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The map label for this gene is 218883583

Identifier: 218883583

GI number: 218883583

Start: 249493

End: 250836

Strand: Reverse

Name: 218883583

Synonym: DKAM_0272

Alternate gene names: NA

Gene position: 250836-249493 (Counterclockwise)

Preceding gene: 218883585

Following gene: 218883581

Centisome position: 18.37

GC content: 44.79

Gene sequence:

>1344_bases
ATGGTTGTTGTACCCGGTGAGAGAATCCATGTAAGAGGTTCCTCTAGAGTTACAATCCTTATAATACTGGTTAATGTATT
AGTCTACTTCTACACCAGCTACCCTAATTTATTCCTTGAATCCACAAATGAGAGCATATACTTATTGGGCTTCACACCAG
CCACATTATTCACTAACCCGTTGCAGGGGGTTGCAAGAATATTTACAGCGATGTTCACGCATGCTGGTTTATTCCATATA
TTCTTCAACATGTACTTCCTATGGCTATTCGGCAGGAGGGTTGAGAGCATCATTGGATCCTGGAGGTATCTACTACTATA
TCTAACCTCAGGCATTGCAGCCGTGTTATTCCATGTAGCCATAATACCTGTCGGAGGATATGATTCACTGGTAGTCCCGG
CTGTAGGCGCCTCAGGAGCGATAAGCGGTGTACTGGGGTCCTACCTATTAATGTTCCCTAATACAAGGCTCATGTGGTGC
ATGTCCTTCTTGTTCCTACCATACTGCTTCCCGGTCTCTACATCTGTATTCCTCTTGATATGGTTTGCTGAGCAGGTTTT
ATATGGGTATCTGAGGCTTGGAGGTGTTGCTTACTTCGCTCATGTCGGCGGCTTCGTCGCCGGCATTGCTCTGACATATA
TAGCTACGAAGAGTATTATAGAACAGTATAAGTCCAGCTACACCTACGACTACATATACGGGTGGCTCGAGGAGATCGGG
ATAGTTTTCAGAAGACCACGGGGACTAGGTAAGATAGCTAAGACCATACTCACAGTACTACTTCTTCTTGTGGCCGCAGG
CTTCGCTTATGGCTTATACTTCATCAATACCACACCCCCATTAACCTACCTTCTCAACGTCTCAGCCAACGGCTCCAATG
ATACTGTCTCACTGGTCGTCTACCAGGGTAGCGTGGATGTTTCATATAGTAGTGTGGATAGTGTTAGGATATTATTGAAT
AGACTTACTCCCGTACTATATAATCCGAGCCTAGCCAACACCAGTGAGACATATGATAAGAACTATAATGTGAATATCCA
GGGGATTCGGGTACCCATTCACCTCAGGATGAACGCTGTATACGATGAGGTAGGGGTTATGAGGTATGGTAGTGGTGAAA
TGTATACCAGGGTAGTGAACATCGATATGTATGGTAACGCCGTAATAGGTGATGCCATATCCATCGACTTCGTGCTGGAC
TCTATGAGACTGAATACAGTACCATTTTTAAGCATCGGCGGAGTCCTAGCATTAGGGATCACTATTTACTCAGTTCTATC
CCTTAGGAGGGCTGATGAAATAGCAATGGTTACTGAGGAAGCCCCTTCATTACCTTACTACTAG

Upstream 100 bases:

>100_bases
GAGACCTGGGCCCCTATCCAGAGGTTTTGATTAAAGCTAAGCTTTATTATATGCTCGAGGCTAATAGTATTTACAGGACT
ATATGAGGGATTCATAAGTA

Downstream 100 bases:

>100_bases
ATTTTTAAGGGCTCTCCATACTTGTTTAAGTAGACTACTTCCTCTAGGGGCTTCCTCGGTCTTAGGACAGGGTTTTCAGC
AGGGTATCCCACAGCTAGTA

Product: Rhomboid family protein

Products: NA

Alternate protein names: Peptidase; Rhomboid-Like Protein; Integral Membrane Protein; S54 Family Peptidase; Transmembrane Rhomboid Family Protein; Peptidase Protein; Rhomboid Family Transmembrane Protein; Cytoplasmic Membrane Protein; Subfamily; Rhomboid Serine Protease; Membrane Associated Serine Protease; Rhomboid Family Membrane Protein; Integral Membrane Rhomboid Family Protein; Regulatory Proteins IclR

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MVVVPGERIHVRGSSRVTILIILVNVLVYFYTSYPNLFLESTNESIYLLGFTPATLFTNPLQGVARIFTAMFTHAGLFHI
FFNMYFLWLFGRRVESIIGSWRYLLLYLTSGIAAVLFHVAIIPVGGYDSLVVPAVGASGAISGVLGSYLLMFPNTRLMWC
MSFLFLPYCFPVSTSVFLLIWFAEQVLYGYLRLGGVAYFAHVGGFVAGIALTYIATKSIIEQYKSSYTYDYIYGWLEEIG
IVFRRPRGLGKIAKTILTVLLLLVAAGFAYGLYFINTTPPLTYLLNVSANGSNDTVSLVVYQGSVDVSYSSVDSVRILLN
RLTPVLYNPSLANTSETYDKNYNVNIQGIRVPIHLRMNAVYDEVGVMRYGSGEMYTRVVNIDMYGNAVIGDAISIDFVLD
SMRLNTVPFLSIGGVLALGITIYSVLSLRRADEIAMVTEEAPSLPYY

Sequences:

>Translated_447_residues
MVVVPGERIHVRGSSRVTILIILVNVLVYFYTSYPNLFLESTNESIYLLGFTPATLFTNPLQGVARIFTAMFTHAGLFHI
FFNMYFLWLFGRRVESIIGSWRYLLLYLTSGIAAVLFHVAIIPVGGYDSLVVPAVGASGAISGVLGSYLLMFPNTRLMWC
MSFLFLPYCFPVSTSVFLLIWFAEQVLYGYLRLGGVAYFAHVGGFVAGIALTYIATKSIIEQYKSSYTYDYIYGWLEEIG
IVFRRPRGLGKIAKTILTVLLLLVAAGFAYGLYFINTTPPLTYLLNVSANGSNDTVSLVVYQGSVDVSYSSVDSVRILLN
RLTPVLYNPSLANTSETYDKNYNVNIQGIRVPIHLRMNAVYDEVGVMRYGSGEMYTRVVNIDMYGNAVIGDAISIDFVLD
SMRLNTVPFLSIGGVLALGITIYSVLSLRRADEIAMVTEEAPSLPYY
>Mature_447_residues
MVVVPGERIHVRGSSRVTILIILVNVLVYFYTSYPNLFLESTNESIYLLGFTPATLFTNPLQGVARIFTAMFTHAGLFHI
FFNMYFLWLFGRRVESIIGSWRYLLLYLTSGIAAVLFHVAIIPVGGYDSLVVPAVGASGAISGVLGSYLLMFPNTRLMWC
MSFLFLPYCFPVSTSVFLLIWFAEQVLYGYLRLGGVAYFAHVGGFVAGIALTYIATKSIIEQYKSSYTYDYIYGWLEEIG
IVFRRPRGLGKIAKTILTVLLLLVAAGFAYGLYFINTTPPLTYLLNVSANGSNDTVSLVVYQGSVDVSYSSVDSVRILLN
RLTPVLYNPSLANTSETYDKNYNVNIQGIRVPIHLRMNAVYDEVGVMRYGSGEMYTRVVNIDMYGNAVIGDAISIDFVLD
SMRLNTVPFLSIGGVLALGITIYSVLSLRRADEIAMVTEEAPSLPYY

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6321538, Length=163, Percent_Identity=30.0613496932515, Blast_Score=71, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49680; Mature: 49680

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVVPGERIHVRGSSRVTILIILVNVLVYFYTSYPNLFLESTNESIYLLGFTPATLFTNP
CEECCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECHHHHHCCH
LQGVARIFTAMFTHAGLFHIFFNMYFLWLFGRRVESIIGSWRYLLLYLTSGIAAVLFHVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIPVGGYDSLVVPAVGASGAISGVLGSYLLMFPNTRLMWCMSFLFLPYCFPVSTSVFLLI
HEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
WFAEQVLYGYLRLGGVAYFAHVGGFVAGIALTYIATKSIIEQYKSSYTYDYIYGWLEEIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IVFRRPRGLGKIAKTILTVLLLLVAAGFAYGLYFINTTPPLTYLLNVSANGSNDTVSLVV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEECCCCCCEEEEEE
YQGSVDVSYSSVDSVRILLNRLTPVLYNPSLANTSETYDKNYNVNIQGIRVPIHLRMNAV
EECCEEEEHHHHHHHHHHHHHCCHHEECCCCCCCCHHCCCCCCEEEEEEEEEEEEEEEHH
YDEVGVMRYGSGEMYTRVVNIDMYGNAVIGDAISIDFVLDSMRLNTVPFLSIGGVLALGI
HHHHCEEEECCCCEEEEEEEEEECCCEEECCCEEEEEEEECHHCCCCCHHHHHHHHHHHH
TIYSVLSLRRADEIAMVTEEAPSLPYY
HHHHHHHHHCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MVVVPGERIHVRGSSRVTILIILVNVLVYFYTSYPNLFLESTNESIYLLGFTPATLFTNP
CEECCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECHHHHHCCH
LQGVARIFTAMFTHAGLFHIFFNMYFLWLFGRRVESIIGSWRYLLLYLTSGIAAVLFHVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIPVGGYDSLVVPAVGASGAISGVLGSYLLMFPNTRLMWCMSFLFLPYCFPVSTSVFLLI
HEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHH
WFAEQVLYGYLRLGGVAYFAHVGGFVAGIALTYIATKSIIEQYKSSYTYDYIYGWLEEIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
IVFRRPRGLGKIAKTILTVLLLLVAAGFAYGLYFINTTPPLTYLLNVSANGSNDTVSLVV
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEEECCCCCCEEEEEE
YQGSVDVSYSSVDSVRILLNRLTPVLYNPSLANTSETYDKNYNVNIQGIRVPIHLRMNAV
EECCEEEEHHHHHHHHHHHHHCCHHEECCCCCCCCHHCCCCCCEEEEEEEEEEEEEEEHH
YDEVGVMRYGSGEMYTRVVNIDMYGNAVIGDAISIDFVLDSMRLNTVPFLSIGGVLALGI
HHHHCEEEECCCCEEEEEEEEEECCCEEECCCEEEEEEEECHHCCCCCHHHHHHHHHHHH
TIYSVLSLRRADEIAMVTEEAPSLPYY
HHHHHHHHHCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA