| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883854
Identifier: 218883854
GI number: 218883854
Start: 509134
End: 509742
Strand: Reverse
Name: 218883854
Synonym: DKAM_0543
Alternate gene names: NA
Gene position: 509742-509134 (Counterclockwise)
Preceding gene: 218883855
Following gene: 218883851
Centisome position: 37.34
GC content: 44.33
Gene sequence:
>609_bases ATGAGCTGTATCGAGACAATAGTCATAGATGTAGATGGAACACTGATACCAAGCCTAGTAGACTTCGATAAACTCAGGAG GAGAATAAGGGAAGAACTAGGTGTGAGCCATGAATTGAAGCCGCTCGGACTATCGCTTTCCAGGCTAGATATACCCGTGG AGAAGAAGAAGCGGGCATGGGAAATGATTGAGGAGGAGGAGTTAAACTCCATAAGGCTCCTTGATCCCGGCTCACTGAGC ACCAATATCAGTGAAGTAATAAAAATGGTGGAGAACGGATTCAAAGTAGTGATAGCCACCCATAGAAGTAAGAGGACTCT TGAACCGCTGCTGGAGAAGCTGTGCCTAACAAACTATATTAGTGAGTACGTGACACGCGACTACTCTATTGACAGGATTG AGCAGTTGAATTATTTAAAGGCCAAGTACAACGAGATAGTTTTTATTGGGGACACCATATATGACGAAGAAGCCTCGATC AAGGCTGATATAAGGTTCTATAGGGTTAAATCATACACGGAACTAGCCAGCATATTGGAGTACTTGAGGCTGGAGTGCTC TAGGAGCCGGAAGCATTACAACACTGGGTTTGGCTCTTCTGTTAAATAG
Upstream 100 bases:
>100_bases ATGCGTACAATACTGATGGCATGCTAATAGGGTACATGAGGGATGATGGGGAAATATATGTTGCATCACAGCATCCAGTT AAGGTAAAGGTAGTTTAGGG
Downstream 100 bases:
>100_bases TCTTCGCCCCCAGCTAGAACCCTCTGTATCGCTGCGTAAAGAGAATCAAATCCCTCTCCCGCGATGTTGGAGACCGGTAC TATATCGAATACCAATAGTT
Product: Heavy metal translocating P-type ATPase
Products: NA
Alternate protein names: HAD Family Hydrolase; Heavy Metal Translocating P-Type ATPase
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MSCIETIVIDVDGTLIPSLVDFDKLRRRIREELGVSHELKPLGLSLSRLDIPVEKKKRAWEMIEEEELNSIRLLDPGSLS TNISEVIKMVENGFKVVIATHRSKRTLEPLLEKLCLTNYISEYVTRDYSIDRIEQLNYLKAKYNEIVFIGDTIYDEEASI KADIRFYRVKSYTELASILEYLRLECSRSRKHYNTGFGSSVK
Sequences:
>Translated_202_residues MSCIETIVIDVDGTLIPSLVDFDKLRRRIREELGVSHELKPLGLSLSRLDIPVEKKKRAWEMIEEEELNSIRLLDPGSLS TNISEVIKMVENGFKVVIATHRSKRTLEPLLEKLCLTNYISEYVTRDYSIDRIEQLNYLKAKYNEIVFIGDTIYDEEASI KADIRFYRVKSYTELASILEYLRLECSRSRKHYNTGFGSSVK >Mature_201_residues SCIETIVIDVDGTLIPSLVDFDKLRRRIREELGVSHELKPLGLSLSRLDIPVEKKKRAWEMIEEEELNSIRLLDPGSLST NISEVIKMVENGFKVVIATHRSKRTLEPLLEKLCLTNYISEYVTRDYSIDRIEQLNYLKAKYNEIVFIGDTIYDEEASIK ADIRFYRVKSYTELASILEYLRLECSRSRKHYNTGFGSSVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23443; Mature: 23312
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCIETIVIDVDGTLIPSLVDFDKLRRRIREELGVSHELKPLGLSLSRLDIPVEKKKRAW CCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHH EMIEEEELNSIRLLDPGSLSTNISEVIKMVENGFKVVIATHRSKRTLEPLLEKLCLTNYI HHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH SEYVTRDYSIDRIEQLNYLKAKYNEIVFIGDTIYDEEASIKADIRFYRVKSYTELASILE HHHHHCCCCHHHHHHHHHHHHCCCCEEEECCEEECCCCCHHHHEEEEEHHHHHHHHHHHH YLRLECSRSRKHYNTGFGSSVK HHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SCIETIVIDVDGTLIPSLVDFDKLRRRIREELGVSHELKPLGLSLSRLDIPVEKKKRAW CCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHHHH EMIEEEELNSIRLLDPGSLSTNISEVIKMVENGFKVVIATHRSKRTLEPLLEKLCLTNYI HHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHH SEYVTRDYSIDRIEQLNYLKAKYNEIVFIGDTIYDEEASIKADIRFYRVKSYTELASILE HHHHHCCCCHHHHHHHHHHHHCCCCEEEECCEEECCCCCHHHHEEEEEHHHHHHHHHHHH YLRLECSRSRKHYNTGFGSSVK HHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA