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The map label for this gene is ydaO [C]

Identifier: 218883803

GI number: 218883803

Start: 458761

End: 459780

Strand: Direct

Name: ydaO [C]

Synonym: DKAM_0492

Alternate gene names: 218883803

Gene position: 458761-459780 (Clockwise)

Preceding gene: 218883799

Following gene: 218883807

Centisome position: 33.6

GC content: 45.29

Gene sequence:

>1020_bases
ATGGCTAACTGCAGTATATGTGGGCGTCCAGCAATATATGTGAACCCCGTTAACAATAAGGCTTACTGCAGAAACCACTT
CATCGAGTACTTTGAGAAGAAGGTTAAGAAGACCATTAGGAAATACCGTATGCTGGGTAAAAACGAGCATATAATAGTGG
CTGTGAGCGGTGGGAAAGACTCAATAGCCCTCCTACACGTACTCCACAAGTTATCGAGGAAGATGCCCGGCTGGCGTGTC
ACAGCTGTACTTGTAGATGAGGGTATAAAGGGGTATAGGGAGAAGACTGTGGAGAACCTTGTTGCATATGCCGCGAAGAA
CAAGGTTGACTACCATATAGTATCCTTTAAGGAGTATATTGGTGCATCACTTGATGAAATAGTTGAGAAAGGGAGAGCAA
GAGGTCTCCCATACCTCCCCTGTAGCTACTGCGGGGTTTTCCGCAGATACGTCCTCAATAAGGCTGCTAGAAGACTAGGT
GGGACGGTTATAGCTACAGCCCACAACCTCGACGATGTTATTCAAACATTCTTAATGAATATTATCTCGAACAGTGTTGA
TAAAATATATAAGCTAACACCGGTTATAAGCGATGAAGAAGGGGGCTTCATTAAGAGGATAAAGCCGTTCTACACTGTCC
TTGAGAAGGAGTCAGCCCTCTACGCATTGCTGAATGGATTAATAGAGCCTGAGTATGTTCAGTGCCCTTATGCGGAGTAT
AATATCAGGTTCACTATCAGGAAGTTAATAAACGAGCTCGAGGATAAGCATCCAGGCGTAAAGTACGGGCTACTCAACAG
CCTCATATCCCTCACGCAGGAAAAGCAAACCAGGGACACCGTGAACAAGAAGCAAGTATGCAAGATATGCGGAGAACCCT
CCTCACATCCAGTATGTAGAGCCTGCCTCTACAGGTACGAGCTCGGCTTAACGACTAGTGAGGAAGCAGACAGGATAACC
GAGTTAATCAGGGAAAACCCGGTGTTGAAGAAGTACGTATATCTAAAACAGTCTTCCTAA

Upstream 100 bases:

>100_bases
AGTGCTAGGATGCTCAGCATGATACTTCACCATGGGTGCTGAATAAATATAATCAAGCCAGGGATTAATCAATATGGACT
ATGGTTAGGGGAGTTGAGAC

Downstream 100 bases:

>100_bases
CCGGTCAACTCAGATCCACCATATTCAGCTATCCAGGCATTCCTGTAGACCGGGTCTATGAACATGTATTCCCTGCCATC
TATGAGGATGTATGGGTATC

Product: putative ATPase of the PP-loop superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MANCSICGRPAIYVNPVNNKAYCRNHFIEYFEKKVKKTIRKYRMLGKNEHIIVAVSGGKDSIALLHVLHKLSRKMPGWRV
TAVLVDEGIKGYREKTVENLVAYAAKNKVDYHIVSFKEYIGASLDEIVEKGRARGLPYLPCSYCGVFRRYVLNKAARRLG
GTVIATAHNLDDVIQTFLMNIISNSVDKIYKLTPVISDEEGGFIKRIKPFYTVLEKESALYALLNGLIEPEYVQCPYAEY
NIRFTIRKLINELEDKHPGVKYGLLNSLISLTQEKQTRDTVNKKQVCKICGEPSSHPVCRACLYRYELGLTTSEEADRIT
ELIRENPVLKKYVYLKQSS

Sequences:

>Translated_339_residues
MANCSICGRPAIYVNPVNNKAYCRNHFIEYFEKKVKKTIRKYRMLGKNEHIIVAVSGGKDSIALLHVLHKLSRKMPGWRV
TAVLVDEGIKGYREKTVENLVAYAAKNKVDYHIVSFKEYIGASLDEIVEKGRARGLPYLPCSYCGVFRRYVLNKAARRLG
GTVIATAHNLDDVIQTFLMNIISNSVDKIYKLTPVISDEEGGFIKRIKPFYTVLEKESALYALLNGLIEPEYVQCPYAEY
NIRFTIRKLINELEDKHPGVKYGLLNSLISLTQEKQTRDTVNKKQVCKICGEPSSHPVCRACLYRYELGLTTSEEADRIT
ELIRENPVLKKYVYLKQSS
>Mature_338_residues
ANCSICGRPAIYVNPVNNKAYCRNHFIEYFEKKVKKTIRKYRMLGKNEHIIVAVSGGKDSIALLHVLHKLSRKMPGWRVT
AVLVDEGIKGYREKTVENLVAYAAKNKVDYHIVSFKEYIGASLDEIVEKGRARGLPYLPCSYCGVFRRYVLNKAARRLGG
TVIATAHNLDDVIQTFLMNIISNSVDKIYKLTPVISDEEGGFIKRIKPFYTVLEKESALYALLNGLIEPEYVQCPYAEYN
IRFTIRKLINELEDKHPGVKYGLLNSLISLTQEKQTRDTVNKKQVCKICGEPSSHPVCRACLYRYELGLTTSEEADRITE
LIRENPVLKKYVYLKQSS

Specific function: Unknown

COG id: COG0037

COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TtcA family [H]

Homologues:

Organism=Homo sapiens, GI222537719, Length=291, Percent_Identity=31.9587628865979, Blast_Score=142, Evalue=6e-34,
Organism=Escherichia coli, GI1787606, Length=204, Percent_Identity=28.921568627451, Blast_Score=83, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17540090, Length=305, Percent_Identity=32.1311475409836, Blast_Score=155, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI193211090, Length=264, Percent_Identity=26.5151515151515, Blast_Score=72, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6321227, Length=166, Percent_Identity=31.3253012048193, Blast_Score=87, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24651972, Length=307, Percent_Identity=33.2247557003257, Blast_Score=156, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012089
- InterPro:   IPR014729
- InterPro:   IPR011063
- InterPro:   IPR000541
- InterPro:   IPR020554 [H]

Pfam domain/function: PF01171 ATP_bind_3 [H]

EC number: NA

Molecular weight: Translated: 38685; Mature: 38553

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANCSICGRPAIYVNPVNNKAYCRNHFIEYFEKKVKKTIRKYRMLGKNEHIIVAVSGGKD
CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
SIALLHVLHKLSRKMPGWRVTAVLVDEGIKGYREKTVENLVAYAAKNKVDYHIVSFKEYI
HHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH
GASLDEIVEKGRARGLPYLPCSYCGVFRRYVLNKAARRLGGTVIATAHNLDDVIQTFLMN
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHH
IISNSVDKIYKLTPVISDEEGGFIKRIKPFYTVLEKESALYALLNGLIEPEYVQCPYAEY
HHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC
NIRFTIRKLINELEDKHPGVKYGLLNSLISLTQEKQTRDTVNKKQVCKICGEPSSHPVCR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ACLYRYELGLTTSEEADRITELIRENPVLKKYVYLKQSS
HHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHEEEECCC
>Mature Secondary Structure 
ANCSICGRPAIYVNPVNNKAYCRNHFIEYFEKKVKKTIRKYRMLGKNEHIIVAVSGGKD
CCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCC
SIALLHVLHKLSRKMPGWRVTAVLVDEGIKGYREKTVENLVAYAAKNKVDYHIVSFKEYI
HHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHH
GASLDEIVEKGRARGLPYLPCSYCGVFRRYVLNKAARRLGGTVIATAHNLDDVIQTFLMN
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHH
IISNSVDKIYKLTPVISDEEGGFIKRIKPFYTVLEKESALYALLNGLIEPEYVQCPYAEY
HHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCC
NIRFTIRKLINELEDKHPGVKYGLLNSLISLTQEKQTRDTVNKKQVCKICGEPSSHPVCR
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ACLYRYELGLTTSEEADRITELIRENPVLKKYVYLKQSS
HHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]