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The map label for this gene is amyA [H]

Identifier: 218883662

GI number: 218883662

Start: 323325

End: 325265

Strand: Direct

Name: amyA [H]

Synonym: DKAM_0351

Alternate gene names: 218883662

Gene position: 323325-325265 (Clockwise)

Preceding gene: 218883661

Following gene: 218883663

Centisome position: 23.68

GC content: 44.82

Gene sequence:

>1941_bases
GTGGTATATATGTCAAAGGTAAACTTCATATTTGCACTTCACTTCCATCAGCCCACCGGTCAGTTAAAGAGGATAAATGA
AAAGATATTTGAAAACAGCTATAAATTATTACTAGATGTCTTCAAGTCCTTTTCTGACCTGAAGTTCACGATACATATAA
GTGGCCCCCTCCTACTCTACTTAGCTAAAAACCACCCTGAATGGCTTGAAGAAGTCTTTAAACTAGGCGATCTAGGCTCA
CTTGAATTCATGGCTGGTAGTATTGGCGAGTCAATACTGCCTATAATACCGAGGGACGACAGGGAATACCAGATAAGGGA
GTACATTAAGATATTTGAGGAGCTCTCGGGCTTTAAGCCGAGGGGTCTATGGATACCTGAAAGAATATGGGAGCCGCATT
TACCTGAGGTTATAGGGAGGCTTGGATTAGAGTACGTGTTCATAGATGACTCGACCTTAACCAAGACAGGGTACCCCCAT
GACCTGGCTTATTACTCGTGGATCACTGAGGATAGTGGACAAGTAGTAAGGGTCTTCTTCATAGATGCTGGGATAAGGTA
TATTCTGCCCTGGGAACCACCGCAGAGGGTCCTCGAGTACCTTATCGGTAAGATAAAGGAGGGTGATCCAGCGAGGCTCA
TCTTATGGGGTAGTGACGCGGAGAAGTTTGGGGAGTGGATGGACTCGGGACATAGTAGAAGCTGGCTCTACGCATTCCTA
GACTTGATGAGGAGAACCCGTAGCAGGGTATCTATGATCCATCCAAGCGAATATCTTAGTGAATACGGGGTTAAAGGATT
ACTATACCTCGATACTGGGAGCTATGATAAAATGCTTGAGTGGAGCAGAGGTTTCTTCAGAAACTTCCTGGTGAAGTACA
AGGAAGCAGACAACATGCATAAGAAGATGTTATGGGTTAAAAAGAAGCTGGAGAAAGCTGGTGATTTACCTAGAGAGCTA
AGAGTAGAGTATCTCCTCGCACAGTGTAATGATGCATACTGGCATGGATTATTTGGAGGCGTGTATCTGGCGCACTTGAG
GCAGGCAATATATGAGAAACTCCTCAAGGTTGAGAGGTGGGCTGAGGAGAAAAGCAATTACTTCAGCGGCGAGGACTTCA
GAAAGATGATGGTAGATTTCGACTATGATGGCTTATCAGAACTATTACTTGAGACACCGATGCAAAACCTATATATAAAG
CCAAGTGATGGCGGGACACTCTTCGAGTACGATGTGAAAATCAAGGGGTTCGAGCATAATCTACAGGACACTATGACAAG
ATACGGTGAGCCATACCTAAATAAACCTGGATTCAATCCAGACTGGTATAGAAGGGTGAGCTGGAGGCTACATCTATGGA
GCCCGGATACAGGTCTCTACGACTGGATAAACAATACGCCGTTTAAAGACATGAGCGATCTAGCGTTAAAGAACTACCAT
GTAGCCTCAGGAGAGGAAGGAGAGGTTGTTCTAAGAGCCCTAGGCGGGTTCTACCAGTATGGCAGTCCACCAGTAATGGT
TACAGCGGAAAAAATGGTGCGTTTAACAAGCAATGGTCACACCACGTTGTTCAGGGTTAGAAACATCGGTGATAGAGAGT
TCACGGCTAAATTAGGCATAGAGTACCATGTTGCATGGAAGATAGATAGAGAGAACGAGGCGAAACCATACTACACCATA
AACGGCGTAAACAGAGATGTAAGTGAGGGAGGGGTATTCAACACCGAGAGAATAACTATAAAATCCCCCGTCTACCCAGG
CATAAGGTTAGAGAGCAATACTCATCACGAGGTATGGATTGCCCAGCTCTCATCATACTCTAGAACCGAGAAAGGATTTA
TGGAGATACCACAGGGTCTGGCAATAATGTTCGTGGAACAGCTCTCATTGAAACCTGGTGAGGAATATGAGACAAGTATA
TCCTGGATCCTGGAAATATAG

Upstream 100 bases:

>100_bases
AGACGTTGTAGAAGAATTAAGGAGGCTACGTGAAAACATTATTTCATATAGCGAGCTTATCTCAACACTTAAGAAACTGC
TCTTGGAAATAATCGAGTAG

Downstream 100 bases:

>100_bases
TGAAGGGTGCTTTCAGCTTGAAAGCATGGATGTTCGCGTTTGAATCAATATATACTAGGAAAGTGGGAGGACTAGCCGAA
GTACCACCAAGGCTCGCTAA

Product: glycoside hydrolase, family 57

Products: NA

Alternate protein names: 1,4-alpha-D-glucan glucanohydrolase [H]

Number of amino acids: Translated: 646; Mature: 646

Protein sequence:

>646_residues
MVYMSKVNFIFALHFHQPTGQLKRINEKIFENSYKLLLDVFKSFSDLKFTIHISGPLLLYLAKNHPEWLEEVFKLGDLGS
LEFMAGSIGESILPIIPRDDREYQIREYIKIFEELSGFKPRGLWIPERIWEPHLPEVIGRLGLEYVFIDDSTLTKTGYPH
DLAYYSWITEDSGQVVRVFFIDAGIRYILPWEPPQRVLEYLIGKIKEGDPARLILWGSDAEKFGEWMDSGHSRSWLYAFL
DLMRRTRSRVSMIHPSEYLSEYGVKGLLYLDTGSYDKMLEWSRGFFRNFLVKYKEADNMHKKMLWVKKKLEKAGDLPREL
RVEYLLAQCNDAYWHGLFGGVYLAHLRQAIYEKLLKVERWAEEKSNYFSGEDFRKMMVDFDYDGLSELLLETPMQNLYIK
PSDGGTLFEYDVKIKGFEHNLQDTMTRYGEPYLNKPGFNPDWYRRVSWRLHLWSPDTGLYDWINNTPFKDMSDLALKNYH
VASGEEGEVVLRALGGFYQYGSPPVMVTAEKMVRLTSNGHTTLFRVRNIGDREFTAKLGIEYHVAWKIDRENEAKPYYTI
NGVNRDVSEGGVFNTERITIKSPVYPGIRLESNTHHEVWIAQLSSYSRTEKGFMEIPQGLAIMFVEQLSLKPGEEYETSI
SWILEI

Sequences:

>Translated_646_residues
MVYMSKVNFIFALHFHQPTGQLKRINEKIFENSYKLLLDVFKSFSDLKFTIHISGPLLLYLAKNHPEWLEEVFKLGDLGS
LEFMAGSIGESILPIIPRDDREYQIREYIKIFEELSGFKPRGLWIPERIWEPHLPEVIGRLGLEYVFIDDSTLTKTGYPH
DLAYYSWITEDSGQVVRVFFIDAGIRYILPWEPPQRVLEYLIGKIKEGDPARLILWGSDAEKFGEWMDSGHSRSWLYAFL
DLMRRTRSRVSMIHPSEYLSEYGVKGLLYLDTGSYDKMLEWSRGFFRNFLVKYKEADNMHKKMLWVKKKLEKAGDLPREL
RVEYLLAQCNDAYWHGLFGGVYLAHLRQAIYEKLLKVERWAEEKSNYFSGEDFRKMMVDFDYDGLSELLLETPMQNLYIK
PSDGGTLFEYDVKIKGFEHNLQDTMTRYGEPYLNKPGFNPDWYRRVSWRLHLWSPDTGLYDWINNTPFKDMSDLALKNYH
VASGEEGEVVLRALGGFYQYGSPPVMVTAEKMVRLTSNGHTTLFRVRNIGDREFTAKLGIEYHVAWKIDRENEAKPYYTI
NGVNRDVSEGGVFNTERITIKSPVYPGIRLESNTHHEVWIAQLSSYSRTEKGFMEIPQGLAIMFVEQLSLKPGEEYETSI
SWILEI
>Mature_646_residues
MVYMSKVNFIFALHFHQPTGQLKRINEKIFENSYKLLLDVFKSFSDLKFTIHISGPLLLYLAKNHPEWLEEVFKLGDLGS
LEFMAGSIGESILPIIPRDDREYQIREYIKIFEELSGFKPRGLWIPERIWEPHLPEVIGRLGLEYVFIDDSTLTKTGYPH
DLAYYSWITEDSGQVVRVFFIDAGIRYILPWEPPQRVLEYLIGKIKEGDPARLILWGSDAEKFGEWMDSGHSRSWLYAFL
DLMRRTRSRVSMIHPSEYLSEYGVKGLLYLDTGSYDKMLEWSRGFFRNFLVKYKEADNMHKKMLWVKKKLEKAGDLPREL
RVEYLLAQCNDAYWHGLFGGVYLAHLRQAIYEKLLKVERWAEEKSNYFSGEDFRKMMVDFDYDGLSELLLETPMQNLYIK
PSDGGTLFEYDVKIKGFEHNLQDTMTRYGEPYLNKPGFNPDWYRRVSWRLHLWSPDTGLYDWINNTPFKDMSDLALKNYH
VASGEEGEVVLRALGGFYQYGSPPVMVTAEKMVRLTSNGHTTLFRVRNIGDREFTAKLGIEYHVAWKIDRENEAKPYYTI
NGVNRDVSEGGVFNTERITIKSPVYPGIRLESNTHHEVWIAQLSSYSRTEKGFMEIPQGLAIMFVEQLSLKPGEEYETSI
SWILEI

Specific function: This amylase is a highly liquefying-type:oligomers appeared at the beginning of incubation, followed by a graded decrease in the amounts of maltotriose, maltose and glucose in prolonged incubation [H]

COG id: COG1449

COG function: function code G; Alpha-amylase/alpha-mannosidase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 57 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015179
- InterPro:   IPR015178
- InterPro:   IPR011013
- InterPro:   IPR011330
- InterPro:   IPR000602
- InterPro:   IPR004300
- ProDom:   PD014405 [H]

Pfam domain/function: PF09094 DUF1925; PF09095 DUF1926; PF03065 Glyco_hydro_57 [H]

EC number: =3.2.1.1 [H]

Molecular weight: Translated: 75587; Mature: 75587

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYMSKVNFIFALHFHQPTGQLKRINEKIFENSYKLLLDVFKSFSDLKFTIHISGPLLLY
CEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEE
LAKNHPEWLEEVFKLGDLGSLEFMAGSIGESILPIIPRDDREYQIREYIKIFEELSGFKP
EECCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
RGLWIPERIWEPHLPEVIGRLGLEYVFIDDSTLTKTGYPHDLAYYSWITEDSGQVVRVFF
CCCCCCHHHCCCCHHHHHHHCCCEEEEECCCCEECCCCCCCEEEEEEEECCCCCEEEEEE
IDAGIRYILPWEPPQRVLEYLIGKIKEGDPARLILWGSDAEKFGEWMDSGHSRSWLYAFL
EECCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHH
DLMRRTRSRVSMIHPSEYLSEYGVKGLLYLDTGSYDKMLEWSRGFFRNFLVKYKEADNMH
HHHHHHHHHHEECCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KKMLWVKKKLEKAGDLPRELRVEYLLAQCNDAYWHGLFGGVYLAHLRQAIYEKLLKVERW
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEEKSNYFSGEDFRKMMVDFDYDGLSELLLETPMQNLYIKPSDGGTLFEYDVKIKGFEHN
HHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCHHHEEEEECCCCEEEEEEEEEECCCCC
LQDTMTRYGEPYLNKPGFNPDWYRRVSWRLHLWSPDTGLYDWINNTPFKDMSDLALKNYH
HHHHHHHCCCCCCCCCCCCHHHHEEEEEEEEEECCCCCHHHHCCCCCCCCHHHHHHHCEE
VASGEEGEVVLRALGGFYQYGSPPVMVTAEKMVRLTSNGHTTLFRVRNIGDREFTAKLGI
ECCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHEECCCCCEEEEEEECCCCCCEEEEECE
EYHVAWKIDRENEAKPYYTINGVNRDVSEGGVFNTERITIKSPVYPGIRLESNTHHEVWI
EEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCHHHH
AQLSSYSRTEKGFMEIPQGLAIMFVEQLSLKPGEEYETSISWILEI
HHHHHCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCHHCCEEEEEEC
>Mature Secondary Structure
MVYMSKVNFIFALHFHQPTGQLKRINEKIFENSYKLLLDVFKSFSDLKFTIHISGPLLLY
CEEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEE
LAKNHPEWLEEVFKLGDLGSLEFMAGSIGESILPIIPRDDREYQIREYIKIFEELSGFKP
EECCCHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
RGLWIPERIWEPHLPEVIGRLGLEYVFIDDSTLTKTGYPHDLAYYSWITEDSGQVVRVFF
CCCCCCHHHCCCCHHHHHHHCCCEEEEECCCCEECCCCCCCEEEEEEEECCCCCEEEEEE
IDAGIRYILPWEPPQRVLEYLIGKIKEGDPARLILWGSDAEKFGEWMDSGHSRSWLYAFL
EECCCEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHHHHHH
DLMRRTRSRVSMIHPSEYLSEYGVKGLLYLDTGSYDKMLEWSRGFFRNFLVKYKEADNMH
HHHHHHHHHHEECCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KKMLWVKKKLEKAGDLPRELRVEYLLAQCNDAYWHGLFGGVYLAHLRQAIYEKLLKVERW
HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEEKSNYFSGEDFRKMMVDFDYDGLSELLLETPMQNLYIKPSDGGTLFEYDVKIKGFEHN
HHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCHHHEEEEECCCCEEEEEEEEEECCCCC
LQDTMTRYGEPYLNKPGFNPDWYRRVSWRLHLWSPDTGLYDWINNTPFKDMSDLALKNYH
HHHHHHHCCCCCCCCCCCCHHHHEEEEEEEEEECCCCCHHHHCCCCCCCCHHHHHHHCEE
VASGEEGEVVLRALGGFYQYGSPPVMVTAEKMVRLTSNGHTTLFRVRNIGDREFTAKLGI
ECCCCCCHHHHHHHHHHHHCCCCCEEEEHHHHHEECCCCCEEEEEEECCCCCCEEEEECE
EYHVAWKIDRENEAKPYYTINGVNRDVSEGGVFNTERITIKSPVYPGIRLESNTHHEVWI
EEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCHHHH
AQLSSYSRTEKGFMEIPQGLAIMFVEQLSLKPGEEYETSISWILEI
HHHHHCCCCCHHHHHCCCCHHHHHHHHHCCCCCCCHHCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2453362 [H]