| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883723
Identifier: 218883723
GI number: 218883723
Start: 387082
End: 387903
Strand: Reverse
Name: 218883723
Synonym: DKAM_0412
Alternate gene names: NA
Gene position: 387903-387082 (Counterclockwise)
Preceding gene: 218883724
Following gene: 218883722
Centisome position: 28.41
GC content: 47.2
Gene sequence:
>822_bases GTGAGAAGGAGTATTCTGCACCTAACCATAATTCTAACACTGCTTCTAGGGTTAAGCCTCTTAGCCAGCATATCATGGCA GTGGTTTGTCCCTGGTGAATGGTTTAAGTGTCCCTTGCAGGGTATCTGGTGTCTTCCAGTATTCTACTTGGCTACAACGT ATAACCCGGAGCTATCCAACTACACTGTGAATTCTCCGGAGGCTGTTACAGCAATAGTGTGGGACTACCGTGGCCTGGAT ACGTTATTTGAGACATCGGTATTCTATCTAGCACTGATAGCGGGAATCGCGTTAGCCAGGGGTGTATCATATAAGTTGCC AACTGGTGGAGAGCTCGGTCTCTCCAAGATAGTTAAAACTGTTTCGAGGCTGACACTCCCGATGATTATAACTGTTGGAG CATCAATCGGGCTACATGGTCATTTAACGCCTGGTGGAGGCTTCCAGGGTGGGGCCACAGCGGCTGTTGCATTCATGGTT GCCATCGTAGTGTTCTCCATAGTGTTCCTAGTGGAGCACGGTGTCAGCAAGGATAGAATGCTTATATTAAGGAGCATCGG TTTAACCGGCATAGGTTTAACAGCTGTAGCGTTATTCTTCGCTGGATTAATTCTCGGTAAGAACGCATATGTATTCCAGA ACATGGCTAAACCATTTGCAGGATTAAGCTTTCCCTGGGAGGTGAATAGCGCATTAATAAGCGGGACGCTATGGTTTTTC AATCTATTCGAGTTCTTAGCTGTGACAGCCGGGTTTACAATAGCATTCATGCTTCTAGCAATGAGTGAGGCGGGGTCTGA GGAGGGGGTTAGGCATGAGTGA
Upstream 100 bases:
>100_bases TGGCTCCTGACATAGTCTTGGTATACCTACCTGTCTCGGTTGGATTGATCCCTGGTGTACTCCTCATATTGATTGGTAAA ACCGAGAGGGGTGAGAAAGA
Downstream 100 bases:
>100_bases GTTTATTGTAAACTACTTGTTCTCACTTACCTTGTTCTCACTAATATTCAACTTTGTATTATCCATATACGGCTTATTCT TTAAGCCCCATTATATTAAG
Product: Na+/H+ antiporter, MnhB subunit
Products: NA
Alternate protein names: Na+/H+ Antiporter MnhB Subunit-Like Protein; Multisubunit Na+/H+ Antiporter MnhB Subunit; Na+/H+ Antiporter Family Domain Protein; Na+/H+ Antiporter MnhB Subunit; Membrane Bound Complex 1 Subunit D
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MRRSILHLTIILTLLLGLSLLASISWQWFVPGEWFKCPLQGIWCLPVFYLATTYNPELSNYTVNSPEAVTAIVWDYRGLD TLFETSVFYLALIAGIALARGVSYKLPTGGELGLSKIVKTVSRLTLPMIITVGASIGLHGHLTPGGGFQGGATAAVAFMV AIVVFSIVFLVEHGVSKDRMLILRSIGLTGIGLTAVALFFAGLILGKNAYVFQNMAKPFAGLSFPWEVNSALISGTLWFF NLFEFLAVTAGFTIAFMLLAMSEAGSEEGVRHE
Sequences:
>Translated_273_residues MRRSILHLTIILTLLLGLSLLASISWQWFVPGEWFKCPLQGIWCLPVFYLATTYNPELSNYTVNSPEAVTAIVWDYRGLD TLFETSVFYLALIAGIALARGVSYKLPTGGELGLSKIVKTVSRLTLPMIITVGASIGLHGHLTPGGGFQGGATAAVAFMV AIVVFSIVFLVEHGVSKDRMLILRSIGLTGIGLTAVALFFAGLILGKNAYVFQNMAKPFAGLSFPWEVNSALISGTLWFF NLFEFLAVTAGFTIAFMLLAMSEAGSEEGVRHE >Mature_273_residues MRRSILHLTIILTLLLGLSLLASISWQWFVPGEWFKCPLQGIWCLPVFYLATTYNPELSNYTVNSPEAVTAIVWDYRGLD TLFETSVFYLALIAGIALARGVSYKLPTGGELGLSKIVKTVSRLTLPMIITVGASIGLHGHLTPGGGFQGGATAAVAFMV AIVVFSIVFLVEHGVSKDRMLILRSIGLTGIGLTAVALFFAGLILGKNAYVFQNMAKPFAGLSFPWEVNSALISGTLWFF NLFEFLAVTAGFTIAFMLLAMSEAGSEEGVRHE
Specific function: Unknown
COG id: COG2111
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhB subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29533; Mature: 29533
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSILHLTIILTLLLGLSLLASISWQWFVPGEWFKCPLQGIWCLPVFYLATTYNPELSN CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCHHHHHHHHHHHCCCCCCCC YTVNSPEAVTAIVWDYRGLDTLFETSVFYLALIAGIALARGVSYKLPTGGELGLSKIVKT EECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHH VSRLTLPMIITVGASIGLHGHLTPGGGFQGGATAAVAFMVAIVVFSIVFLVEHGVSKDRM HHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LILRSIGLTGIGLTAVALFFAGLILGKNAYVFQNMAKPFAGLSFPWEVNSALISGTLWFF HHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH NLFEFLAVTAGFTIAFMLLAMSEAGSEEGVRHE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MRRSILHLTIILTLLLGLSLLASISWQWFVPGEWFKCPLQGIWCLPVFYLATTYNPELSN CCCHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCCCCHHHHHHHHHHHCCCCCCCC YTVNSPEAVTAIVWDYRGLDTLFETSVFYLALIAGIALARGVSYKLPTGGELGLSKIVKT EECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHH VSRLTLPMIITVGASIGLHGHLTPGGGFQGGATAAVAFMVAIVVFSIVFLVEHGVSKDRM HHHHHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LILRSIGLTGIGLTAVALFFAGLILGKNAYVFQNMAKPFAGLSFPWEVNSALISGTLWFF HHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH NLFEFLAVTAGFTIAFMLLAMSEAGSEEGVRHE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA