Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is yqjI [C]

Identifier: 218883807

GI number: 218883807

Start: 465687

End: 466142

Strand: Direct

Name: yqjI [C]

Synonym: DKAM_0496

Alternate gene names: 218883807

Gene position: 465687-466142 (Clockwise)

Preceding gene: 218883803

Following gene: 218883808

Centisome position: 34.11

GC content: 44.08

Gene sequence:

>456_bases
ATGAATAGAATAAGGCATAGAGGGAAATACGTTGAGCTATTAATACTGGATATGTCGCGTGGAGGCCGTATCCACGGGTA
TTACCTATTGAAGAAGATAAGGGAGGAGACAGGGCTACCAGTGAATCCAGGCCTAATATATCCATTACTAAAGGGCATGG
TTGAAAAGGGCCTGATCAAGGCGGAAGAGAGTTTCGAGAAAGGGAGACGTAAGATAGTGTTCAGGATCACTGAGAAAGGT
GAAAAATACCTAGAGGAAAACAAGCAGGAGCTCGAAATAGCTAGGAAATACTTTGAGAAGCTGAAACTAGCCAAGGAGGT
AGGGCTCACTAAACTGGTGGCCAGGCTAATAAGGATCTTCGAGAAAATAGATCAGCTAACCCCTGAGCAATTAGAGGTTG
TCAGAGGCATCACAAGGGAGCTGGAGGCTAAATTAATAGATATTGCAGGTGAGTAA

Upstream 100 bases:

>100_bases
TACCTCGCTCATAGGGCACACCTTTATCCATAAATATTTCCGTCATGAAGTAATATTTATAAATATATATTAATTTAAAT
ATTTTCTGAGGTAGCTGTAA

Downstream 100 bases:

>100_bases
GTGATGCAGGATATAGTTATCGTTGAAAACCTTGTTAAGAGGTTCAGGGATGTCATAGCAGTGAACAATATATCATTTAA
AATAGAGAAAGGTGAAATAT

Product: PadR-like family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator PadR Family; PadR-Like Family Transcriptional Regulator

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNRIRHRGKYVELLILDMSRGGRIHGYYLLKKIREETGLPVNPGLIYPLLKGMVEKGLIKAEESFEKGRRKIVFRITEKG
EKYLEENKQELEIARKYFEKLKLAKEVGLTKLVARLIRIFEKIDQLTPEQLEVVRGITRELEAKLIDIAGE

Sequences:

>Translated_151_residues
MNRIRHRGKYVELLILDMSRGGRIHGYYLLKKIREETGLPVNPGLIYPLLKGMVEKGLIKAEESFEKGRRKIVFRITEKG
EKYLEENKQELEIARKYFEKLKLAKEVGLTKLVARLIRIFEKIDQLTPEQLEVVRGITRELEAKLIDIAGE
>Mature_151_residues
MNRIRHRGKYVELLILDMSRGGRIHGYYLLKKIREETGLPVNPGLIYPLLKGMVEKGLIKAEESFEKGRRKIVFRITEKG
EKYLEENKQELEIARKYFEKLKLAKEVGLTKLVARLIRIFEKIDQLTPEQLEVVRGITRELEAKLIDIAGE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17634; Mature: 17634

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIRHRGKYVELLILDMSRGGRIHGYYLLKKIREETGLPVNPGLIYPLLKGMVEKGLIK
CCCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
AEESFEKGRRKIVFRITEKGEKYLEENKQELEIARKYFEKLKLAKEVGLTKLVARLIRIF
HHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
EKIDQLTPEQLEVVRGITRELEAKLIDIAGE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRIRHRGKYVELLILDMSRGGRIHGYYLLKKIREETGLPVNPGLIYPLLKGMVEKGLIK
CCCCHHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
AEESFEKGRRKIVFRITEKGEKYLEENKQELEIARKYFEKLKLAKEVGLTKLVARLIRIF
HHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
EKIDQLTPEQLEVVRGITRELEAKLIDIAGE
HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA