| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883747
Identifier: 218883747
GI number: 218883747
Start: 405189
End: 405980
Strand: Direct
Name: 218883747
Synonym: DKAM_0436
Alternate gene names: NA
Gene position: 405189-405980 (Clockwise)
Preceding gene: 218883744
Following gene: 218883748
Centisome position: 29.68
GC content: 43.56
Gene sequence:
>792_bases GTGATGGTTTTAGTTAACCCGAAACTCATCGAATCCATGTTATCTGGAAATCCCTTCCTTAAACAGGCATATACACTATT AGTAAATGATCCAGAGGTTCAGGCATTATGGAGCATGGCTAATGTCATGGCTGTAAACCGCTTGAAATATAATGACCATG GATCGGTGCATGCACATATAGCCGCTGGTGCATCACTCTACATATACCAGTTACTTCTCTCCAAAGGAGTTCAGCCTTCC CTATTAAAGGATGGAGTCGTGGATAATATTGAATACACGTGGCTTATACCATTAATCGGATCGTTGCTTCATGATATAGG TAATAGCATCCACAGGGACATGCATGAAAGGATTGGGGCCCTACTGGCTATACCAATCATCGAGAGGGTTCTTGAGAAGT TGATCACGGATCAACTAACCAGGACTAAGTTAAGGCAGGAGATAGCGCATGCAATATATTGTACAAGCTATGACGTAGAA TGCCTCACCTATGAGGCTGGATGCGTTAAAGTAGGTGATGGCGTTGATATGGCTGAGGGAAGGGCGAGGGTACCCTATAG GCTCGGAGGTATCTCCATACATAGTGTTTCAGCGCTTAGCATAAAATCCGTTGAAATACTTCCCTCAGAGAGATTCTCTG TAAGAATAAACGTGAATATGACGGAGCGAGCTGGGATATTCCAGGTGGATGAAATACTTATACCAAAGATATCGTCAACA CCCTTGAAGAACCATGTGGAGGTCTACACTTTAATGGGGGGATCCGTGGTTAAATCATATACACCCTCTTGA
Upstream 100 bases:
>100_bases ACACAGGGTACACCTTTAGAAGCATATCATGTAAATATCTATGTAAGTAATTTATTAAGGGTTTATTTACTATTTACATG GAAACACGGTAAAGGGATAA
Downstream 100 bases:
>100_bases TCAATAATGATATATATATGTCTTAGTCTGACCCCCGCCCTGAAGGACGAGAGTTGCCTCTTGGACAGTTCATTGGTTCC CACATCTATTCGGGTTTATA
Product: Metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MMVLVNPKLIESMLSGNPFLKQAYTLLVNDPEVQALWSMANVMAVNRLKYNDHGSVHAHIAAGASLYIYQLLLSKGVQPS LLKDGVVDNIEYTWLIPLIGSLLHDIGNSIHRDMHERIGALLAIPIIERVLEKLITDQLTRTKLRQEIAHAIYCTSYDVE CLTYEAGCVKVGDGVDMAEGRARVPYRLGGISIHSVSALSIKSVEILPSERFSVRINVNMTERAGIFQVDEILIPKISST PLKNHVEVYTLMGGSVVKSYTPS
Sequences:
>Translated_263_residues MMVLVNPKLIESMLSGNPFLKQAYTLLVNDPEVQALWSMANVMAVNRLKYNDHGSVHAHIAAGASLYIYQLLLSKGVQPS LLKDGVVDNIEYTWLIPLIGSLLHDIGNSIHRDMHERIGALLAIPIIERVLEKLITDQLTRTKLRQEIAHAIYCTSYDVE CLTYEAGCVKVGDGVDMAEGRARVPYRLGGISIHSVSALSIKSVEILPSERFSVRINVNMTERAGIFQVDEILIPKISST PLKNHVEVYTLMGGSVVKSYTPS >Mature_263_residues MMVLVNPKLIESMLSGNPFLKQAYTLLVNDPEVQALWSMANVMAVNRLKYNDHGSVHAHIAAGASLYIYQLLLSKGVQPS LLKDGVVDNIEYTWLIPLIGSLLHDIGNSIHRDMHERIGALLAIPIIERVLEKLITDQLTRTKLRQEIAHAIYCTSYDVE CLTYEAGCVKVGDGVDMAEGRARVPYRLGGISIHSVSALSIKSVEILPSERFSVRINVNMTERAGIFQVDEILIPKISST PLKNHVEVYTLMGGSVVKSYTPS
Specific function: Unknown
COG id: COG3294
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29095; Mature: 29095
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMVLVNPKLIESMLSGNPFLKQAYTLLVNDPEVQALWSMANVMAVNRLKYNDHGSVHAHI CEEEECHHHHHHHHCCCHHHHHHEEEEECCCHHHHHHHHHHHHHHHHEEECCCCCEEEEE AAGASLYIYQLLLSKGVQPSLLKDGVVDNIEYTWLIPLIGSLLHDIGNSIHRDMHERIGA ECCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH LLAIPIIERVLEKLITDQLTRTKLRQEIAHAIYCTSYDVECLTYEAGCVKVGDGVDMAEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCEEEECCCCCCCCC RARVPYRLGGISIHSVSALSIKSVEILPSERFSVRINVNMTERAGIFQVDEILIPKISST CCCCCEEECCEEEECEEEEEEEEEEECCCCCEEEEEEEEECCCCCCEEEHHHHCCCCCCC PLKNHVEVYTLMGGSVVKSYTPS CCCCCEEEEEEECCHHHHCCCCC >Mature Secondary Structure MMVLVNPKLIESMLSGNPFLKQAYTLLVNDPEVQALWSMANVMAVNRLKYNDHGSVHAHI CEEEECHHHHHHHHCCCHHHHHHEEEEECCCHHHHHHHHHHHHHHHHEEECCCCCEEEEE AAGASLYIYQLLLSKGVQPSLLKDGVVDNIEYTWLIPLIGSLLHDIGNSIHRDMHERIGA ECCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH LLAIPIIERVLEKLITDQLTRTKLRQEIAHAIYCTSYDVECLTYEAGCVKVGDGVDMAEG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEEECCEEEECCCCCCCCC RARVPYRLGGISIHSVSALSIKSVEILPSERFSVRINVNMTERAGIFQVDEILIPKISST CCCCCEEECCEEEECEEEEEEEEEEECCCCCEEEEEEEEECCCCCCEEEHHHHCCCCCCC PLKNHVEVYTLMGGSVVKSYTPS CCCCCEEEEEEECCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]