| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883721
Identifier: 218883721
GI number: 218883721
Start: 386173
End: 386688
Strand: Reverse
Name: 218883721
Synonym: DKAM_0410
Alternate gene names: NA
Gene position: 386688-386173 (Counterclockwise)
Preceding gene: 218883722
Following gene: 218883720
Centisome position: 28.32
GC content: 42.05
Gene sequence:
>516_bases GTGATCATAGTGAAGAAGCTCAGTAAGGCAGTAGTAGTATTCATGCTTTCATTTACCACATATATAGTGTTCTCAGGGAG CATACAGCCATACGATTTAATAACAGGTGCCGTAGTGGCAGGTATTGTAGGGGCATTATTCGCAAATATAACCCTGACTA ATCCTGGTAAAGTAATTAATCCAGTTAGATGGATCTGGTTAATCGTCTACGCGTTAAGATACTTCACTATAGATGAGACA AAGGCTCATCTAGATGTAATAAAGAGGATACTTCATCCAAGAACCCCTGTTAACCCAGCTATAGTCAAGGTTCCATACGA GGTCGACTCAGACTACGCTATAACCGCCATAGCCAACTCGATAACCAATACCCCGGGCACGGTTGTTGTAGAGGTGAGAG AAGATGAGAAAGCATTCTATGTTCACTGGATTGATGCTAAAACCGTGGAACCCAGCGGGGCCAGGAATGAGATATCTTTT GTTTTCGAAAAGTATTCCCGTAAAATATTCGAGTGA
Upstream 100 bases:
>100_bases TGATAGGGCTCGCCGTCACTTTGTTCCTTATATTTCTTGGTTACCAGTTATACAAACACTATCATACTCTCGACATGAGG GAGATAAGGAGGCTCAGAGG
Downstream 100 bases:
>100_bases GAGGTGTAGATCATGCTGGATCAACTAGCATTTAAACTAGCTGGGTTAACAGTCCCATTGCTTGCACTCATAGCGTTCCT CATACCTTTACTCGAGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Cation Antiporter; Membrane Bound Hydrogenase MbhA Subunit; Na(+) H(+) Antiporter Subunit E; Integral Membrane Protein; Membrane Bound Hydrogenase MbhA-Like Subunit; Membrane-Bound Hydrogenase MBH 1 Subunit Mbh1A; Membrane-Bound Hydrogenase MBH 2 Subunit Mbh2A; Membrane Bound Hydrogenase MbxA Subunit; PH Adaptation Potassium Efflux System Protein E; Membrane Bound Protein Complex Subunit MbxA; Membrane Bound Hydrogenase Subunit MbhA; Multisubunit Na+/H+ Antiporter Mnhe Subunit; Membrane Bound Complex 1 Subunit B; Membrane-Bound NADP+-Reducing Complex MBX Subunit MbxA; Multisubunit Na+/H+ Antiporter MnhE Subunit
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MIIVKKLSKAVVVFMLSFTTYIVFSGSIQPYDLITGAVVAGIVGALFANITLTNPGKVINPVRWIWLIVYALRYFTIDET KAHLDVIKRILHPRTPVNPAIVKVPYEVDSDYAITAIANSITNTPGTVVVEVREDEKAFYVHWIDAKTVEPSGARNEISF VFEKYSRKIFE
Sequences:
>Translated_171_residues MIIVKKLSKAVVVFMLSFTTYIVFSGSIQPYDLITGAVVAGIVGALFANITLTNPGKVINPVRWIWLIVYALRYFTIDET KAHLDVIKRILHPRTPVNPAIVKVPYEVDSDYAITAIANSITNTPGTVVVEVREDEKAFYVHWIDAKTVEPSGARNEISF VFEKYSRKIFE >Mature_171_residues MIIVKKLSKAVVVFMLSFTTYIVFSGSIQPYDLITGAVVAGIVGALFANITLTNPGKVINPVRWIWLIVYALRYFTIDET KAHLDVIKRILHPRTPVNPAIVKVPYEVDSDYAITAIANSITNTPGTVVVEVREDEKAFYVHWIDAKTVEPSGARNEISF VFEKYSRKIFE
Specific function: Unknown
COG id: COG1863
COG function: function code P; Multisubunit Na+/H+ antiporter, MnhE subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19207; Mature: 19207
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIVKKLSKAVVVFMLSFTTYIVFSGSIQPYDLITGAVVAGIVGALFANITLTNPGKVIN CEEHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCC PVRWIWLIVYALRYFTIDETKAHLDVIKRILHPRTPVNPAIVKVPYEVDSDYAITAIANS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEEHHH ITNTPGTVVVEVREDEKAFYVHWIDAKTVEPSGARNEISFVFEKYSRKIFE HCCCCCEEEEEEECCCCEEEEEEECCEEECCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MIIVKKLSKAVVVFMLSFTTYIVFSGSIQPYDLITGAVVAGIVGALFANITLTNPGKVIN CEEHHHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHCCEECCCCCCCC PVRWIWLIVYALRYFTIDETKAHLDVIKRILHPRTPVNPAIVKVPYEVDSDYAITAIANS HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCEEEEEEHHH ITNTPGTVVVEVREDEKAFYVHWIDAKTVEPSGARNEISFVFEKYSRKIFE HCCCCCEEEEEEECCCCEEEEEEECCEEECCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA