Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883596

Identifier: 218883596

GI number: 218883596

Start: 263847

End: 265340

Strand: Reverse

Name: 218883596

Synonym: DKAM_0285

Alternate gene names: NA

Gene position: 265340-263847 (Counterclockwise)

Preceding gene: 218883603

Following gene: 218883592

Centisome position: 19.44

GC content: 44.44

Gene sequence:

>1494_bases
GTGAGGGAAATGAATGGGTGGAGAACTGTTTTAGTTTCCATAATATTATCCCTTATCATAGCATATATTATCGGCTCACT
ATACCCATTACCTATCGTTGGGCTAGGTCGGGGAAATCTCGTGTCAACCATCACTAAGACATCTACTAGAACCGTTACTG
AGACAAGCACTGTGACCACCACTTTGACCAGCGAGATATATAGGACGACCACCGTAACCACCACCCTCTCAGAGACAATT
ATGTCGAGCACCATGGTTACATTTACCTCTACAACAACAATTATTGAAGCACGTGAGTTAACCAGCCTGGAGCTGATTAT
ACCGTCGTTCAGACTTGTTGATGAGGGAGGCGAGTTAATGCTTGCTGGACGTTACATAGTCCTGAGATATACTTCATGGA
GGCCGGTGTTAATCATGGTGGATGCAGTAAATAATACCAACTATTTCTACCTCACGCCTTTCCAGATAACAGTGCCTGCT
GTGTATGCTAAGCTCCTGGAGTATGATGGATTATACTATATGGAAATATATGATGTAGCCGAGATTACCGATATGATTTC
ATCAAGGGGGCTGAGTAGGCCTATATTGTTATTCAAGGCTTTGAACGACTGGGCCTGTAATATTGCCTCATCCACCTCCA
CGATCAATATCACTGACTGCAGGACTACATCTATTAAAGTGGGGGCAGGTACTGGGGCAACGATTATTGAGGCGGTGGTG
AAATATGTGAATACATCATCAATACAGTACGTCTCTAGTCTCCTATACGGTGATAGCCAGCCACGAGACCTGGGGAATGC
ATCCTGGAGACTGCTTCAATGGCTTGAAGAGAACACTTCATACGACTACGTTAAGGCGGACAGTAACTATAGCTACATAT
ATGATCCAATAACCTTCGCTAACATAAGGAAGGGAATATGTACGGATTACGCATTGTTCACCGCTACAGCTCTCATTAAC
CTGAGTAGTAGTGTGTACATACTCGTCTTCAACACCACCAAGGTGGGGCATGCAACAGCGGGCATTGTGATCGGTGGTGG
ATTCTTTATATTGGACCAGGGGCTACCGCCTATCGAGTTAGAGGACTATTTCAGCAGCCTGGAATCCATAATAGGCGGTG
TATTAGTCGGCGACGTATTCCTTCATGAAGTATGGATCGAAAACAACACTGTTAAACTATTGATGATCAGGACCTCCCTC
GAAGACCTATTGAGGAAGTACCCTGATACAAATACGCTCGACGATGTCACGCCTGGTTTTATTAACGAGCTAATTAACGT
GTTAAGGGAGAGATATAGGTATAATCCGGGAGCTAGACCCACTGGTTGCCTGGAATTCAATTGGGGTGGATTCAAGTATT
ACAGTGATATATTCGCCCACGAATACGCTGTCTACGTGGCTGACAGGTTAACGGGTACGCTGGAAGCTAATATAGTTATA
ACTGATGTAGATGTACCAAAATCGTACACTATACGTGTATGCTACCAGGGTTGA

Upstream 100 bases:

>100_bases
TACTCACATATACCACCTACATGGTGTAGTAATAGGTATAAACAAAATATAAATTTTACCCACGTTATTAATACCATACA
TTATTGGGGGAATGTGTTGA

Downstream 100 bases:

>100_bases
ATACTGTGAACCATTCAAGCCAGTGTTTTATAGCTACCTAGTTTAGATAGTATTTTCCCAACTAGTTCACTGGGATTCCT
AGCGAACACGTAGAGCCCCC

Product: putative calcium-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 497; Mature: 497

Protein sequence:

>497_residues
MREMNGWRTVLVSIILSLIIAYIIGSLYPLPIVGLGRGNLVSTITKTSTRTVTETSTVTTTLTSEIYRTTTVTTTLSETI
MSSTMVTFTSTTTIIEARELTSLELIIPSFRLVDEGGELMLAGRYIVLRYTSWRPVLIMVDAVNNTNYFYLTPFQITVPA
VYAKLLEYDGLYYMEIYDVAEITDMISSRGLSRPILLFKALNDWACNIASSTSTINITDCRTTSIKVGAGTGATIIEAVV
KYVNTSSIQYVSSLLYGDSQPRDLGNASWRLLQWLEENTSYDYVKADSNYSYIYDPITFANIRKGICTDYALFTATALIN
LSSSVYILVFNTTKVGHATAGIVIGGGFFILDQGLPPIELEDYFSSLESIIGGVLVGDVFLHEVWIENNTVKLLMIRTSL
EDLLRKYPDTNTLDDVTPGFINELINVLRERYRYNPGARPTGCLEFNWGGFKYYSDIFAHEYAVYVADRLTGTLEANIVI
TDVDVPKSYTIRVCYQG

Sequences:

>Translated_497_residues
MREMNGWRTVLVSIILSLIIAYIIGSLYPLPIVGLGRGNLVSTITKTSTRTVTETSTVTTTLTSEIYRTTTVTTTLSETI
MSSTMVTFTSTTTIIEARELTSLELIIPSFRLVDEGGELMLAGRYIVLRYTSWRPVLIMVDAVNNTNYFYLTPFQITVPA
VYAKLLEYDGLYYMEIYDVAEITDMISSRGLSRPILLFKALNDWACNIASSTSTINITDCRTTSIKVGAGTGATIIEAVV
KYVNTSSIQYVSSLLYGDSQPRDLGNASWRLLQWLEENTSYDYVKADSNYSYIYDPITFANIRKGICTDYALFTATALIN
LSSSVYILVFNTTKVGHATAGIVIGGGFFILDQGLPPIELEDYFSSLESIIGGVLVGDVFLHEVWIENNTVKLLMIRTSL
EDLLRKYPDTNTLDDVTPGFINELINVLRERYRYNPGARPTGCLEFNWGGFKYYSDIFAHEYAVYVADRLTGTLEANIVI
TDVDVPKSYTIRVCYQG
>Mature_497_residues
MREMNGWRTVLVSIILSLIIAYIIGSLYPLPIVGLGRGNLVSTITKTSTRTVTETSTVTTTLTSEIYRTTTVTTTLSETI
MSSTMVTFTSTTTIIEARELTSLELIIPSFRLVDEGGELMLAGRYIVLRYTSWRPVLIMVDAVNNTNYFYLTPFQITVPA
VYAKLLEYDGLYYMEIYDVAEITDMISSRGLSRPILLFKALNDWACNIASSTSTINITDCRTTSIKVGAGTGATIIEAVV
KYVNTSSIQYVSSLLYGDSQPRDLGNASWRLLQWLEENTSYDYVKADSNYSYIYDPITFANIRKGICTDYALFTATALIN
LSSSVYILVFNTTKVGHATAGIVIGGGFFILDQGLPPIELEDYFSSLESIIGGVLVGDVFLHEVWIENNTVKLLMIRTSL
EDLLRKYPDTNTLDDVTPGFINELINVLRERYRYNPGARPTGCLEFNWGGFKYYSDIFAHEYAVYVADRLTGTLEANIVI
TDVDVPKSYTIRVCYQG

Specific function: Unknown

COG id: COG1800

COG function: function code R; Predicted transglutaminase-like proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0252 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007562 [H]

Pfam domain/function: PF04473 DUF553 [H]

EC number: NA

Molecular weight: Translated: 55475; Mature: 55475

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREMNGWRTVLVSIILSLIIAYIIGSLYPLPIVGLGRGNLVSTITKTSTRTVTETSTVTT
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEHEECCCCEEEEECCEEEE
TLTSEIYRTTTVTTTLSETIMSSTMVTFTSTTTIIEARELTSLELIIPSFRLVDEGGELM
EHHHHHHEEEEEEHHHHHHHHHCEEEEEECCEEEEEHHCCCEEEEEECCEEEECCCCCEE
LAGRYIVLRYTSWRPVLIMVDAVNNTNYFYLTPFQITVPAVYAKLLEYDGLYYMEIYDVA
EECEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEEHHHHHHHHHHCCCEEEEEEHHHH
EITDMISSRGLSRPILLFKALNDWACNIASSTSTINITDCRTTSIKVGAGTGATIIEAVV
HHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCEEEEEECEEEEEEEECCCCHHHHHHHH
KYVNTSSIQYVSSLLYGDSQPRDLGNASWRLLQWLEENTSYDYVKADSNYSYIYDPITFA
HHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEECCEEHH
NIRKGICTDYALFTATALINLSSSVYILVFNTTKVGHATAGIVIGGGFFILDQGLPPIEL
HHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCEEEEEEECEEEEEECCCCCCCH
EDYFSSLESIIGGVLVGDVFLHEVWIENNTVKLLMIRTSLEDLLRKYPDTNTLDDVTPGF
HHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCHHHHHHHCCCCCCCCCCCHHH
INELINVLRERYRYNPGARPTGCLEFNWGGFKYYSDIFAHEYAVYVADRLTGTLEANIVI
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHEEEEHHCCCEEEEEEEE
TDVDVPKSYTIRVCYQG
EECCCCCCEEEEEEECC
>Mature Secondary Structure
MREMNGWRTVLVSIILSLIIAYIIGSLYPLPIVGLGRGNLVSTITKTSTRTVTETSTVTT
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEHEECCCCEEEEECCEEEE
TLTSEIYRTTTVTTTLSETIMSSTMVTFTSTTTIIEARELTSLELIIPSFRLVDEGGELM
EHHHHHHEEEEEEHHHHHHHHHCEEEEEECCEEEEEHHCCCEEEEEECCEEEECCCCCEE
LAGRYIVLRYTSWRPVLIMVDAVNNTNYFYLTPFQITVPAVYAKLLEYDGLYYMEIYDVA
EECEEEEEEEECCCEEEEEEEEECCCCEEEEEEEEEEHHHHHHHHHHCCCEEEEEEHHHH
EITDMISSRGLSRPILLFKALNDWACNIASSTSTINITDCRTTSIKVGAGTGATIIEAVV
HHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCEEEEEECEEEEEEEECCCCHHHHHHHH
KYVNTSSIQYVSSLLYGDSQPRDLGNASWRLLQWLEENTSYDYVKADSNYSYIYDPITFA
HHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCCEEEECCEEHH
NIRKGICTDYALFTATALINLSSSVYILVFNTTKVGHATAGIVIGGGFFILDQGLPPIEL
HHHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCCCCEEEEEEECEEEEEECCCCCCCH
EDYFSSLESIIGGVLVGDVFLHEVWIENNTVKLLMIRTSLEDLLRKYPDTNTLDDVTPGF
HHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEEEECCHHHHHHHCCCCCCCCCCCHHH
INELINVLRERYRYNPGARPTGCLEFNWGGFKYYSDIFAHEYAVYVADRLTGTLEANIVI
HHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHEEEEHHCCCEEEEEEEE
TDVDVPKSYTIRVCYQG
EECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]