Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883622

Identifier: 218883622

GI number: 218883622

Start: 287304

End: 287876

Strand: Reverse

Name: 218883622

Synonym: DKAM_0311

Alternate gene names: NA

Gene position: 287876-287304 (Counterclockwise)

Preceding gene: 218883623

Following gene: 218883621

Centisome position: 21.09

GC content: 68.76

Gene sequence:

>573_bases
ATGCAAAGTGAGCTCTACGCGGAGCGGTACTTCCAGAGGCGGCGCGCCAAGGTGGACGCGAGCGAGTGGCTCGACATCGA
GCTCGCGCTGAAGGTCGCGGGCGTGAGGAAGCGAGTCCACCGGATCCTCGACGTGGGCGGCGGCACGGGGGAGCTCGCTA
GGTGGCTGAGGGGGAGGGGCTGGCTCGCGGATTACTGCGACCCCCACGCCCCGGGTGCGCCGCCCTGCTCGCTCCCAAGC
GACGTGCCGCAGGCGGACGCCTACGTGCTCCAGCACGTCCTCGAGCACGTGGAGGATCCGTACGGTGCCGTGGCATCGCT
CCTCGACAGGAGACCCCTAGCGGTCGTGGCGGTTCTCCCAGGTCACTTCGTCGAGGACGAGACGCACGTCTGCAACCACT
TCCGCCCCAGCGCCCTCCCCGCATACCGCGGGCTGTGGGGGGGGAGCGAGGATGTGCTCCCTAGAGCGGCTGGTCGCCGA
GGCTGTCTCCCGCGGCTACCAGACCGCGTGGACCGTGGACAGAATGTCGCTCCTCAGACCTTGGGATCTCGACTACGTGT
TCGTCGCGGCTAA

Upstream 100 bases:

>100_bases
AGGAGGCAGTACCTGAAGGCGTGGATCCGCTACGTCGTGCTACGCGAGGCTAGGAGGATCCGCGGGAGGGTTCCAGACGT
GTGCGAGGTCGTGCTCAGCC

Downstream 100 bases:

>100_bases
AAAGGTGAGGAAGTGGAGGCTGAGGGCGCGGCTCTACGCGGTCTGGCTACTAGCGAGGATCCTCCTTTCCAGATGAAATT
TTTTAGAAAAGGAGATCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MQSELYAERYFQRRRAKVDASEWLDIELALKVAGVRKRVHRILDVGGGTGELARWLRGRGWLADYCDPHAPGAPPCSLPS
DVPQADAYVLQHVLEHVEDPYGAVASLLDRRPLAVVAVLPGHFVEDETHVCNHFRPSALPAYRGLWGGSEDVLPRAAGRR
GCLPRLPDRVDRGQNVAPQTLGSRLRVRRG

Sequences:

>Translated_190_residues
MQSELYAERYFQRRRAKVDASEWLDIELALKVAGVRKRVHRILDVGGGTGELARWLRGRGWLADYCDPHAPGAPPCSLPS
DVPQADAYVLQHVLEHVEDPYGAVASLLDRRPLAVVAVLPGHFVEDETHVCNHFRPSALPAYRGLWGGSEDVLPRAAGRR
GCLPRLPDRVDRGQNVAPQTLGSRLRVRRG
>Mature_190_residues
MQSELYAERYFQRRRAKVDASEWLDIELALKVAGVRKRVHRILDVGGGTGELARWLRGRGWLADYCDPHAPGAPPCSLPS
DVPQADAYVLQHVLEHVEDPYGAVASLLDRRPLAVVAVLPGHFVEDETHVCNHFRPSALPAYRGLWGGSEDVLPRAAGRR
GCLPRLPDRVDRGQNVAPQTLGSRLRVRRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21109; Mature: 21109

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSELYAERYFQRRRAKVDASEWLDIELALKVAGVRKRVHRILDVGGGTGELARWLRGRG
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
WLADYCDPHAPGAPPCSLPSDVPQADAYVLQHVLEHVEDPYGAVASLLDRRPLAVVAVLP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECC
GHFVEDETHVCNHFRPSALPAYRGLWGGSEDVLPRAAGRRGCLPRLPDRVDRGQNVAPQT
CCCCCCHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHH
LGSRLRVRRG
HHHHHHCCCC
>Mature Secondary Structure
MQSELYAERYFQRRRAKVDASEWLDIELALKVAGVRKRVHRILDVGGGTGELARWLRGRG
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
WLADYCDPHAPGAPPCSLPSDVPQADAYVLQHVLEHVEDPYGAVASLLDRRPLAVVAVLP
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECC
GHFVEDETHVCNHFRPSALPAYRGLWGGSEDVLPRAAGRRGCLPRLPDRVDRGQNVAPQT
CCCCCCHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCHHH
LGSRLRVRRG
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA