Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883782
Identifier: 218883782
GI number: 218883782
Start: 440582
End: 441259
Strand: Direct
Name: 218883782
Synonym: DKAM_0471
Alternate gene names: NA
Gene position: 440582-441259 (Clockwise)
Preceding gene: 218883776
Following gene: 218883783
Centisome position: 32.27
GC content: 44.54
Gene sequence:
>678_bases GTGGGTTCACCCCTAGAGAAGGAGATATTATTAAGGATACTTAAATCAAGGAGAATACTGGTTGACGAGGTTCAGGCAGC CTATGGTGTGGTCGATGACGTGCTTGACAAGCTCCTAGGGGACAACAGGGACTTTATCACGGTTAACGGTAGAATGATAA TAGTTGATAAGCCACTTGAACTTGCCTTGAAACTCCTAGATCAAGGAGTAAGCGTGAAAAGGGTAAGCGAGGCACTGGAG TGGAGGGACTTCGAGAAACTGGCATCCACTATAATGAGTGGGCACGGGTACATTGTTGAGACAAACGTATTCCTCTCAAG CCCTGTGAGATTCGAAATAGATGTAGTAGGAGTGGATCCGGTGAGCAGGCTCGGGATACTCGTAGATTGCAAGCAATGGT CCCATAATACTAGGCGGAGGTTGATCGAGGCAGGAACCAGGCAGATTGAACGCCTAGGAAAGCTTATCTCACACTACGAA CATGTTAGAAGCAGGTACAGGGTATTCGATTACATGAGAGAAGCCATACCATTAATTCTAACACTACAGACACCTGTTGT AAGGATATATGAGAACGTGTTATATGTAAGTATAAGGGAGTTCAACGACTTCCTGAATAATATCAGGTACGTGATTGAGT CATTCAATATAAAGCCTTCCCCAACTCCACTTAAATGA
Upstream 100 bases:
>100_bases GATCCACCATTGTCTGCCACCCACTCAATAATTTTAGCCAGGTATATTATAGTTTCATTATAGAGTCCAAGCAATCATAG AGTGAATGGTGGCATAGGTA
Downstream 100 bases:
>100_bases TGGGCCTCCAGTTATAAGCTGTCTCTCTCCTGCATCAGTTTCACCGGGGTTTAGTAAAACAATGGTTCGCAACTTTTTTA AATAATTTTAAAACCATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MGSPLEKEILLRILKSRRILVDEVQAAYGVVDDVLDKLLGDNRDFITVNGRMIIVDKPLELALKLLDQGVSVKRVSEALE WRDFEKLASTIMSGHGYIVETNVFLSSPVRFEIDVVGVDPVSRLGILVDCKQWSHNTRRRLIEAGTRQIERLGKLISHYE HVRSRYRVFDYMREAIPLILTLQTPVVRIYENVLYVSIREFNDFLNNIRYVIESFNIKPSPTPLK
Sequences:
>Translated_225_residues MGSPLEKEILLRILKSRRILVDEVQAAYGVVDDVLDKLLGDNRDFITVNGRMIIVDKPLELALKLLDQGVSVKRVSEALE WRDFEKLASTIMSGHGYIVETNVFLSSPVRFEIDVVGVDPVSRLGILVDCKQWSHNTRRRLIEAGTRQIERLGKLISHYE HVRSRYRVFDYMREAIPLILTLQTPVVRIYENVLYVSIREFNDFLNNIRYVIESFNIKPSPTPLK >Mature_224_residues GSPLEKEILLRILKSRRILVDEVQAAYGVVDDVLDKLLGDNRDFITVNGRMIIVDKPLELALKLLDQGVSVKRVSEALEW RDFEKLASTIMSGHGYIVETNVFLSSPVRFEIDVVGVDPVSRLGILVDCKQWSHNTRRRLIEAGTRQIERLGKLISHYEH VRSRYRVFDYMREAIPLILTLQTPVVRIYENVLYVSIREFNDFLNNIRYVIESFNIKPSPTPLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25996; Mature: 25864
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSPLEKEILLRILKSRRILVDEVQAAYGVVDDVLDKLLGDNRDFITVNGRMIIVDKPLE CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCHH LALKLLDQGVSVKRVSEALEWRDFEKLASTIMSGHGYIVETNVFLSSPVRFEIDVVGVDP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECEEECCCCEEEEEEEECCC VSRLGILVDCKQWSHNTRRRLIEAGTRQIERLGKLISHYEHVRSRYRVFDYMREAIPLIL HHHCCEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE TLQTPVVRIYENVLYVSIREFNDFLNNIRYVIESFNIKPSPTPLK ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure GSPLEKEILLRILKSRRILVDEVQAAYGVVDDVLDKLLGDNRDFITVNGRMIIVDKPLE CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCEEEEEECCHH LALKLLDQGVSVKRVSEALEWRDFEKLASTIMSGHGYIVETNVFLSSPVRFEIDVVGVDP HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECEEECCCCEEEEEEEECCC VSRLGILVDCKQWSHNTRRRLIEAGTRQIERLGKLISHYEHVRSRYRVFDYMREAIPLIL HHHCCEEEECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEE TLQTPVVRIYENVLYVSIREFNDFLNNIRYVIESFNIKPSPTPLK ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA