Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883690

Identifier: 218883690

GI number: 218883690

Start: 351989

End: 353230

Strand: Direct

Name: 218883690

Synonym: DKAM_0379

Alternate gene names: NA

Gene position: 351989-353230 (Clockwise)

Preceding gene: 218883689

Following gene: 218883691

Centisome position: 25.78

GC content: 47.1

Gene sequence:

>1242_bases
ATGATGAGCTTTAATCCCAGGATCTGTTCTACATGCCGGGGCCGGGGCTTCTGCGGGTTATCCTACTGCCCTGTTATAGC
TAGGGCTAGAGCATCCATTAAGCTATCGGGGATCACTGGCCAGCGTGTGATAGAGGGTTCCACCCCGCCCTCATTATTTG
TTGGGAGATATGGTTATCCATATGTTAGAGCAGGTCCAGGCGCTGCTCCTCCAAACAATGATGTACTAGTGTATGATTAC
CCTGAATCATGGCTTGGAAGAAGGATAGAGGACATCCTTGAATATAGATGGAGCCTTGTAACAGGATATACCAGTATAGA
TGTGAGAAAGCCGTATGATAGGATAGTTGAAGAGACAAGACTCATGACCCTGAGCAGTAGACCTGTGGATATTAGAGTAG
AGTTAGCTAAGCCACCGCGTCCAATATTACATCTCAGCGAAGAGGAACCACCGCAGGGCCCTAGGGCACCAATAGTAAGG
CTACAGGTATTAGGCAATCCCTCTGTGCCTAGGCCCGTGGAGAAGGCGTTTAATGATACGGATCTACCAGCCTATGACGC
GGTGGTCTACCTCTATAAGTCAAATATACCGGTTTCCCATATACAGAAGATACTCAGTGCCGGAGCACTAGGTGTTAAAA
ACCAGAGGAGACTGGTACCTACAAGGTGGAGCATCACCGCTGTTGACAGCATGATATCCAGGGAACTGCTTAGAGAGGTG
AAAAAATATGACGTTATCAACGAGATAGAGGTATACATACTTAGGCACTACGATAACTTATTCATAGCAGTACTCTACCC
AGCTAAGTGGAGTTATGAATGGATGGAAGCCTGGTGGCCAGGCTCCACATGGAACCCTGGAGCCCTGGACGTGGTTGTTG
AGGGAGACTATGAGGACTATCATGGGAGAACAACTTATCCAGGTATTGGTGGATGCTACTATGCAAGCATGCTTGCGACA
CTTGAGCATCTTTCAAGGATGAGAAGACAGGCTACAGCGATACTACTTAGGGAGATATATCCAGGTTTCAATCTACCATT
GGGTGTCTGGTTTGTCAGGGAGTCGATTAGAGAGATGTACAGGCATGAACCAATCTTAAAGACCAGCAAGTTAAAGGAGG
TCTTCGATCTACTGGATAAGGTAACCAGGCTCGGGGCTACTAAATGGTACAATTCCTCCAAGCTGCTTCAGAGGATTGTA
AAAACGAGGAGTATTAGAGACTTCTTCTCGAGGGATACCTGA

Upstream 100 bases:

>100_bases
GGTCTGGCTAGATAGAGACGACCTCATCTAGATGAATAATTTAAATTAAGGTGTGGTAAGTTTAATTATAGTTAATTGTA
TAGGGTGATAGGAGCAAGTT

Downstream 100 bases:

>100_bases
GTTGTTCCAGGAGTTTAAAGTAATAAAGACAAGGTGTGAGACAGCCCTATCGAGGAGCGGGTTGCCGGGACTAAACTATG
CTTTAAACCCCTATGTCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MMSFNPRICSTCRGRGFCGLSYCPVIARARASIKLSGITGQRVIEGSTPPSLFVGRYGYPYVRAGPGAAPPNNDVLVYDY
PESWLGRRIEDILEYRWSLVTGYTSIDVRKPYDRIVEETRLMTLSSRPVDIRVELAKPPRPILHLSEEEPPQGPRAPIVR
LQVLGNPSVPRPVEKAFNDTDLPAYDAVVYLYKSNIPVSHIQKILSAGALGVKNQRRLVPTRWSITAVDSMISRELLREV
KKYDVINEIEVYILRHYDNLFIAVLYPAKWSYEWMEAWWPGSTWNPGALDVVVEGDYEDYHGRTTYPGIGGCYYASMLAT
LEHLSRMRRQATAILLREIYPGFNLPLGVWFVRESIREMYRHEPILKTSKLKEVFDLLDKVTRLGATKWYNSSKLLQRIV
KTRSIRDFFSRDT

Sequences:

>Translated_413_residues
MMSFNPRICSTCRGRGFCGLSYCPVIARARASIKLSGITGQRVIEGSTPPSLFVGRYGYPYVRAGPGAAPPNNDVLVYDY
PESWLGRRIEDILEYRWSLVTGYTSIDVRKPYDRIVEETRLMTLSSRPVDIRVELAKPPRPILHLSEEEPPQGPRAPIVR
LQVLGNPSVPRPVEKAFNDTDLPAYDAVVYLYKSNIPVSHIQKILSAGALGVKNQRRLVPTRWSITAVDSMISRELLREV
KKYDVINEIEVYILRHYDNLFIAVLYPAKWSYEWMEAWWPGSTWNPGALDVVVEGDYEDYHGRTTYPGIGGCYYASMLAT
LEHLSRMRRQATAILLREIYPGFNLPLGVWFVRESIREMYRHEPILKTSKLKEVFDLLDKVTRLGATKWYNSSKLLQRIV
KTRSIRDFFSRDT
>Mature_413_residues
MMSFNPRICSTCRGRGFCGLSYCPVIARARASIKLSGITGQRVIEGSTPPSLFVGRYGYPYVRAGPGAAPPNNDVLVYDY
PESWLGRRIEDILEYRWSLVTGYTSIDVRKPYDRIVEETRLMTLSSRPVDIRVELAKPPRPILHLSEEEPPQGPRAPIVR
LQVLGNPSVPRPVEKAFNDTDLPAYDAVVYLYKSNIPVSHIQKILSAGALGVKNQRRLVPTRWSITAVDSMISRELLREV
KKYDVINEIEVYILRHYDNLFIAVLYPAKWSYEWMEAWWPGSTWNPGALDVVVEGDYEDYHGRTTYPGIGGCYYASMLAT
LEHLSRMRRQATAILLREIYPGFNLPLGVWFVRESIREMYRHEPILKTSKLKEVFDLLDKVTRLGATKWYNSSKLLQRIV
KTRSIRDFFSRDT

Specific function: Unknown

COG id: COG1602

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47387; Mature: 47387

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSFNPRICSTCRGRGFCGLSYCPVIARARASIKLSGITGQRVIEGSTPPSLFVGRYGYP
CCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEEECCCCC
YVRAGPGAAPPNNDVLVYDYPESWLGRRIEDILEYRWSLVTGYTSIDVRKPYDRIVEETR
EEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH
LMTLSSRPVDIRVELAKPPRPILHLSEEEPPQGPRAPIVRLQVLGNPSVPRPVEKAFNDT
HEEECCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCC
DLPAYDAVVYLYKSNIPVSHIQKILSAGALGVKNQRRLVPTRWSITAVDSMISRELLREV
CCCHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KKYDVINEIEVYILRHYDNLFIAVLYPAKWSYEWMEAWWPGSTWNPGALDVVVEGDYEDY
HHCCCHHHHHHEEEEECCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHC
HGRTTYPGIGGCYYASMLATLEHLSRMRRQATAILLREIYPGFNLPLGVWFVRESIREMY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RHEPILKTSKLKEVFDLLDKVTRLGATKWYNSSKLLQRIVKTRSIRDFFSRDT
HCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMSFNPRICSTCRGRGFCGLSYCPVIARARASIKLSGITGQRVIEGSTPPSLFVGRYGYP
CCCCCCCHHHHHCCCCCCCCHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEEECCCCC
YVRAGPGAAPPNNDVLVYDYPESWLGRRIEDILEYRWSLVTGYTSIDVRKPYDRIVEETR
EEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH
LMTLSSRPVDIRVELAKPPRPILHLSEEEPPQGPRAPIVRLQVLGNPSVPRPVEKAFNDT
HEEECCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHCCCC
DLPAYDAVVYLYKSNIPVSHIQKILSAGALGVKNQRRLVPTRWSITAVDSMISRELLREV
CCCHHHEEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
KKYDVINEIEVYILRHYDNLFIAVLYPAKWSYEWMEAWWPGSTWNPGALDVVVEGDYEDY
HHCCCHHHHHHEEEEECCCEEEEEEECCCCCHHHHHHCCCCCCCCCCCEEEEEECCCHHC
HGRTTYPGIGGCYYASMLATLEHLSRMRRQATAILLREIYPGFNLPLGVWFVRESIREMY
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
RHEPILKTSKLKEVFDLLDKVTRLGATKWYNSSKLLQRIVKTRSIRDFFSRDT
HCCCCHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA