Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is porA [H]

Identifier: 218883890

GI number: 218883890

Start: 540885

End: 542144

Strand: Reverse

Name: porA [H]

Synonym: DKAM_0579

Alternate gene names: 218883890

Gene position: 542144-540885 (Counterclockwise)

Preceding gene: 218883891

Following gene: 218883889

Centisome position: 39.71

GC content: 46.51

Gene sequence:

>1260_bases
ATGGAGAAAACCGTGTTCAAGCCGAAGATCCCTATTGAGAAACAGGTTTTAACAACCGCTAATGGTGATGAAGCAGTAGC
CTACGCTGTAAAGCAGAGCTACGTAGATGTGGTGGCAGCATACCCTATAACACCCCAGACAATTATTGTTGAAAAATACT
CGGAGTTCGTTAATGATGGATTAGTACACACGGAGTTCATACCGGTTGAATCAGAGCACTCAGCTATGAGTGCTTGCGTA
GGTGCGGCAGCGGCTGGTGCCAGAGCTTTCACGGCCACATCATCCCAGGGATTGGCGTTAATGGTTGAAATAGTATATAT
AGCATCAGCCCTAAGACTACCAATAGTTATGGCGGTTGTCAACAGGGCTCTCTCAGCACCGATAAACATACATAATGATC
ACAGTGATGCATACCTGATGAGGGACTCTGGATGGATACAGTTATTCGTGGAAAACGTACAAGAGACGTATGATACCACT
ATACAGGCATTCAAGATAGCGGAGGATCCACGTGTACAACTACCTGTCGCCGTAAACCTTGACGGGTTCTTCCTAAGCCA
CACCCTGGAGAACTTCTACATGTTACCGGATGACACGGTCTATGAGTTCCTAGGAGGTCCGAGGAAACTGGTAAACGTTA
AAGTAGACTATTTCAGCGAGGAAGTACCACTAGTGCTAAACCCGGCCAGGCCTTTAACATTCGGCTCACTGGATCTATAC
GATTATTACTTTGAACATAAAGTCCAGCAGGTGGAAGCCATGAAGAATGTACCTCCTGTTGTAAGGGAGATAAATGAAGA
ATGGTATAAGCTAACGGGCAGGAGATATGGTGATGGAGTAGTAGATGCATATGGCGTGGAGGACGCCGACATAGTGATTG
TTGCGATGGGTAGTGGGGCAGGCACAATCAGGAGTGTTGTGAAGAAGCTAAGAGAAAAGGGGGAGAAGATAGGATTGCTA
AAGATAAGGATGTTCAGGCCCTTCCCATACAGTGATGTAGCAGAAATACTCTCAGGCGCTAAAATAGTGGCTGTAATGGA
TAAAGCTATAGGACCCGGCTCGTTTGGCGCGCTATACGAGGATATAGCGGCAAGTCTATATGATCTCGATGAGAGACCAC
TGCTACTCGACTACATCTACGGCCTAGGAGGGAGAGACCTGCCACCCTCACTAGTCTACAGGATGATTGAAGAAGTAAAG
AAAGACCTAGAGTCCAAAAGTGTTGAAAGGAAGATAAGGTACTTAGGGGTGAGGGAGTAG

Upstream 100 bases:

>100_bases
AGGTAAACCTGGATTACTGTAAAGGTTGTGGGATATGTGCTCACGAATGCCCTGTCAAAGCTATATCAATGGTACCCGAG
TTTGAGGAGGTGTAAGCGTG

Downstream 100 bases:

>100_bases
CCATGACGGTTCAAACTCTGCCAGAATTCCCTGTTAAAAAGGGTGAGCCAGCATACAAGGTATGGATTTTCGAACCGGGT
TGGAAGGGCGAGATACCGTT

Product: Pyruvate synthase subunit porA

Products: NA

Alternate protein names: Pyruvate oxidoreductase alpha chain; POR; Pyruvic-ferredoxin oxidoreductase subunit alpha [H]

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MEKTVFKPKIPIEKQVLTTANGDEAVAYAVKQSYVDVVAAYPITPQTIIVEKYSEFVNDGLVHTEFIPVESEHSAMSACV
GAAAAGARAFTATSSQGLALMVEIVYIASALRLPIVMAVVNRALSAPINIHNDHSDAYLMRDSGWIQLFVENVQETYDTT
IQAFKIAEDPRVQLPVAVNLDGFFLSHTLENFYMLPDDTVYEFLGGPRKLVNVKVDYFSEEVPLVLNPARPLTFGSLDLY
DYYFEHKVQQVEAMKNVPPVVREINEEWYKLTGRRYGDGVVDAYGVEDADIVIVAMGSGAGTIRSVVKKLREKGEKIGLL
KIRMFRPFPYSDVAEILSGAKIVAVMDKAIGPGSFGALYEDIAASLYDLDERPLLLDYIYGLGGRDLPPSLVYRMIEEVK
KDLESKSVERKIRYLGVRE

Sequences:

>Translated_419_residues
MEKTVFKPKIPIEKQVLTTANGDEAVAYAVKQSYVDVVAAYPITPQTIIVEKYSEFVNDGLVHTEFIPVESEHSAMSACV
GAAAAGARAFTATSSQGLALMVEIVYIASALRLPIVMAVVNRALSAPINIHNDHSDAYLMRDSGWIQLFVENVQETYDTT
IQAFKIAEDPRVQLPVAVNLDGFFLSHTLENFYMLPDDTVYEFLGGPRKLVNVKVDYFSEEVPLVLNPARPLTFGSLDLY
DYYFEHKVQQVEAMKNVPPVVREINEEWYKLTGRRYGDGVVDAYGVEDADIVIVAMGSGAGTIRSVVKKLREKGEKIGLL
KIRMFRPFPYSDVAEILSGAKIVAVMDKAIGPGSFGALYEDIAASLYDLDERPLLLDYIYGLGGRDLPPSLVYRMIEEVK
KDLESKSVERKIRYLGVRE
>Mature_419_residues
MEKTVFKPKIPIEKQVLTTANGDEAVAYAVKQSYVDVVAAYPITPQTIIVEKYSEFVNDGLVHTEFIPVESEHSAMSACV
GAAAAGARAFTATSSQGLALMVEIVYIASALRLPIVMAVVNRALSAPINIHNDHSDAYLMRDSGWIQLFVENVQETYDTT
IQAFKIAEDPRVQLPVAVNLDGFFLSHTLENFYMLPDDTVYEFLGGPRKLVNVKVDYFSEEVPLVLNPARPLTFGSLDLY
DYYFEHKVQQVEAMKNVPPVVREINEEWYKLTGRRYGDGVVDAYGVEDADIVIVAMGSGAGTIRSVVKKLREKGEKIGLL
KIRMFRPFPYSDVAEILSGAKIVAVMDKAIGPGSFGALYEDIAASLYDLDERPLLLDYIYGLGGRDLPPSLVYRMIEEVK
KDLESKSVERKIRYLGVRE

Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]

COG id: COG0674

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787642, Length=398, Percent_Identity=30.4020100502513, Blast_Score=154, Evalue=9e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002880
- InterPro:   IPR009014
- InterPro:   IPR015941 [H]

Pfam domain/function: PF01855 POR_N [H]

EC number: =1.2.7.1 [H]

Molecular weight: Translated: 46614; Mature: 46614

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTVFKPKIPIEKQVLTTANGDEAVAYAVKQSYVDVVAAYPITPQTIIVEKYSEFVNDG
CCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCC
LVHTEFIPVESEHSAMSACVGAAAAGARAFTATSSQGLALMVEIVYIASALRLPIVMAVV
CEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
NRALSAPINIHNDHSDAYLMRDSGWIQLFVENVQETYDTTIQAFKIAEDPRVQLPVAVNL
HHHHHCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECC
DGFFLSHTLENFYMLPDDTVYEFLGGPRKLVNVKVDYFSEEVPLVLNPARPLTFGSLDLY
CHHHHHHHHHHEEECCCHHHHHHHCCCEEEEEEEEECCCCCCCEEECCCCCCEECCHHHH
DYYFEHKVQQVEAMKNVPPVVREINEEWYKLTGRRYGDGVVDAYGVEDADIVIVAMGSGA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEEECCCC
GTIRSVVKKLREKGEKIGLLKIRMFRPFPYSDVAEILSGAKIVAVMDKAIGPGSFGALYE
HHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHCCCEEEEEHHHCCCCCCHHHHHH
DIAASLYDLDERPLLLDYIYGLGGRDLPPSLVYRMIEEVKKDLESKSVERKIRYLGVRE
HHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEKTVFKPKIPIEKQVLTTANGDEAVAYAVKQSYVDVVAAYPITPQTIIVEKYSEFVNDG
CCCCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHCC
LVHTEFIPVESEHSAMSACVGAAAAGARAFTATSSQGLALMVEIVYIASALRLPIVMAVV
CEEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
NRALSAPINIHNDHSDAYLMRDSGWIQLFVENVQETYDTTIQAFKIAEDPRVQLPVAVNL
HHHHHCCCEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEEECC
DGFFLSHTLENFYMLPDDTVYEFLGGPRKLVNVKVDYFSEEVPLVLNPARPLTFGSLDLY
CHHHHHHHHHHEEECCCHHHHHHHCCCEEEEEEEEECCCCCCCEEECCCCCCEECCHHHH
DYYFEHKVQQVEAMKNVPPVVREINEEWYKLTGRRYGDGVVDAYGVEDADIVIVAMGSGA
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEEECCCC
GTIRSVVKKLREKGEKIGLLKIRMFRPFPYSDVAEILSGAKIVAVMDKAIGPGSFGALYE
HHHHHHHHHHHHCCCEEEEEEEEEECCCCHHHHHHHHCCCEEEEEHHHCCCCCCHHHHHH
DIAASLYDLDERPLLLDYIYGLGGRDLPPSLVYRMIEEVKKDLESKSVERKIRYLGVRE
HHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8550425; 10360571; 8305426 [H]