| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
Click here to switch to the map view.
The map label for this gene is 218883681
Identifier: 218883681
GI number: 218883681
Start: 342802
End: 343200
Strand: Reverse
Name: 218883681
Synonym: DKAM_0370
Alternate gene names: NA
Gene position: 343200-342802 (Counterclockwise)
Preceding gene: 218883682
Following gene: 218883680
Centisome position: 25.14
GC content: 41.35
Gene sequence:
>399_bases ATGGGCGGGAATTTAAAGAAGAGGTTTGGTGTGAGCGTGCCCTACCATGTGGCGGAGAAACTGGATAATCTAGCCGGATT ATTTCACTGTGATAGATCTACTATAGTATCGAATGCTTTAAACGAGTATATACATGAGAATCTCCACGAGGATAGGGAGC ACAAGTGTCGTGGTGTAATAGTTGTTTACTCGCAGAGCCCGCTGCCCTCCTCTATTATTTCGAGATACAGCTCTGTTATT ACATCGTATAGTGTTCATAGGATGGGGAATGAATTTATAATAGTGATAATAGTTGAGGGATCTTCTAAACTAATAAGTGA GTTGAGAAGACTTGTCTCATCAGGCTCCAAGATCCAGAGGTATCTCCCATTAGATGATTTAAACGTGTTAAGCCAGTAG
Upstream 100 bases:
>100_bases TGTGGCTGCAGTAAACTATGGATTAAGCCCTGTAGGTGTAAGTGGTTTTATCCTTGTCATCGCTTTTCTATATGTGGCGC TCACAGGGTGGGGAAGATAG
Downstream 100 bases:
>100_bases ATTAAATGAGTCCAGGTATGAACCGTGCCCGAGGCATTTGTATTTAAACCCGTGAAAGGATACTGGTTCACTTTTTTCAC TATTGATGAGCTGAAGCGTT
Product: putative CopG family transcriptional regulator
Products: NA
Alternate protein names: CopG Family Transcriptional Regulator
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MGGNLKKRFGVSVPYHVAEKLDNLAGLFHCDRSTIVSNALNEYIHENLHEDREHKCRGVIVVYSQSPLPSSIISRYSSVI TSYSVHRMGNEFIIVIIVEGSSKLISELRRLVSSGSKIQRYLPLDDLNVLSQ
Sequences:
>Translated_132_residues MGGNLKKRFGVSVPYHVAEKLDNLAGLFHCDRSTIVSNALNEYIHENLHEDREHKCRGVIVVYSQSPLPSSIISRYSSVI TSYSVHRMGNEFIIVIIVEGSSKLISELRRLVSSGSKIQRYLPLDDLNVLSQ >Mature_131_residues GGNLKKRFGVSVPYHVAEKLDNLAGLFHCDRSTIVSNALNEYIHENLHEDREHKCRGVIVVYSQSPLPSSIISRYSSVIT SYSVHRMGNEFIIVIIVEGSSKLISELRRLVSSGSKIQRYLPLDDLNVLSQ
Specific function: Unknown
COG id: COG0864
COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14842; Mature: 14711
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGNLKKRFGVSVPYHVAEKLDNLAGLFHCDRSTIVSNALNEYIHENLHEDREHKCRGVI CCCCCCHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE VVYSQSPLPSSIISRYSSVITSYSVHRMGNEFIIVIIVEGSSKLISELRRLVSSGSKIQR EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHH YLPLDDLNVLSQ CCCCCHHHHHCC >Mature Secondary Structure GGNLKKRFGVSVPYHVAEKLDNLAGLFHCDRSTIVSNALNEYIHENLHEDREHKCRGVI CCCCCHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEE VVYSQSPLPSSIISRYSSVITSYSVHRMGNEFIIVIIVEGSSKLISELRRLVSSGSKIQR EEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHHH YLPLDDLNVLSQ CCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA