| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883690
Identifier: 218883690
GI number: 218883690
Start: 351989
End: 353230
Strand: Direct
Name: 218883690
Synonym: DKAM_0379
Alternate gene names: NA
Gene position: 351989-353230 (Clockwise)
Preceding gene: 218883689
Following gene: 218883691
Centisome position: 25.78
GC content: 47.1
Gene sequence:
>1242_bases ATGATGAGCTTTAATCCCAGGATCTGTTCTACATGCCGGGGCCGGGGCTTCTGCGGGTTATCCTACTGCCCTGTTATAGC TAGGGCTAGAGCATCCATTAAGCTATCGGGGATCACTGGCCAGCGTGTGATAGAGGGTTCCACCCCGCCCTCATTATTTG TTGGGAGATATGGTTATCCATATGTTAGAGCAGGTCCAGGCGCTGCTCCTCCAAACAATGATGTACTAGTGTATGATTAC CCTGAATCATGGCTTGGAAGAAGGATAGAGGACATCCTTGAATATAGATGGAGCCTTGTAACAGGATATACCAGTATAGA TGTGAGAAAGCCGTATGATAGGATAGTTGAAGAGACAAGACTCATGACCCTGAGCAGTAGACCTGTGGATATTAGAGTAG AGTTAGCTAAGCCACCGCGTCCAATATTACATCTCAGCGAAGAGGAACCACCGCAGGGCCCTAGGGCACCAATAGTAAGG CTACAGGTATTAGGCAATCCCTCTGTGCCTAGGCCCGTGGAGAAGGCGTTTAATGATACGGATCTACCAGCCTATGACGC GGTGGTCTACCTCTATAAGTCAAATATACCGGTTTCCCATATACAGAAGATACTCAGTGCCGGAGCACTAGGTGTTAAAA ACCAGAGGAGACTGGTACCTACAAGGTGGAGCATCACCGCTGTTGACAGCATGATATCCAGGGAACTGCTTAGAGAGGTG AAAAAATATGACGTTATCAACGAGATAGAGGTATACATACTTAGGCACTACGATAACTTATTCATAGCAGTACTCTACCC AGCTAAGTGGAGTTATGAATGGATGGAAGCCTGGTGGCCAGGCTCCACATGGAACCCTGGAGCCCTGGACGTGGTTGTTG AGGGAGACTATGAGGACTATCATGGGAGAACAACTTATCCAGGTATTGGTGGATGCTACTATGCAAGCATGCTTGCGACA CTTGAGCATCTTTCAAGGATGAGAAGACAGGCTACAGCGATACTACTTAGGGAGATATATCCAGGTTTCAATCTACCATT GGGTGTCTGGTTTGTCAGGGAGTCGATTAGAGAGATGTACAGGCATGAACCAATCTTAAAGACCAGCAAGTTAAAGGAGG TCTTCGATCTACTGGATAAGGTAACCAGGCTCGGGGCTACTAAATGGTACAATTCCTCCAAGCTGCTTCAGAGGATTGTA AAAACGAGGAGTATTAGAGACTTCTTCTCGAGGGATACCTGA
Upstream 100 bases:
>100_bases GGTCTGGCTAGATAGAGACGACCTCATCTAGATGAATAATTTAAATTAAGGTGTGGTAAGTTTAATTATAGTTAATTGTA TAGGGTGATAGGAGCAAGTT
Downstream 100 bases:
>100_bases GTTGTTCCAGGAGTTTAAAGTAATAAAGACAAGGTGTGAGACAGCCCTATCGAGGAGCGGGTTGCCGGGACTAAACTATG CTTTAAACCCCTATGTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MMSFNPRICSTCRGRGFCGLSYCPVIARARASIKLSGITGQRVIEGSTPPSLFVGRYGYPYVRAGPGAAPPNNDVLVYDY PESWLGRRIEDILEYRWSLVTGYTSIDVRKPYDRIVEETRLMTLSSRPVDIRVELAKPPRPILHLSEEEPPQGPRAPIVR LQVLGNPSVPRPVEKAFNDTDLPAYDAVVYLYKSNIPVSHIQKILSAGALGVKNQRRLVPTRWSITAVDSMISRELLREV KKYDVINEIEVYILRHYDNLFIAVLYPAKWSYEWMEAWWPGSTWNPGALDVVVEGDYEDYHGRTTYPGIGGCYYASMLAT LEHLSRMRRQATAILLREIYPGFNLPLGVWFVRESIREMYRHEPILKTSKLKEVFDLLDKVTRLGATKWYNSSKLLQRIV KTRSIRDFFSRDT
Sequences:
>Translated_413_residues MMSFNPRICSTCRGRGFCGLSYCPVIARARASIKLSGITGQRVIEGSTPPSLFVGRYGYPYVRAGPGAAPPNNDVLVYDY PESWLGRRIEDILEYRWSLVTGYTSIDVRKPYDRIVEETRLMTLSSRPVDIRVELAKPPRPILHLSEEEPPQGPRAPIVR LQVLGNPSVPRPVEKAFNDTDLPAYDAVVYLYKSNIPVSHIQKILSAGALGVKNQRRLVPTRWSITAVDSMISRELLREV KKYDVINEIEVYILRHYDNLFIAVLYPAKWSYEWMEAWWPGSTWNPGALDVVVEGDYEDYHGRTTYPGIGGCYYASMLAT LEHLSRMRRQATAILLREIYPGFNLPLGVWFVRESIREMYRHEPILKTSKLKEVFDLLDKVTRLGATKWYNSSKLLQRIV KTRSIRDFFSRDT >Mature_413_residues MMSFNPRICSTCRGRGFCGLSYCPVIARARASIKLSGITGQRVIEGSTPPSLFVGRYGYPYVRAGPGAAPPNNDVLVYDY PESWLGRRIEDILEYRWSLVTGYTSIDVRKPYDRIVEETRLMTLSSRPVDIRVELAKPPRPILHLSEEEPPQGPRAPIVR LQVLGNPSVPRPVEKAFNDTDLPAYDAVVYLYKSNIPVSHIQKILSAGALGVKNQRRLVPTRWSITAVDSMISRELLREV KKYDVINEIEVYILRHYDNLFIAVLYPAKWSYEWMEAWWPGSTWNPGALDVVVEGDYEDYHGRTTYPGIGGCYYASMLAT LEHLSRMRRQATAILLREIYPGFNLPLGVWFVRESIREMYRHEPILKTSKLKEVFDLLDKVTRLGATKWYNSSKLLQRIV KTRSIRDFFSRDT
Specific function: Unknown
COG id: COG1602
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47387; Mature: 47387
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSFNPRICSTCRGRGFCGLSYCPVIARARASIKLSGITGQRVIEGSTPPSLFVGRYGYP CCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEEECCCCC YVRAGPGAAPPNNDVLVYDYPESWLGRRIEDILEYRWSLVTGYTSIDVRKPYDRIVEETR EEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH LMTLSSRPVDIRVELAKPPRPILHLSEEEPPQGPRAPIVRLQVLGNPSVPRPVEKAFNDT HEEECCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCC DLPAYDAVVYLYKSNIPVSHIQKILSAGALGVKNQRRLVPTRWSITAVDSMISRELLREV CCCHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KKYDVINEIEVYILRHYDNLFIAVLYPAKWSYEWMEAWWPGSTWNPGALDVVVEGDYEDY HHCCCHHHHHHEEEEECCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHC HGRTTYPGIGGCYYASMLATLEHLSRMRRQATAILLREIYPGFNLPLGVWFVRESIREMY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RHEPILKTSKLKEVFDLLDKVTRLGATKWYNSSKLLQRIVKTRSIRDFFSRDT HCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MMSFNPRICSTCRGRGFCGLSYCPVIARARASIKLSGITGQRVIEGSTPPSLFVGRYGYP CCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEEECCCCC YVRAGPGAAPPNNDVLVYDYPESWLGRRIEDILEYRWSLVTGYTSIDVRKPYDRIVEETR EEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH LMTLSSRPVDIRVELAKPPRPILHLSEEEPPQGPRAPIVRLQVLGNPSVPRPVEKAFNDT HEEECCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCC DLPAYDAVVYLYKSNIPVSHIQKILSAGALGVKNQRRLVPTRWSITAVDSMISRELLREV CCCHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH KKYDVINEIEVYILRHYDNLFIAVLYPAKWSYEWMEAWWPGSTWNPGALDVVVEGDYEDY HHCCCHHHHHHEEEEECCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHC HGRTTYPGIGGCYYASMLATLEHLSRMRRQATAILLREIYPGFNLPLGVWFVRESIREMY CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RHEPILKTSKLKEVFDLLDKVTRLGATKWYNSSKLLQRIVKTRSIRDFFSRDT HCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA