Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883581
Identifier: 218883581
GI number: 218883581
Start: 248277
End: 248972
Strand: Reverse
Name: 218883581
Synonym: DKAM_0270
Alternate gene names: NA
Gene position: 248972-248277 (Counterclockwise)
Preceding gene: 218883583
Following gene: 218883580
Centisome position: 18.24
GC content: 44.97
Gene sequence:
>696_bases GTGATCACCAGCGATAAATATTGTTTTCCAAGCTATTTAAGCGGAATTGTTGAACGGTTCAATAACCCTATTAAATACTG GGCGATAATAGCTGGATCCACGGTGTATACCATGGGCACGACTTGGAGCCAGGTGGAGAAATACAGGGAGCTAGCCTATG TATCAGGATTCATCTCGTTAGCCATAGTGCTAAAGTTCTTCGAGATCCCGTTTCCACTGGCATCATTCCTAAAATATGAT TTCTCAGGGGTCCCCCTCGCGGTACTCGGGTTCAAGTCTATTAAGTGGGGTGTCACCGCTCTACCGGTGTACTATATTGT ATCTGTTATAGCCGGCTCGGATCCCATAGGTATGGCAATGAAGACTCTTGCTGAGGCTTCAACATTCATCCCGCTTGTCC TCACCTATAAACACCTAGCGGGGAGGCTAGGGTTTAAGACAGCTTATTCTTTATCAGGTGTCATAGCTATTGCATCCAGG ACTATTGTTATGACGCTTGCCAATCTAGCTGTAACGCCTTTCTGGCTCATGATCACTTATCCCAAGTATTACCCAACATA TTATGCAGCCTATGATTTCACAGTGAAGTACATGCCAGAGATAGCGGTATTCAATATAAGCATATCGCTAATAATAGTGC TTGCCGCACTACCAGTCTACAGGGTCTTAGCGAGGACGGGTGTAATAAATGAGTGA
Upstream 100 bases:
>100_bases TCTATTGCTTTTAAGACCAGGTCTCTTGGCGGAGGTTCAGGCTTGAACCTTCTTATACTGCGCCTCGATTTAAGTAGCTC AAGTAATATCTCGCTCACCA
Downstream 100 bases:
>100_bases TAACAAGCATGTGATAATACTTAGAGACGTGTGGTTCAGGTACCCGAGGAGTGGCTGGGTTTTAAAAGGAGTAAACCTCT ACGTGCGTAAAGGGGAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MITSDKYCFPSYLSGIVERFNNPIKYWAIIAGSTVYTMGTTWSQVEKYRELAYVSGFISLAIVLKFFEIPFPLASFLKYD FSGVPLAVLGFKSIKWGVTALPVYYIVSVIAGSDPIGMAMKTLAEASTFIPLVLTYKHLAGRLGFKTAYSLSGVIAIASR TIVMTLANLAVTPFWLMITYPKYYPTYYAAYDFTVKYMPEIAVFNISISLIIVLAALPVYRVLARTGVINE
Sequences:
>Translated_231_residues MITSDKYCFPSYLSGIVERFNNPIKYWAIIAGSTVYTMGTTWSQVEKYRELAYVSGFISLAIVLKFFEIPFPLASFLKYD FSGVPLAVLGFKSIKWGVTALPVYYIVSVIAGSDPIGMAMKTLAEASTFIPLVLTYKHLAGRLGFKTAYSLSGVIAIASR TIVMTLANLAVTPFWLMITYPKYYPTYYAAYDFTVKYMPEIAVFNISISLIIVLAALPVYRVLARTGVINE >Mature_231_residues MITSDKYCFPSYLSGIVERFNNPIKYWAIIAGSTVYTMGTTWSQVEKYRELAYVSGFISLAIVLKFFEIPFPLASFLKYD FSGVPLAVLGFKSIKWGVTALPVYYIVSVIAGSDPIGMAMKTLAEASTFIPLVLTYKHLAGRLGFKTAYSLSGVIAIASR TIVMTLANLAVTPFWLMITYPKYYPTYYAAYDFTVKYMPEIAVFNISISLIIVLAALPVYRVLARTGVINE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25720; Mature: 25720
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSDKYCFPSYLSGIVERFNNPIKYWAIIAGSTVYTMGTTWSQVEKYRELAYVSGFISL CCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHH AIVLKFFEIPFPLASFLKYDFSGVPLAVLGFKSIKWGVTALPVYYIVSVIAGSDPIGMAM HHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHH KTLAEASTFIPLVLTYKHLAGRLGFKTAYSLSGVIAIASRTIVMTLANLAVTPFWLMITY HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC PKYYPTYYAAYDFTVKYMPEIAVFNISISLIIVLAALPVYRVLARTGVINE CCCCCCEEEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MITSDKYCFPSYLSGIVERFNNPIKYWAIIAGSTVYTMGTTWSQVEKYRELAYVSGFISL CCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHH AIVLKFFEIPFPLASFLKYDFSGVPLAVLGFKSIKWGVTALPVYYIVSVIAGSDPIGMAM HHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHH KTLAEASTFIPLVLTYKHLAGRLGFKTAYSLSGVIAIASRTIVMTLANLAVTPFWLMITY HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC PKYYPTYYAAYDFTVKYMPEIAVFNISISLIIVLAALPVYRVLARTGVINE CCCCCCEEEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA