| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883815
Identifier: 218883815
GI number: 218883815
Start: 474971
End: 475192
Strand: Reverse
Name: 218883815
Synonym: DKAM_0504
Alternate gene names: NA
Gene position: 475192-474971 (Counterclockwise)
Preceding gene: 218883817
Following gene: 218883814
Centisome position: 34.81
GC content: 47.75
Gene sequence:
>222_bases GTGGAGTTATTCGACTGGGTTAAACCACGGAGTGCCCAGCTCCACAGGGTGCTAGCTAATAGATGGATTGCCTCGCTTAT ACCGATACTATTAGGCTTCGCCCTAGCGTACCCTCAAATACCGGATCCGTTGAACCCAGGTAAATATATTTATGCATGCC AGATAGTATGGCCTGTGTTCTCCGGTACAATACTCTTCATCAAGGGACTGCGTGGAAAATAG
Upstream 100 bases:
>100_bases CGTCTAGGCTTCAACTCAGCGTCCTTGAGCAGTATATCCAGCCTATCAATTTTACCTGTAAGGAACCTGTCAATTAGGTA GGCTTGCTAGATTCGTGTGG
Downstream 100 bases:
>100_bases TTTCGAACTCTGAGCCCCTGTATTTTTGAGAAGGTAAGGGAAGGGAGCCGAGATATAAGGGACCCAGTGCTCGATAAACT CGTTGAACTCAGGGATACTT
Product: carbon starvation protein
Products: NA
Alternate protein names: Carbon Starvation Protein CstA
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MELFDWVKPRSAQLHRVLANRWIASLIPILLGFALAYPQIPDPLNPGKYIYACQIVWPVFSGTILFIKGLRGK
Sequences:
>Translated_73_residues MELFDWVKPRSAQLHRVLANRWIASLIPILLGFALAYPQIPDPLNPGKYIYACQIVWPVFSGTILFIKGLRGK >Mature_73_residues MELFDWVKPRSAQLHRVLANRWIASLIPILLGFALAYPQIPDPLNPGKYIYACQIVWPVFSGTILFIKGLRGK
Specific function: Unknown
COG id: COG1966
COG function: function code T; Carbon starvation protein, predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8323; Mature: 8323
Theoretical pI: Translated: 10.36; Mature: 10.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFDWVKPRSAQLHRVLANRWIASLIPILLGFALAYPQIPDPLNPGKYIYACQIVWPVF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHEEHHHHH SGTILFIKGLRGK CCCEEEEECCCCC >Mature Secondary Structure MELFDWVKPRSAQLHRVLANRWIASLIPILLGFALAYPQIPDPLNPGKYIYACQIVWPVF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHEEHHHHH SGTILFIKGLRGK CCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA