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The map label for this gene is 218883691

Identifier: 218883691

GI number: 218883691

Start: 353232

End: 354029

Strand: Direct

Name: 218883691

Synonym: DKAM_0380

Alternate gene names: NA

Gene position: 353232-354029 (Clockwise)

Preceding gene: 218883690

Following gene: 218883696

Centisome position: 25.87

GC content: 44.74

Gene sequence:

>798_bases
TTGTTCCAGGAGTTTAAAGTAATAAAGACAAGGTGTGAGACAGCCCTATCGAGGAGCGGGTTGCCGGGACTAAACTATGC
TTTAAACCCCTATGTCGGTTGTTCACATGCCTGTATCTACTGCTATGCTAGGTTATACACGAGGAATAGAGATGTAGGCG
GTAACTGGGGAAGGATAATCCTAGTGAAAGAGAATATAGTTGACGTATTAAGAAGGGAGGTAGTCAAGTACCAAAGGGGC
GTTGTCGGCATTGGCACGGTAACAGATGCATATCAACCCGTTGAAGCCGTGTATAAGCTAACGCGGCGTTCACTAGAAGT
ATTATTAAGACATGGTTTCCATGCAAGTATTCAGACAAAGAATCCCCTGGTTTTAAGAGACATGGATCTCCTGGTAACAC
ATAGGGATCTAGTTGATGTGGGATTCACGATAACCACCCTTGATTACAGGGCCTCCATACAGATAGAGCCACATGCACCG
CCCCCAAATGCCCGTTTAAAAGCACTCGAAAAACTAGTCGAGGAAAAAATTGCCTCATGGATTTTCTACGGGCCAATTAT
ACCAGGCATCAATAGTGACCCCGATACTGTGAGAAGCATGGTGGAGATAGCTAAGAAACTAAACATAGTACTATATTACG
ACGTACTTCATGTGAAATCATTCATGAATACGCCCACGCACCCATTGTATAATTACATTGAGAGAGCCCGTAGAGAGAGA
AGGCGGATCATGGAACTAATAGAGACCGAGTGCAAGAGGCAGAAGGTGACATGTAGAACCGGTTTCAGTGAGGTGTGA

Upstream 100 bases:

>100_bases
ACCAGGCTCGGGGCTACTAAATGGTACAATTCCTCCAAGCTGCTTCAGAGGATTGTAAAAACGAGGAGTATTAGAGACTT
CTTCTCGAGGGATACCTGAG

Downstream 100 bases:

>100_bases
ATAGTCTACAATACTGGACTGGTTAAAGATCGCGCGTGATTATTTATCTTCTTTCTCCCCCGTACCTCTCTCTTCTTCCT
CAACTCTGAGTACCCTGCCT

Product: DNA repair photolyase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MFQEFKVIKTRCETALSRSGLPGLNYALNPYVGCSHACIYCYARLYTRNRDVGGNWGRIILVKENIVDVLRREVVKYQRG
VVGIGTVTDAYQPVEAVYKLTRRSLEVLLRHGFHASIQTKNPLVLRDMDLLVTHRDLVDVGFTITTLDYRASIQIEPHAP
PPNARLKALEKLVEEKIASWIFYGPIIPGINSDPDTVRSMVEIAKKLNIVLYYDVLHVKSFMNTPTHPLYNYIERARRER
RRIMELIETECKRQKVTCRTGFSEV

Sequences:

>Translated_265_residues
MFQEFKVIKTRCETALSRSGLPGLNYALNPYVGCSHACIYCYARLYTRNRDVGGNWGRIILVKENIVDVLRREVVKYQRG
VVGIGTVTDAYQPVEAVYKLTRRSLEVLLRHGFHASIQTKNPLVLRDMDLLVTHRDLVDVGFTITTLDYRASIQIEPHAP
PPNARLKALEKLVEEKIASWIFYGPIIPGINSDPDTVRSMVEIAKKLNIVLYYDVLHVKSFMNTPTHPLYNYIERARRER
RRIMELIETECKRQKVTCRTGFSEV
>Mature_265_residues
MFQEFKVIKTRCETALSRSGLPGLNYALNPYVGCSHACIYCYARLYTRNRDVGGNWGRIILVKENIVDVLRREVVKYQRG
VVGIGTVTDAYQPVEAVYKLTRRSLEVLLRHGFHASIQTKNPLVLRDMDLLVTHRDLVDVGFTITTLDYRASIQIEPHAP
PPNARLKALEKLVEEKIASWIFYGPIIPGINSDPDTVRSMVEIAKKLNIVLYYDVLHVKSFMNTPTHPLYNYIERARRER
RRIMELIETECKRQKVTCRTGFSEV

Specific function: Unknown

COG id: COG1533

COG function: function code L; DNA repair photolyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 30527; Mature: 30527

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQEFKVIKTRCETALSRSGLPGLNYALNPYVGCSHACIYCYARLYTRNRDVGGNWGRII
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
LVKENIVDVLRREVVKYQRGVVGIGTVTDAYQPVEAVYKLTRRSLEVLLRHGFHASIQTK
EEHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
NPLVLRDMDLLVTHRDLVDVGFTITTLDYRASIQIEPHAPPPNARLKALEKLVEEKIASW
CCEEEECHHHHHHHHHHHHHCEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
IFYGPIIPGINSDPDTVRSMVEIAKKLNIVLYYDVLHVKSFMNTPTHPLYNYIERARRER
HHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RRIMELIETECKRQKVTCRTGFSEV
HHHHHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure
MFQEFKVIKTRCETALSRSGLPGLNYALNPYVGCSHACIYCYARLYTRNRDVGGNWGRII
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEE
LVKENIVDVLRREVVKYQRGVVGIGTVTDAYQPVEAVYKLTRRSLEVLLRHGFHASIQTK
EEHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCC
NPLVLRDMDLLVTHRDLVDVGFTITTLDYRASIQIEPHAPPPNARLKALEKLVEEKIASW
CCEEEECHHHHHHHHHHHHHCEEEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
IFYGPIIPGINSDPDTVRSMVEIAKKLNIVLYYDVLHVKSFMNTPTHPLYNYIERARRER
HHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHH
RRIMELIETECKRQKVTCRTGFSEV
HHHHHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]