Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

Click here to switch to the map view.

The map label for this gene is 218883627

Identifier: 218883627

GI number: 218883627

Start: 290885

End: 292132

Strand: Reverse

Name: 218883627

Synonym: DKAM_0316

Alternate gene names: NA

Gene position: 292132-290885 (Counterclockwise)

Preceding gene: 218883628

Following gene: 218883625

Centisome position: 21.4

GC content: 49.28

Gene sequence:

>1248_bases
ATGGCTGATAGGGCTACTATTGCTGTAGTTACTGAGCCTTTTAAACCGTTTTTTGGAGGAGCTATTAGAGCTTCGAGGTC
TATAGAGGCTTATAGGAAAAGCTTCGATGTTCTTGTCTACGAGCTGATTAGAACTAAATCCGATCCTACCTATTCTAGGG
ATAGGAATGTGGTGAAAGTATACAGCGGCCCTGTTCTAAGGGCTCTTTACAAGCTGAGGCTTGGATTCCTCCCAGGGCTG
ACACCCAACGGTATTTCGAAAAGGATGGTAAGGATTGGGAGGGATGTGTCGAAAACGGATGTTAGGGCTGTAGTCTCCCT
TCACGAGGATCTCGAACTTCTCCGCCTATGCTCTATTCTGAGAGAGGAGTATGAAGCTAGATCAGCGGCATTACTGCAAT
TACCGGTGTTTATCAGGGATAGGAGGAGACAGGGGGAGATAATAAGAGCGTATGATAAGTGGTATTCGGCCCTCTACCCG
GGCTTGGTTAAAGAGCTGGCTGGGAAGGTTAGGACAAGGGTCAAGCTCTCTGTTTTGAGTAGCAGGAGTGTTGCCAGGCT
CCTCCGTAGCTACGACCTACTGATCTCCGTGAGCAGGTCTATAGGTTATGAAATGGGGCCTGAATGGGAGTCTAGGATAC
ACGCCCTAGACCCCGGGGTGGGCCTCGACGAGGAAGACCTCGGCTTAATCAAGACGGTTAAAGAGAGGGCTGTTAAAGAA
GACTTTATCGTTTTCGGAGGCAGGATAGACGCCCTTAAAGGCTTTATCGAGGGCTTAGAAGTCTTCAAGGCGATTGCTAG
AGCCTACAGGGATATCAAACTAGTAGCTACAGGGCGGGTGAACCCTTCCCTGAGAGAGAGGATAGTGCGCTATGCGAAGA
GGATTGGTTTAGAAGACAGGCTCGTCTTACCAGGCGCTGTCCCCAGGATAGAGCGGTTCAGGTATGTTGCTAATGCGAGG
CTAGTGATATACCCTAGCCATATGGATTCATACTCCTACGCTGTCCTAGAAGCCCTCCACCTAGGAACCCCTGTAGTAGC
CTACGATATCCCTGCTCTGAGATTCAACTATGAGGGTGCCGAGGGCCTAGTCCTCGTTAGGGAAGGGGATGTCGAAGGAT
TGGCTGCCGAAGCCTTAAACATACTCGGGTCTAAGGATATTACAGTATCTCCTCCTAGGAAGGTGAAGAAATGGGATGAG
ATAGCAAGAGAAGAGGTTTCGTTAATAGAGAGGCTTGTAGAAAGCTAG

Upstream 100 bases:

>100_bases
AACGGGAACTAACCGTTCTAGCATGGTATGGTCAAGGATAACTATTTTAATGATAGTGTCATTATTGAGGATGGGGGGTC
CTAAATAAGGGGTGTGTTAA

Downstream 100 bases:

>100_bases
ATGTTTCTAATTAGAGTTGCCTGGTTCACGTCATACCGGACTAGTCTACTATTGTATAGAATCATTCATTTAAATTATTC
CGGAGCAAATACTGTAGCTC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: LPS Biosynthesis Protein; Lipopolysaccharide N-Acetylglucosaminyltransferase; Group 1 Glycosyltransferase; Glycosyl Transferase Group 1 Protein

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MADRATIAVVTEPFKPFFGGAIRASRSIEAYRKSFDVLVYELIRTKSDPTYSRDRNVVKVYSGPVLRALYKLRLGFLPGL
TPNGISKRMVRIGRDVSKTDVRAVVSLHEDLELLRLCSILREEYEARSAALLQLPVFIRDRRRQGEIIRAYDKWYSALYP
GLVKELAGKVRTRVKLSVLSSRSVARLLRSYDLLISVSRSIGYEMGPEWESRIHALDPGVGLDEEDLGLIKTVKERAVKE
DFIVFGGRIDALKGFIEGLEVFKAIARAYRDIKLVATGRVNPSLRERIVRYAKRIGLEDRLVLPGAVPRIERFRYVANAR
LVIYPSHMDSYSYAVLEALHLGTPVVAYDIPALRFNYEGAEGLVLVREGDVEGLAAEALNILGSKDITVSPPRKVKKWDE
IAREEVSLIERLVES

Sequences:

>Translated_415_residues
MADRATIAVVTEPFKPFFGGAIRASRSIEAYRKSFDVLVYELIRTKSDPTYSRDRNVVKVYSGPVLRALYKLRLGFLPGL
TPNGISKRMVRIGRDVSKTDVRAVVSLHEDLELLRLCSILREEYEARSAALLQLPVFIRDRRRQGEIIRAYDKWYSALYP
GLVKELAGKVRTRVKLSVLSSRSVARLLRSYDLLISVSRSIGYEMGPEWESRIHALDPGVGLDEEDLGLIKTVKERAVKE
DFIVFGGRIDALKGFIEGLEVFKAIARAYRDIKLVATGRVNPSLRERIVRYAKRIGLEDRLVLPGAVPRIERFRYVANAR
LVIYPSHMDSYSYAVLEALHLGTPVVAYDIPALRFNYEGAEGLVLVREGDVEGLAAEALNILGSKDITVSPPRKVKKWDE
IAREEVSLIERLVES
>Mature_414_residues
ADRATIAVVTEPFKPFFGGAIRASRSIEAYRKSFDVLVYELIRTKSDPTYSRDRNVVKVYSGPVLRALYKLRLGFLPGLT
PNGISKRMVRIGRDVSKTDVRAVVSLHEDLELLRLCSILREEYEARSAALLQLPVFIRDRRRQGEIIRAYDKWYSALYPG
LVKELAGKVRTRVKLSVLSSRSVARLLRSYDLLISVSRSIGYEMGPEWESRIHALDPGVGLDEEDLGLIKTVKERAVKED
FIVFGGRIDALKGFIEGLEVFKAIARAYRDIKLVATGRVNPSLRERIVRYAKRIGLEDRLVLPGAVPRIERFRYVANARL
VIYPSHMDSYSYAVLEALHLGTPVVAYDIPALRFNYEGAEGLVLVREGDVEGLAAEALNILGSKDITVSPPRKVKKWDEI
AREEVSLIERLVES

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46862; Mature: 46731

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRATIAVVTEPFKPFFGGAIRASRSIEAYRKSFDVLVYELIRTKSDPTYSRDRNVVKV
CCCCEEEEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
YSGPVLRALYKLRLGFLPGLTPNGISKRMVRIGRDVSKTDVRAVVSLHEDLELLRLCSIL
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
REEYEARSAALLQLPVFIRDRRRQGEIIRAYDKWYSALYPGLVKELAGKVRTRVKLSVLS
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRSVARLLRSYDLLISVSRSIGYEMGPEWESRIHALDPGVGLDEEDLGLIKTVKERAVKE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHH
DFIVFGGRIDALKGFIEGLEVFKAIARAYRDIKLVATGRVNPSLRERIVRYAKRIGLEDR
HHEEECCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHCCCCCC
LVLPGAVPRIERFRYVANARLVIYPSHMDSYSYAVLEALHLGTPVVAYDIPALRFNYEGA
EECCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCEEEEECCCC
EGLVLVREGDVEGLAAEALNILGSKDITVSPPRKVKKWDEIAREEVSLIERLVES
CCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADRATIAVVTEPFKPFFGGAIRASRSIEAYRKSFDVLVYELIRTKSDPTYSRDRNVVKV
CCCEEEEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEE
YSGPVLRALYKLRLGFLPGLTPNGISKRMVRIGRDVSKTDVRAVVSLHEDLELLRLCSIL
CCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
REEYEARSAALLQLPVFIRDRRRQGEIIRAYDKWYSALYPGLVKELAGKVRTRVKLSVLS
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRSVARLLRSYDLLISVSRSIGYEMGPEWESRIHALDPGVGLDEEDLGLIKTVKERAVKE
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHH
DFIVFGGRIDALKGFIEGLEVFKAIARAYRDIKLVATGRVNPSLRERIVRYAKRIGLEDR
HHEEECCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCHHHHHHHHHHHHHCCCCCC
LVLPGAVPRIERFRYVANARLVIYPSHMDSYSYAVLEALHLGTPVVAYDIPALRFNYEGA
EECCCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCEEEEECCCC
EGLVLVREGDVEGLAAEALNILGSKDITVSPPRKVKKWDEIAREEVSLIERLVES
CCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA