Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883724

Identifier: 218883724

GI number: 218883724

Start: 387900

End: 388163

Strand: Reverse

Name: 218883724

Synonym: DKAM_0413

Alternate gene names: NA

Gene position: 388163-387900 (Counterclockwise)

Preceding gene: 218883725

Following gene: 218883723

Centisome position: 28.43

GC content: 42.8

Gene sequence:

>264_bases
ATGATAAGCGCGGAACTAGCCGTATACTTATTAATGACTATATCTAGTGTGGCATCGACTATAGCCGTGTATTTTGCAAT
CATGGAGAAGGATCTCGTGAAAGCAGTGATCTATAGCGCTATCCAGAGTACTTTCTACGCTATTCTCTTTTACCTGTTAA
TGGCTCCTGACATAGTCTTGGTATACCTACCTGTCTCGGTTGGATTGATCCCTGGTGTACTCCTCATATTGATTGGTAAA
ACCGAGAGGGGTGAGAAAGAGTGA

Upstream 100 bases:

>100_bases
TGGCACGTGCCGTGCATAGATCTAGGACTGCACTGGTTGAGCCCTGTATTTATGATGCAATAGATAGTGGGATGTGTGTG
AAAAAGGAGGTGTCTACGCA

Downstream 100 bases:

>100_bases
GAAGGAGTATTCTGCACCTAACCATAATTCTAACACTGCTTCTAGGGTTAAGCCTCTTAGCCAGCATATCATGGCAGTGG
TTTGTCCCTGGTGAATGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MISAELAVYLLMTISSVASTIAVYFAIMEKDLVKAVIYSAIQSTFYAILFYLLMAPDIVLVYLPVSVGLIPGVLLILIGK
TERGEKE

Sequences:

>Translated_87_residues
MISAELAVYLLMTISSVASTIAVYFAIMEKDLVKAVIYSAIQSTFYAILFYLLMAPDIVLVYLPVSVGLIPGVLLILIGK
TERGEKE
>Mature_87_residues
MISAELAVYLLMTISSVASTIAVYFAIMEKDLVKAVIYSAIQSTFYAILFYLLMAPDIVLVYLPVSVGLIPGVLLILIGK
TERGEKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9517; Mature: 9517

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISAELAVYLLMTISSVASTIAVYFAIMEKDLVKAVIYSAIQSTFYAILFYLLMAPDIVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYLPVSVGLIPGVLLILIGKTERGEKE
HHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MISAELAVYLLMTISSVASTIAVYFAIMEKDLVKAVIYSAIQSTFYAILFYLLMAPDIVL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VYLPVSVGLIPGVLLILIGKTERGEKE
HHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA