| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883938
Identifier: 218883938
GI number: 218883938
Start: 598127
End: 598912
Strand: Reverse
Name: 218883938
Synonym: DKAM_0627
Alternate gene names: NA
Gene position: 598912-598127 (Counterclockwise)
Preceding gene: 218883944
Following gene: 218883933
Centisome position: 43.87
GC content: 44.4
Gene sequence:
>786_bases TTGAACAAGGTAATCGCGATCCTTAGCGCTGGAACCATTGGAAGCATACTGAAAATACTTGGAGGCATACTCTACGGTAG TAATACATTGTTCGTTGATGCCTTAACAAGCATTGCAAACATGATAGCACTACTCGTGGTGATATGGTCAAGAAGGGTGG TCACTATACCGCCCGACTCTGATCATCACTTCGGGCACGAACGCTTCGAGTACATTGGTATACTCGTAATGATTGTGACC TATGGTTTTGTAGCAGGCATCAGCATCACCCGTTTATATTATGTGAGAGAATACAGTGTAGAACTTAATGCATTCTACTT AGCAGTTACAGCCATCCTAGCATACTCTATTGCCATATTCTTATCGAGGAGTGCCCCTCCATCTATTAGGGCATACGGCG CATTCACTATAAGTGAGGTTCTAGAAGGCGTAGTGGGCATTATAGCCAGCCTAGGCGGCGCGCTATACAGCTATCTAATA GATTATGGAGGCGCCGTATTACTCACCTCCTATATTTTCTACGAGATATATGAGGAGGGGCGTAACCTAACATCATTCAT GGCTGATGAGGCACCACCGCCAAGCATCTACGAGAAAATAGTGGGAATAGCTGAGTCTGAGGGTTTCTCAATTAAATCCA TAAGGCTTAGAACAATAGTGCCCGGTAAGTATCACGGGGACATAGTACTAAGTCCTGGGAGCACCAGGTATGAAAACCTG AAGAATTTAAAGAAAAAACTCGGTGAGAACGGTGTGGATGTATGTATAGAGGTGTCTAGCCCTTAA
Upstream 100 bases:
>100_bases TAGCCTAGCACCATCGATATAATAACTCGTCATAGGTTATAAAAATATCGAGTCATATGGGGTAAGGATTTAATGCTAGA CAGGGCTGGGGGGAACGCTT
Downstream 100 bases:
>100_bases ATAACTCAACGTAATAGCTATACAACCCCTGGACAATCATCTCAACTGCTACACCGGAGATAATCAACGCCATGAATCTA CCTATAGCGCGCACAGTAGA
Product: Cation efflux protein
Products: NA
Alternate protein names: Cation Efflux Protein; Cation Efflux Protein CzrB; Co/Zn/Cd Cation Transporter
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MNKVIAILSAGTIGSILKILGGILYGSNTLFVDALTSIANMIALLVVIWSRRVVTIPPDSDHHFGHERFEYIGILVMIVT YGFVAGISITRLYYVREYSVELNAFYLAVTAILAYSIAIFLSRSAPPSIRAYGAFTISEVLEGVVGIIASLGGALYSYLI DYGGAVLLTSYIFYEIYEEGRNLTSFMADEAPPPSIYEKIVGIAESEGFSIKSIRLRTIVPGKYHGDIVLSPGSTRYENL KNLKKKLGENGVDVCIEVSSP
Sequences:
>Translated_261_residues MNKVIAILSAGTIGSILKILGGILYGSNTLFVDALTSIANMIALLVVIWSRRVVTIPPDSDHHFGHERFEYIGILVMIVT YGFVAGISITRLYYVREYSVELNAFYLAVTAILAYSIAIFLSRSAPPSIRAYGAFTISEVLEGVVGIIASLGGALYSYLI DYGGAVLLTSYIFYEIYEEGRNLTSFMADEAPPPSIYEKIVGIAESEGFSIKSIRLRTIVPGKYHGDIVLSPGSTRYENL KNLKKKLGENGVDVCIEVSSP >Mature_261_residues MNKVIAILSAGTIGSILKILGGILYGSNTLFVDALTSIANMIALLVVIWSRRVVTIPPDSDHHFGHERFEYIGILVMIVT YGFVAGISITRLYYVREYSVELNAFYLAVTAILAYSIAIFLSRSAPPSIRAYGAFTISEVLEGVVGIIASLGGALYSYLI DYGGAVLLTSYIFYEIYEEGRNLTSFMADEAPPPSIYEKIVGIAESEGFSIKSIRLRTIVPGKYHGDIVLSPGSTRYENL KNLKKKLGENGVDVCIEVSSP
Specific function: Unknown
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28455; Mature: 28455
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKVIAILSAGTIGSILKILGGILYGSNTLFVDALTSIANMIALLVVIWSRRVVTIPPDS CCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC DHHFGHERFEYIGILVMIVTYGFVAGISITRLYYVREYSVELNAFYLAVTAILAYSIAIF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHHHHH LSRSAPPSIRAYGAFTISEVLEGVVGIIASLGGALYSYLIDYGGAVLLTSYIFYEIYEEG HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC RNLTSFMADEAPPPSIYEKIVGIAESEGFSIKSIRLRTIVPGKYHGDIVLSPGSTRYENL CCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEECCCCHHHHHH KNLKKKLGENGVDVCIEVSSP HHHHHHHCCCCCEEEEEECCC >Mature Secondary Structure MNKVIAILSAGTIGSILKILGGILYGSNTLFVDALTSIANMIALLVVIWSRRVVTIPPDS CCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCCCC DHHFGHERFEYIGILVMIVTYGFVAGISITRLYYVREYSVELNAFYLAVTAILAYSIAIF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHCCHHHHHHHHHHHHHHHHHHHH LSRSAPPSIRAYGAFTISEVLEGVVGIIASLGGALYSYLIDYGGAVLLTSYIFYEIYEEG HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC RNLTSFMADEAPPPSIYEKIVGIAESEGFSIKSIRLRTIVPGKYHGDIVLSPGSTRYENL CCHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEECCCCHHHHHH KNLKKKLGENGVDVCIEVSSP HHHHHHHCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA