Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883660

Identifier: 218883660

GI number: 218883660

Start: 320380

End: 321783

Strand: Direct

Name: 218883660

Synonym: DKAM_0349

Alternate gene names: NA

Gene position: 320380-321783 (Clockwise)

Preceding gene: 218883659

Following gene: 218883661

Centisome position: 23.47

GC content: 46.08

Gene sequence:

>1404_bases
ATGGGTAAGCTATTCGAGCACATCATAGGCAGCTATCTTCCCCAGGCCAGGTGGTGGCCCTGGAAGAATACCAGGGTAAA
TGTAGAGGTCGTGGATGAGGTAAACTACGGTAACGTATTGCTATTATTTTTTAGATCAGGAGACATATTTTTTCACCTAC
CCCTGGCGAAAGTCAGTGAACTGCCAGGGGGTTTGGAGTCACGTGGATTCTGCCTCGATAATGAATGTTATGTAGAGGCA
GAGTATCTTTCCTCCTACATGGACCTCATAAGTATGATTCAAGGTGTCTCGATAGAGTATCACAGGTCGAATAGGCTACC
CAAGATAGTTAAGGCTAAACCCCTCACGTTTGAGTCAACGAACTCGGTTACCCTTTATGAGGCGGAGAATGGCGGCAAGC
TTGTTTTAAAAAGCTATAGAGTAATACCGGTGGTCAACATTGAGGCACAGATGCTGAGGAAACTTACTGAAGAGAAGTAC
GCTCATATCCCCGAGATTATTGCGTTCTTGAAGTATAAGGATATGACCACCGGTGTACTTTCAAGGTATGTAGAGGGGGC
CGGTGATGGCGGCTATCCCTTCTACAACGCATTATTAGAGTACTTGGGTAGTAAGGTTCGTGGGTCTAGGCTCGGGCTCG
CCTCGAAGCTCGGTATTATTATTTCAGGTCTTCACAAAGCCTTGAATAAGGATAGTGAAGGCTTCTTCAGCGTTGAGCCG
GCTTCAAGTAATGATATTAAACAGTGGTGTTCACGCATCGAGAAAATGTACTCAGGAAGCCTGAAGAGATTGGATGAGAT
AAATACAGGGGGACTGGATTACTGGCGTGGTATGCTTGAGAAGGCCCGGGACATAGTGGAGGATGCTATATCACTGCTTG
AGGTCTACAATGGTTTATCGAAGGCTAGGATACATCAAGACCTGCATCTTGGGCAGATGATATATGTTAAAAACATAGCG
GAGGACTTCATCATAGTTGACTTCGAGGGGGAGCCTGGTAGGAGTATCGAGGAGAGACTGTCAAAGGAGCCTGTGACAAG
GGATGTGGCGTCGATGATAAGGAGCTTCCACTATCTCTCACACGCCGCAATAATGCATTACAGTGGTAGAAGCCAGGATG
AGGTTTCACGTTTAATGATCGAGGATGATCCTTCTACTAAGTGGAGGCTTAACCATGTAAAGGCAATGGTTTACTCCTAC
TCAATGGATATCGACTCAAGTAAACTACTTGGAGTACCTAGGGATAAAATGGTCTCCGAGATAGGGAGGCTCCTTTACCC
ATGGATCATTGAGAGGGCTGTTTACGAGGTCTACTATGAGTCCCTCTATAGGCCCAACTGGGTCTCCATACCTATAGCCG
GCTTATATGAAGCAAGTAGGATCTATAGGGGGTGGATTATTTGA

Upstream 100 bases:

>100_bases
TCTATCTACTTGAAAACAACATTGTTAAAAACGTGGATGACTTGAGAGAATATTTATCCATGATATTGAAAACCATAGAG
GGTTAGAATAGGCGTTTAAA

Downstream 100 bases:

>100_bases
CCGATATAGTCTTAATGTTCGAGGTCCATCAACCATATAGGTTAAGGAGAAATCTTCACTCAATACTGCTTGAAAAAGCA
TTGAGCGGTAGACTTGAGTT

Product: alpha amylase

Products: NA

Alternate protein names: Aminoglycoside Phosphotransferase; Alpha Amylase Domain-Containing Protein; Trehalose Synthase-Like; Pep2 Protein; Trehalose Synthase/ Maltokinase; Alpha Amylase Catalytic Region; Sugar Phosphotransferase; Trehalose Synthase/Maltokinase; Trehalose Synthase-Fused Maltokinase-Like Protein; Alpha-Glucosidase; Alpha Amylase; 1 4-Alpha-Glucan Branching; Trehalose Synthase-Like Protein; Trehalose Synthase-Fused Maltokinase; Alpha Amylase/Trehalose Synthase; Bifunctional Trehalose/Maltose Transglucosylase/Maltokinase; Glycogen Branching; 4-Alpha-Glucanotransferase; Domain Involved In Trehalose Biosynthesis; Glycoside Hydrolase Family Protein; Trehalose Synthase-Fused Maltokinase; Trehalose Synthas; Alpha-Amylase Family Protein; Protein Probably Involved In Trehalose Biosynthesis; Maltokinase; Trehalose Synthase Protein; Trehalose Synthase Maltokinase Fusion Protein; Trehalose Synthase Maltose Alpha-D-Glucosyltransferase; Alpha-1 4-GlucanAlpha-1 4-Glucan 6-Glycosyltransferase; Trehalose Synthase/Glycosidase Fusion Protein; Alpha Amylase Catalytic Domain Subfamily; Phosphotransferase Family Protein; Trehalose Synthase/ Maltokinase-Like; Alpha Amylase Catalytic Subdomain

Number of amino acids: Translated: 467; Mature: 466

Protein sequence:

>467_residues
MGKLFEHIIGSYLPQARWWPWKNTRVNVEVVDEVNYGNVLLLFFRSGDIFFHLPLAKVSELPGGLESRGFCLDNECYVEA
EYLSSYMDLISMIQGVSIEYHRSNRLPKIVKAKPLTFESTNSVTLYEAENGGKLVLKSYRVIPVVNIEAQMLRKLTEEKY
AHIPEIIAFLKYKDMTTGVLSRYVEGAGDGGYPFYNALLEYLGSKVRGSRLGLASKLGIIISGLHKALNKDSEGFFSVEP
ASSNDIKQWCSRIEKMYSGSLKRLDEINTGGLDYWRGMLEKARDIVEDAISLLEVYNGLSKARIHQDLHLGQMIYVKNIA
EDFIIVDFEGEPGRSIEERLSKEPVTRDVASMIRSFHYLSHAAIMHYSGRSQDEVSRLMIEDDPSTKWRLNHVKAMVYSY
SMDIDSSKLLGVPRDKMVSEIGRLLYPWIIERAVYEVYYESLYRPNWVSIPIAGLYEASRIYRGWII

Sequences:

>Translated_467_residues
MGKLFEHIIGSYLPQARWWPWKNTRVNVEVVDEVNYGNVLLLFFRSGDIFFHLPLAKVSELPGGLESRGFCLDNECYVEA
EYLSSYMDLISMIQGVSIEYHRSNRLPKIVKAKPLTFESTNSVTLYEAENGGKLVLKSYRVIPVVNIEAQMLRKLTEEKY
AHIPEIIAFLKYKDMTTGVLSRYVEGAGDGGYPFYNALLEYLGSKVRGSRLGLASKLGIIISGLHKALNKDSEGFFSVEP
ASSNDIKQWCSRIEKMYSGSLKRLDEINTGGLDYWRGMLEKARDIVEDAISLLEVYNGLSKARIHQDLHLGQMIYVKNIA
EDFIIVDFEGEPGRSIEERLSKEPVTRDVASMIRSFHYLSHAAIMHYSGRSQDEVSRLMIEDDPSTKWRLNHVKAMVYSY
SMDIDSSKLLGVPRDKMVSEIGRLLYPWIIERAVYEVYYESLYRPNWVSIPIAGLYEASRIYRGWII
>Mature_466_residues
GKLFEHIIGSYLPQARWWPWKNTRVNVEVVDEVNYGNVLLLFFRSGDIFFHLPLAKVSELPGGLESRGFCLDNECYVEAE
YLSSYMDLISMIQGVSIEYHRSNRLPKIVKAKPLTFESTNSVTLYEAENGGKLVLKSYRVIPVVNIEAQMLRKLTEEKYA
HIPEIIAFLKYKDMTTGVLSRYVEGAGDGGYPFYNALLEYLGSKVRGSRLGLASKLGIIISGLHKALNKDSEGFFSVEPA
SSNDIKQWCSRIEKMYSGSLKRLDEINTGGLDYWRGMLEKARDIVEDAISLLEVYNGLSKARIHQDLHLGQMIYVKNIAE
DFIIVDFEGEPGRSIEERLSKEPVTRDVASMIRSFHYLSHAAIMHYSGRSQDEVSRLMIEDDPSTKWRLNHVKAMVYSYS
MDIDSSKLLGVPRDKMVSEIGRLLYPWIIERAVYEVYYESLYRPNWVSIPIAGLYEASRIYRGWII

Specific function: Unknown

COG id: COG3281

COG function: function code G; Uncharacterized protein, probably involved in trehalose biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53462; Mature: 53331

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLFEHIIGSYLPQARWWPWKNTRVNVEVVDEVNYGNVLLLFFRSGDIFFHLPLAKVSE
CCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCEEEEECHHHHHH
LPGGLESRGFCLDNECYVEAEYLSSYMDLISMIQGVSIEYHRSNRLPKIVKAKPLTFEST
CCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHCCCCCEEECC
NSVTLYEAENGGKLVLKSYRVIPVVNIEAQMLRKLTEEKYAHIPEIIAFLKYKDMTTGVL
CCEEEEEECCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SRYVEGAGDGGYPFYNALLEYLGSKVRGSRLGLASKLGIIISGLHKALNKDSEGFFSVEP
HHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECC
ASSNDIKQWCSRIEKMYSGSLKRLDEINTGGLDYWRGMLEKARDIVEDAISLLEVYNGLS
CCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KARIHQDLHLGQMIYVKNIAEDFIIVDFEGEPGRSIEERLSKEPVTRDVASMIRSFHYLS
HHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
HAAIMHYSGRSQDEVSRLMIEDDPSTKWRLNHVKAMVYSYSMDIDSSKLLGVPRDKMVSE
HHHHEEECCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHH
IGRLLYPWIIERAVYEVYYESLYRPNWVSIPIAGLYEASRIYRGWII
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GKLFEHIIGSYLPQARWWPWKNTRVNVEVVDEVNYGNVLLLFFRSGDIFFHLPLAKVSE
CHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCEEEEEEECCCEEEEECHHHHHH
LPGGLESRGFCLDNECYVEAEYLSSYMDLISMIQGVSIEYHRSNRLPKIVKAKPLTFEST
CCCCCCCCCEEECCCCEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHCCCCCEEECC
NSVTLYEAENGGKLVLKSYRVIPVVNIEAQMLRKLTEEKYAHIPEIIAFLKYKDMTTGVL
CCEEEEEECCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
SRYVEGAGDGGYPFYNALLEYLGSKVRGSRLGLASKLGIIISGLHKALNKDSEGFFSVEP
HHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECC
ASSNDIKQWCSRIEKMYSGSLKRLDEINTGGLDYWRGMLEKARDIVEDAISLLEVYNGLS
CCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
KARIHQDLHLGQMIYVKNIAEDFIIVDFEGEPGRSIEERLSKEPVTRDVASMIRSFHYLS
HHHHHHHHHCCHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
HAAIMHYSGRSQDEVSRLMIEDDPSTKWRLNHVKAMVYSYSMDIDSSKLLGVPRDKMVSE
HHHHEEECCCCHHHHHHHEEECCCCCCHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHH
IGRLLYPWIIERAVYEVYYESLYRPNWVSIPIAGLYEASRIYRGWII
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA