Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883709

Identifier: 218883709

GI number: 218883709

Start: 371548

End: 372093

Strand: Direct

Name: 218883709

Synonym: DKAM_0398

Alternate gene names: NA

Gene position: 371548-372093 (Clockwise)

Preceding gene: 218883705

Following gene: 218883712

Centisome position: 27.22

GC content: 39.38

Gene sequence:

>546_bases
GTGGGCTTTGAGAGGGGTTTGACCGGGTTGTCCACGAGGTTATTGATGCTGATTGGTTTATCTATGTTGATCGCATCAAT
CTTGCTGTCAATGGCATCAATGCTAACCTATTACAATGTAATCCATTATTCAACAATATATAATTTAACCACCATAGAAA
TACCCCTTACATCAATCCTGGATAACACTGACCCAGGGAACCTGGTAAACATCACCTTAGCGGTTGAGAACATAGATACT
CATATAGCAGAGATAACCATATTCAACAGGTTAATAGAGTATAGTGAATACGTTAAGCCAGGTGAAGTAGCGGTCTTCAC
ACTGGATAATTTATTCTACAATATAATAGCCTCCGAGGATACCCAAGTATCAATCAATATGACATGTATAAGGGAGGAGA
AACCATTTCTATTACTCTCACTGCTCTCTCTAGTCACGTTCACCATAGGCACTGTTGTCTCAGTGTTCTATGTGTACTTG
AAGACACTTGAGAAAATGAGGCCTCAACAAGAACCATTCATGCATCCATGGAGAGATATAAATTGA

Upstream 100 bases:

>100_bases
TTAATAATAGTAATGGAATATATTTACTCAATACTTCTCACCCATACAATTATTAAGGATTACATGAGTAGGTATATAAA
TCTTAGCCCGCTATAAACAA

Downstream 100 bases:

>100_bases
TCACCCGTATCCAGGTAAAAATAATCTGGTAGTCGACGATATCGATTTAAAAACAATTATTTTATAAACCCTTTTTACCG
TTCTCAGACTTCAGGTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MGFERGLTGLSTRLLMLIGLSMLIASILLSMASMLTYYNVIHYSTIYNLTTIEIPLTSILDNTDPGNLVNITLAVENIDT
HIAEITIFNRLIEYSEYVKPGEVAVFTLDNLFYNIIASEDTQVSINMTCIREEKPFLLLSLLSLVTFTIGTVVSVFYVYL
KTLEKMRPQQEPFMHPWRDIN

Sequences:

>Translated_181_residues
MGFERGLTGLSTRLLMLIGLSMLIASILLSMASMLTYYNVIHYSTIYNLTTIEIPLTSILDNTDPGNLVNITLAVENIDT
HIAEITIFNRLIEYSEYVKPGEVAVFTLDNLFYNIIASEDTQVSINMTCIREEKPFLLLSLLSLVTFTIGTVVSVFYVYL
KTLEKMRPQQEPFMHPWRDIN
>Mature_180_residues
GFERGLTGLSTRLLMLIGLSMLIASILLSMASMLTYYNVIHYSTIYNLTTIEIPLTSILDNTDPGNLVNITLAVENIDTH
IAEITIFNRLIEYSEYVKPGEVAVFTLDNLFYNIIASEDTQVSINMTCIREEKPFLLLSLLSLVTFTIGTVVSVFYVYLK
TLEKMRPQQEPFMHPWRDIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20596; Mature: 20465

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGFERGLTGLSTRLLMLIGLSMLIASILLSMASMLTYYNVIHYSTIYNLTTIEIPLTSIL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHH
DNTDPGNLVNITLAVENIDTHIAEITIFNRLIEYSEYVKPGEVAVFTLDNLFYNIIASED
CCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCC
TQVSINMTCIREEKPFLLLSLLSLVTFTIGTVVSVFYVYLKTLEKMRPQQEPFMHPWRDI
CEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
N
C
>Mature Secondary Structure 
GFERGLTGLSTRLLMLIGLSMLIASILLSMASMLTYYNVIHYSTIYNLTTIEIPLTSIL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEHHHHH
DNTDPGNLVNITLAVENIDTHIAEITIFNRLIEYSEYVKPGEVAVFTLDNLFYNIIASED
CCCCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCC
TQVSINMTCIREEKPFLLLSLLSLVTFTIGTVVSVFYVYLKTLEKMRPQQEPFMHPWRDI
CEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA