCTATACGAGGATGAAAGAGCAGCCTATCCCACGATTACACCGGGTGGACTCTTGATCGCACCTGGATCGAT
AAACATAGTGCCTGGAACAGCTGGTTTCAGCATAGATAGGAGGTTGATAGTTGAGGAGAGGGTTGAGGATGTGATTGGAG
AAATCCAGGAATTACTTGGTCAGGTCAGCAGGGAGCTCAATATAGATTCATCATTCACACTTGTAGAGTCCTCGCCGTCA
GCGTTCACCCCGCCTGATAACAAGTACACTCAAATACTCGGTGAGATCATAAGGGAGAATACTGGTAGAGAACCTAGGAA
AACCATATGTATTGGTGGGCTGGATTTGAGATACTATACAATTAAAGGAATACCAGCCGTATCATACGGACCAGGCGAGG
TGGGGCTAGCTCATAAACCCAATGAATACATTAGGATAAGCGATGTAGTAAGGGTTAGCAAGATATATGTCGACTTTGCT
AAGAGATTTGAGAAAATCCAGGTTGATACCTAG

Upstream 100 bases:

>100_bases
GCAGGATGCAGCTAATGCATGTCCTGTTCAAATAATACATGTTGAAAAAGCCTAGTTTTTTTAAAACTAACCATCCAACC
CCATCTTTAGGGGATGCTCC

Downstream 100 bases:

>100_bases
AATTGAGTAGCGGGAGTAGATTCGAGCTGACCTCCTCCCAGCTCTAAAGGGTTGGGGTTCCCTTTAGGGCGGGGGTTCCC
CACATCTATTCGGGGATACA

Product: succinyl-diaminopimelate desuccinylase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>410_residues
MTISQIHEIAKKILVDSIKFPTVLGETYEDMVDYYREQLSEYGIHVTIHRVPDEFLRKTLPREFNPEKPRFILLARIGSG
EKVLQFNGHYDVVSPGEGWETPPFEPVVRDDLVYGRGTTDMKGGIASILTALISLAQERREPSVIIEAALVPDEEIGGRT
GTGYLVNELGSRPDYVIIAEPSGLDNIYIGHRGNVWGIIRVHGKQAHGSAPWLGDNAFEKMLVFAQEFLKRYRERVSSRK
SNYLYEDERAAYPTITPGGLLIAPGSINIVPGTAGFSIDRRLIVEERVEDVIGEIQELLGQVSRELNIDSSFTLVESSPS
AFTPPDNKYTQILGEIIRENTGREPRKTICIGGLDLRYYTIKGIPAVSYGPGEVGLAHKPNEYIRISDVVRVSKIYVDFA
KRFEKIQVDT

Sequences:
NA

Specific function: NA

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA