Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883651

Identifier: 218883651

GI number: 218883651

Start: 312767

End: 314026

Strand: Direct

Name: 218883651

Synonym: DKAM_0340

Alternate gene names: NA

Gene position: 312767-314026 (Clockwise)

Preceding gene: 218883650

Following gene: 218883656

Centisome position: 22.91

GC content: 43.1

Gene sequence:

>1260_bases
ATGACCTTGAAGCCGCTGGTTATAAGGGAGATTAAGAACTTCCTAAGGAATCCGGCTTTCATAGCATCGATAATTATACT
AGTGGTATTCTACGCGTCACTGGGAAGCATTATGAGAAGCGGCATAGAGTCAGCTGTGAAAGAGTCGTTGAGCATATCTA
TAGGGATAGTCAAGGAGGAGGACACCGAGCTAGTGAGCCGCCTCATATCAATGCTTTCACAATATACTAATGGTTCTATA
GGTATCTACCAGAGCCTCGAAGAAGCCGTTGATAAAACTGGGGTAGCAATAGTTATACCAAGAGGGTTTACTGAGAACGC
TACACAGTCAGGAAGCACTATATTGCTTAAGGGAGGGGTCAAAATAGATAATCTCTCACCGATCACAGGACAGGCAAGGA
TATCCATGCTACAGGGAATCGCGTCAATAATATCCGACATGCTTCCAGCGGCTACAGGCGTATTATATAATATATCCATA
CCGCCTAGTAGGCCGGTCATGGTTGAAAGCTATGTAAGGGTATATGATAAAACCCTCACAGCCAACGAGTTCAATAGTTT
TATGACCATGTTCTCCATTATACCCGTGGTGATCGGTATAATAGTAGGTATAAATGCTACTTACGCCGCCCAGGCAACAG
CTATAGAGAAAGTTGAGAAAGCCTTTGAAATGCTGCTTGCTCAACCTATTCCACGTAGAAGTGTCGTGATAGCGAAGATC
ATCGGCTCCGTCACTGCATCAGTGATCATGGGGGCAGCTTACATGATCGCATTATTCCTGATGCTGGTCTCAGCTATACC
TGCTGGCACAGCCCTAGGTAATCGATCATCAATAAACCTAGTTGAATCAGTGATCAGTATAGGGGGAACAGGAAATATCC
TGGTATCAATACTTGTAATAATCCTAGGTCTGATATATTCAGGTGCCATTGGCGTAATAATAGGCGCAGTCGTCGCTGAT
GAAAGGATCGCCGGTGCCCTCTCCACACCCATAATACTGTTATTCATGGGTGTAGGATTCGCAACAATCTATATGGGTAT
GCCGTTAAACATGGCGACATCTATCCTATCCGGTTTAACGATTACATCTATACCACTTGTATTAATTAATGCATCACTCT
CAGGACAATATATCTATGCGTGGATATCTATTTCGATAGCCATAACCGTGTCAATATTGTTAATGGTAATTGCTATACTT
GTATTCAACAGAGATATAGTCATACTGGGTCTGAGGATCTCGCTGAGGAAAAGAGAATAA

Upstream 100 bases:

>100_bases
TAATAGCGGAGGGAACTATAGAGGAGTTGAAGAGTAAGACTGGTGGGAGGGATCTAGAGGAGGTATTCATTAAGCTGAAA
ACAGGGGAGGGTGATCATAG

Downstream 100 bases:

>100_bases
GTGGTTTACCCGTGTCTATTATTTTGCTTTAGCTTCTCTGTGCACGGGCATCCCTCTCAGCACCCGCTCACCGCTCGCGG
GGTCGTCGAGGGCTTCATGA

Product: Na+ efflux ABC transporter permease

Products: NA

Alternate protein names: ABC-Type Na+ Efflux Pump Permease Component

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MTLKPLVIREIKNFLRNPAFIASIIILVVFYASLGSIMRSGIESAVKESLSISIGIVKEEDTELVSRLISMLSQYTNGSI
GIYQSLEEAVDKTGVAIVIPRGFTENATQSGSTILLKGGVKIDNLSPITGQARISMLQGIASIISDMLPAATGVLYNISI
PPSRPVMVESYVRVYDKTLTANEFNSFMTMFSIIPVVIGIIVGINATYAAQATAIEKVEKAFEMLLAQPIPRRSVVIAKI
IGSVTASVIMGAAYMIALFLMLVSAIPAGTALGNRSSINLVESVISIGGTGNILVSILVIILGLIYSGAIGVIIGAVVAD
ERIAGALSTPIILLFMGVGFATIYMGMPLNMATSILSGLTITSIPLVLINASLSGQYIYAWISISIAITVSILLMVIAIL
VFNRDIVILGLRISLRKRE

Sequences:

>Translated_419_residues
MTLKPLVIREIKNFLRNPAFIASIIILVVFYASLGSIMRSGIESAVKESLSISIGIVKEEDTELVSRLISMLSQYTNGSI
GIYQSLEEAVDKTGVAIVIPRGFTENATQSGSTILLKGGVKIDNLSPITGQARISMLQGIASIISDMLPAATGVLYNISI
PPSRPVMVESYVRVYDKTLTANEFNSFMTMFSIIPVVIGIIVGINATYAAQATAIEKVEKAFEMLLAQPIPRRSVVIAKI
IGSVTASVIMGAAYMIALFLMLVSAIPAGTALGNRSSINLVESVISIGGTGNILVSILVIILGLIYSGAIGVIIGAVVAD
ERIAGALSTPIILLFMGVGFATIYMGMPLNMATSILSGLTITSIPLVLINASLSGQYIYAWISISIAITVSILLMVIAIL
VFNRDIVILGLRISLRKRE
>Mature_418_residues
TLKPLVIREIKNFLRNPAFIASIIILVVFYASLGSIMRSGIESAVKESLSISIGIVKEEDTELVSRLISMLSQYTNGSIG
IYQSLEEAVDKTGVAIVIPRGFTENATQSGSTILLKGGVKIDNLSPITGQARISMLQGIASIISDMLPAATGVLYNISIP
PSRPVMVESYVRVYDKTLTANEFNSFMTMFSIIPVVIGIIVGINATYAAQATAIEKVEKAFEMLLAQPIPRRSVVIAKII
GSVTASVIMGAAYMIALFLMLVSAIPAGTALGNRSSINLVESVISIGGTGNILVSILVIILGLIYSGAIGVIIGAVVADE
RIAGALSTPIILLFMGVGFATIYMGMPLNMATSILSGLTITSIPLVLINASLSGQYIYAWISISIAITVSILLMVIAILV
FNRDIVILGLRISLRKRE

Specific function: Unknown

COG id: COG1668

COG function: function code CP; ABC-type Na+ efflux pump, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44473; Mature: 44342

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKPLVIREIKNFLRNPAFIASIIILVVFYASLGSIMRSGIESAVKESLSISIGIVKEE
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECC
DTELVSRLISMLSQYTNGSIGIYQSLEEAVDKTGVAIVIPRGFTENATQSGSTILLKGGV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCE
KIDNLSPITGQARISMLQGIASIISDMLPAATGVLYNISIPPSRPVMVESYVRVYDKTLT
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHCC
ANEFNSFMTMFSIIPVVIGIIVGINATYAAQATAIEKVEKAFEMLLAQPIPRRSVVIAKI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IGSVTASVIMGAAYMIALFLMLVSAIPAGTALGNRSSINLVESVISIGGTGNILVSILVI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
ILGLIYSGAIGVIIGAVVADERIAGALSTPIILLFMGVGFATIYMGMPLNMATSILSGLT
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCH
ITSIPLVLINASLSGQYIYAWISISIAITVSILLMVIAILVFNRDIVILGLRISLRKRE
HHHCCCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC
>Mature Secondary Structure 
TLKPLVIREIKNFLRNPAFIASIIILVVFYASLGSIMRSGIESAVKESLSISIGIVKEE
CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECC
DTELVSRLISMLSQYTNGSIGIYQSLEEAVDKTGVAIVIPRGFTENATQSGSTILLKGGV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCEEEEECCE
KIDNLSPITGQARISMLQGIASIISDMLPAATGVLYNISIPPSRPVMVESYVRVYDKTLT
EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCHHHHHHHHHHHHHCC
ANEFNSFMTMFSIIPVVIGIIVGINATYAAQATAIEKVEKAFEMLLAQPIPRRSVVIAKI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
IGSVTASVIMGAAYMIALFLMLVSAIPAGTALGNRSSINLVESVISIGGTGNILVSILVI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH
ILGLIYSGAIGVIIGAVVADERIAGALSTPIILLFMGVGFATIYMGMPLNMATSILSGLT
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCH
ITSIPLVLINASLSGQYIYAWISISIAITVSILLMVIAILVFNRDIVILGLRISLRKRE
HHHCCCCEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA