Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
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Accession | NC_011766 |
Length | 1,365,223 |
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The map label for this gene is 218883573
Identifier: 218883573
GI number: 218883573
Start: 242108
End: 243250
Strand: Reverse
Name: 218883573
Synonym: DKAM_0262
Alternate gene names: NA
Gene position: 243250-242108 (Counterclockwise)
Preceding gene: 218883576
Following gene: 218883570
Centisome position: 17.82
GC content: 47.68
Gene sequence:
>1143_bases GTGATCAGGAGATTCATTGGCTCGCTAATACCTCTGCTAGCCCTCGCCGTGGGGGAGGTAATAGCCGGGTTAACCCTGAG ATTCAATATAGAGTTACTACTAGTGTACTCGGTGTTAATGATTGTGATACCCGGGCTCATGGATCTCCGTGGTGACGTCT ACGGTGCCATAGGGTATAGGCTTACAACAGCGCTACATATAGGTGCGGCTGAGCCAAGGTTGTTCACAAGGTTCAACATT ATCAACACTCTTACAGGGTACACGGTATCCCTAATTACCTCGCTTGAACTATGCTTCATGGGGCTGGTACTCTCATACAT GCTTAACCTCGGCTCCATGGATCCTGTCTCCCTCGTATTCATTGTGACTACGTCGACGATCATTGTTTTCCTAGTGTTAA ACCCCATCGTGTTGGCTTCCGTGATAATGTTGTTTAAGAAAGGCGTGGATCCATCAGGCTTCGTCGCCGTGGTTGTCACC GGTGTAGGGGATGCCTTAACCCCTTTAACGCTAATCCTTGTGTCGCTTATGCACCAAGTGATATCATTCATAGTTAAGCT CCTCTTCGTACTAGGCGTGCTTGCATCGCTGGCTATATCATACCTCTACCTGGCCAGGATACATGAGGATAAACCGGTTA AGGAGAACACTGTCTCATCCATTATAGCTTCCTCGGGAAGCAGCCTGGGAGGCTTTTTTGCAGCCATCAGTATTGAGGGA TTGCTTAGCAGGGTCCCTGAGGTCCTCGGTGTTTTACCAGCCTTTAATGCTTTAATAGGGGCCTCCATGGGGCGTCTGGG CAACATGTTAAACATAGAGCTTCATGTGAAAGGCAGTGCTAATACCCGTAGATATCGGCGGGCAAGCCTTCTCGAGGCTA TAGCTACATTCATATCGATACTTGCAGCGTACACAGTGATCCTAGCTACTAGTGGCCCGGGGATGTTCACCGTGTCAATT CTCTCAATCACTATATCATTCATACTTGTATACTCGCTCTCAGCTGTTACAACCTTCTACCTCACCACTATCTCGTTTAA GCATGGCTGGGACCCTGATAACATAGTATTTCCCTTGATGACTACGTTTGCTGATTTTGCGGGCTACCTCTCTACACTAC TGATACTGGGATTAGTAATCTAA
Upstream 100 bases:
>100_bases TCCCACTGGACACCATGCAACTCCTCGAGTGGTAGATATATATACTGTAACCCTCTTAAAAGCATCAACATGGAGTGAAT AAGGGTGGAAGTATATTGCG
Downstream 100 bases:
>100_bases GCTAGTTATTCACGGCTCAACCCTGGTGCTGACTCCTCAACGCATTTCTCAGCTAGAAGAGTCTCGAGTAGCTCAACATA CTTCAGCCCGTGGTCCGGGA
Product: mgtE-like divalent cation transporter
Products: NA
Alternate protein names: MgtE-Like Divalent Cation Transporter; Divalent Cation Transporter MgtE Family; Transporter Protein
Number of amino acids: Translated: 380; Mature: 380
Protein sequence:
>380_residues MIRRFIGSLIPLLALAVGEVIAGLTLRFNIELLLVYSVLMIVIPGLMDLRGDVYGAIGYRLTTALHIGAAEPRLFTRFNI INTLTGYTVSLITSLELCFMGLVLSYMLNLGSMDPVSLVFIVTTSTIIVFLVLNPIVLASVIMLFKKGVDPSGFVAVVVT GVGDALTPLTLILVSLMHQVISFIVKLLFVLGVLASLAISYLYLARIHEDKPVKENTVSSIIASSGSSLGGFFAAISIEG LLSRVPEVLGVLPAFNALIGASMGRLGNMLNIELHVKGSANTRRYRRASLLEAIATFISILAAYTVILATSGPGMFTVSI LSITISFILVYSLSAVTTFYLTTISFKHGWDPDNIVFPLMTTFADFAGYLSTLLILGLVI
Sequences:
>Translated_380_residues MIRRFIGSLIPLLALAVGEVIAGLTLRFNIELLLVYSVLMIVIPGLMDLRGDVYGAIGYRLTTALHIGAAEPRLFTRFNI INTLTGYTVSLITSLELCFMGLVLSYMLNLGSMDPVSLVFIVTTSTIIVFLVLNPIVLASVIMLFKKGVDPSGFVAVVVT GVGDALTPLTLILVSLMHQVISFIVKLLFVLGVLASLAISYLYLARIHEDKPVKENTVSSIIASSGSSLGGFFAAISIEG LLSRVPEVLGVLPAFNALIGASMGRLGNMLNIELHVKGSANTRRYRRASLLEAIATFISILAAYTVILATSGPGMFTVSI LSITISFILVYSLSAVTTFYLTTISFKHGWDPDNIVFPLMTTFADFAGYLSTLLILGLVI >Mature_380_residues MIRRFIGSLIPLLALAVGEVIAGLTLRFNIELLLVYSVLMIVIPGLMDLRGDVYGAIGYRLTTALHIGAAEPRLFTRFNI INTLTGYTVSLITSLELCFMGLVLSYMLNLGSMDPVSLVFIVTTSTIIVFLVLNPIVLASVIMLFKKGVDPSGFVAVVVT GVGDALTPLTLILVSLMHQVISFIVKLLFVLGVLASLAISYLYLARIHEDKPVKENTVSSIIASSGSSLGGFFAAISIEG LLSRVPEVLGVLPAFNALIGASMGRLGNMLNIELHVKGSANTRRYRRASLLEAIATFISILAAYTVILATSGPGMFTVSI LSITISFILVYSLSAVTTFYLTTISFKHGWDPDNIVFPLMTTFADFAGYLSTLLILGLVI
Specific function: Unknown
COG id: COG1824
COG function: function code P; Permease, similar to cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40808; Mature: 40808
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRFIGSLIPLLALAVGEVIAGLTLRFNIELLLVYSVLMIVIPGLMDLRGDVYGAIGYR CHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LTTALHIGAAEPRLFTRFNIINTLTGYTVSLITSLELCFMGLVLSYMLNLGSMDPVSLVF HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEH IVTTSTIIVFLVLNPIVLASVIMLFKKGVDPSGFVAVVVTGVGDALTPLTLILVSLMHQV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH ISFIVKLLFVLGVLASLAISYLYLARIHEDKPVKENTVSSIIASSGSSLGGFFAAISIEG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH LLSRVPEVLGVLPAFNALIGASMGRLGNMLNIELHVKGSANTRRYRRASLLEAIATFISI HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH LAAYTVILATSGPGMFTVSILSITISFILVYSLSAVTTFYLTTISFKHGWDPDNIVFPLM HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHH TTFADFAGYLSTLLILGLVI HHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIRRFIGSLIPLLALAVGEVIAGLTLRFNIELLLVYSVLMIVIPGLMDLRGDVYGAIGYR CHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH LTTALHIGAAEPRLFTRFNIINTLTGYTVSLITSLELCFMGLVLSYMLNLGSMDPVSLVF HHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEH IVTTSTIIVFLVLNPIVLASVIMLFKKGVDPSGFVAVVVTGVGDALTPLTLILVSLMHQV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH ISFIVKLLFVLGVLASLAISYLYLARIHEDKPVKENTVSSIIASSGSSLGGFFAAISIEG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHH LLSRVPEVLGVLPAFNALIGASMGRLGNMLNIELHVKGSANTRRYRRASLLEAIATFISI HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHH LAAYTVILATSGPGMFTVSILSITISFILVYSLSAVTTFYLTTISFKHGWDPDNIVFPLM HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHH TTFADFAGYLSTLLILGLVI HHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA