| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883871
Identifier: 218883871
GI number: 218883871
Start: 522633
End: 523469
Strand: Reverse
Name: 218883871
Synonym: DKAM_0560
Alternate gene names: NA
Gene position: 523469-522633 (Counterclockwise)
Preceding gene: 218883872
Following gene: 218883870
Centisome position: 38.34
GC content: 43.01
Gene sequence:
>837_bases GTGATTCGAGGCGCTAAGTACGTGAACGCGGTTTTAGAAACAACAACGCTACTCATGAACAAGCTTCGCGCCCTTCTCAA CATACTTCTTCAATACGTTAACTTTGACAGCCTTGAGGAGGCGTACAAAGTTGTTTTTGAGTTGTTCTATCAAGCTTCAC GTCACAAACCCTTTTTACTGAAGAATTTACATAAAGATGCTCGCTTATCGGGAATGCTACAATACGCTGAAGAACTCCTA AGCGATGTCTATGAAGTAATTAGTGAGCGCAACATTGATGTCCTCGAATTAGCGCGTGAAATGTTTCGAAGAGCTAGTGC CGAGCTTGCTGAGGCCTCAAAAAGCGCGTCGAAATATGTGATCGTTTGCGATGGACTATCTATTATCGACGCTTTGTACA TAGCTTGCAGATTAAAAAGAGAAGGGGCGGAACTCTTCATAGCCCCAATAATTAATCCTGGTGGTGCTACGGAGACATAC AAGTTCATACTCGAACCGCATAGCTATATTCAAAATGCCGATCTCACTCTTAACGATATTGCTCGTAGAATAGCCGAAAA AATGCGCGCAAAGCACTATATCGTTTTTAGAGATTACGATGAGTCCATTCACCAGTTAAAGAGCGTCCGTGCCAGCGATA TTATAGGGACAATGTACACGCTGACTTCTAAGTTGTACAGCAAGATTACTCAGTTGAAGGGGGGTTTTGGCAGCACTATA ATCATGCTCTCAGATCACGGCTACGATATTGTAGAGAAGGAAGGAGGGTTGTACGATGTAAATCACTCCTGGAGCCCTCG GTCTCTTAGCGTAATTGCTTCATTACTAATAGTATAA
Upstream 100 bases:
>100_bases TACAGCTAGCTAAATTATATGAAAAGGATGAAGCCTTGCAAATGGTTAAGAGCATGGGACTGTCGCCTGGTGGGGTTAGG CTTATAGAAAGTCGAGAGCA
Downstream 100 bases:
>100_bases GGGTGACGGTATGGGCAAGGGCTTGTACTATTTGATATACGTGGGTGATGGTGAAAGAGGTGAGCTGAGCCTACGGGGAT TGACCCCGGATTCGAGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MIRGAKYVNAVLETTTLLMNKLRALLNILLQYVNFDSLEEAYKVVFELFYQASRHKPFLLKNLHKDARLSGMLQYAEELL SDVYEVISERNIDVLELAREMFRRASAELAEASKSASKYVIVCDGLSIIDALYIACRLKREGAELFIAPIINPGGATETY KFILEPHSYIQNADLTLNDIARRIAEKMRAKHYIVFRDYDESIHQLKSVRASDIIGTMYTLTSKLYSKITQLKGGFGSTI IMLSDHGYDIVEKEGGLYDVNHSWSPRSLSVIASLLIV
Sequences:
>Translated_278_residues MIRGAKYVNAVLETTTLLMNKLRALLNILLQYVNFDSLEEAYKVVFELFYQASRHKPFLLKNLHKDARLSGMLQYAEELL SDVYEVISERNIDVLELAREMFRRASAELAEASKSASKYVIVCDGLSIIDALYIACRLKREGAELFIAPIINPGGATETY KFILEPHSYIQNADLTLNDIARRIAEKMRAKHYIVFRDYDESIHQLKSVRASDIIGTMYTLTSKLYSKITQLKGGFGSTI IMLSDHGYDIVEKEGGLYDVNHSWSPRSLSVIASLLIV >Mature_278_residues MIRGAKYVNAVLETTTLLMNKLRALLNILLQYVNFDSLEEAYKVVFELFYQASRHKPFLLKNLHKDARLSGMLQYAEELL SDVYEVISERNIDVLELAREMFRRASAELAEASKSASKYVIVCDGLSIIDALYIACRLKREGAELFIAPIINPGGATETY KFILEPHSYIQNADLTLNDIARRIAEKMRAKHYIVFRDYDESIHQLKSVRASDIIGTMYTLTSKLYSKITQLKGGFGSTI IMLSDHGYDIVEKEGGLYDVNHSWSPRSLSVIASLLIV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31543; Mature: 31543
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRGAKYVNAVLETTTLLMNKLRALLNILLQYVNFDSLEEAYKVVFELFYQASRHKPFLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHH KNLHKDARLSGMLQYAEELLSDVYEVISERNIDVLELAREMFRRASAELAEASKSASKYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE IVCDGLSIIDALYIACRLKREGAELFIAPIINPGGATETYKFILEPHSYIQNADLTLNDI EEECCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHCCHHHHHCCCCCCHHHH ARRIAEKMRAKHYIVFRDYDESIHQLKSVRASDIIGTMYTLTSKLYSKITQLKGGFGSTI HHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IMLSDHGYDIVEKEGGLYDVNHSWSPRSLSVIASLLIV EEEECCCCEEEECCCCEEECCCCCCCHHHHHHHHHHHC >Mature Secondary Structure MIRGAKYVNAVLETTTLLMNKLRALLNILLQYVNFDSLEEAYKVVFELFYQASRHKPFLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHH KNLHKDARLSGMLQYAEELLSDVYEVISERNIDVLELAREMFRRASAELAEASKSASKYV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEE IVCDGLSIIDALYIACRLKREGAELFIAPIINPGGATETYKFILEPHSYIQNADLTLNDI EEECCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHCCHHHHHCCCCCCHHHH ARRIAEKMRAKHYIVFRDYDESIHQLKSVRASDIIGTMYTLTSKLYSKITQLKGGFGSTI HHHHHHHHHHHEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE IMLSDHGYDIVEKEGGLYDVNHSWSPRSLSVIASLLIV EEEECCCCEEEECCCCEEECCCCCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA