| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883487
Identifier: 218883487
GI number: 218883487
Start: 163280
End: 164266
Strand: Reverse
Name: 218883487
Synonym: DKAM_0173
Alternate gene names: NA
Gene position: 164266-163280 (Counterclockwise)
Preceding gene: 218883488
Following gene: 218883486
Centisome position: 12.03
GC content: 44.38
Gene sequence:
>987_bases TTGCACTTGTTTAAAAGCGATAGAGAGAAGTTTGAGAACGAGTTGAACAAGGCTTTAAGTGAGAGGAATAAAGGCAACTT AGAGAGCGCTGTGAAATACTTTCTAAACGCCTACGAGATAGCTTTAGGGACGAAAGATCCAGAAATCTCCAAGAGAGCCG ACGAGATGTTATTCTACGCATTATTCTACGATGCGTTGGTCAAAAAGACGGCTGAATCATTTTCTAAAGCATCGCAGCAA TGCAAGAAGCTGGACCCCAGTTGGCAGCTTGACATAGGCCTAGCTAGCAAGCCCACAGCTAGCGAGTTATGCAGGGATCT TGAGATCGCTTCGATGATAGTGAGCCTCCCTGAGTTCAGCATAGACGTGGCTAGGCGCATGGATGAGTCGCTTGCCTCAA AGTACGAGGAGATAGGTAGTAAACTTCTAGCAGAAGGATCGAGGAGGCTGATAATCGAAGACTATTTGAAAATCAACGAT CCACTGTCTACAATAGGATTAAGGTTCCTTGGTTACTCTAGAATTGTGAGGGCTTTGAAGATAGAAGCCGATAATCCAGC AAATGCAATGGAGTTATACGGCGAAGCAGCAGCCTACCTCCAACAGGCTCCAGCCGAGATTAAGAAGTTTGTTGACAGCA GGATGGGCAAGCTGTCTAAAACCACCAGGTGTTGGGTTTGTCACAGAGAGATTCAAGGCGAAGAGATCAACTACATATAT CTTCCAGCATCGATTAATAAGTATATCATTGAGAAGTACGGGAATGACTCCCCATATATAATAAATAATGGGACGATCGC TGTCTGTAGAGTTTGTTACACGATGATATACAATTTAAGTGACGCCCTCGCGAAAAAATACTACGAGCAGGCTATGAAAG CACTGCAAGAGGTTGAGGCGAGGTTAAACGCTAGGATAAGCATACTTGAAGCAAAGCTGATGAGCCTAAGTATCCAAGCA GGACGCAGGTACTATATGAGGGATTAA
Upstream 100 bases:
>100_bases GGGAGTTGAAGAATATGCTCGACGAGGGATTGATCACAAGGGAAGAATACGAGCAATTGAAGAAGGAGATCCTTGAAAAG TTCAAGAAGGAGATATAGCC
Downstream 100 bases:
>100_bases AGCAGTGGAGACGGTAGCACTCCGCTGCACTAACTGCGGGGCTCCACTCCCTAAGCCCAAGCCTGGCGAAGAATGGGTTA GATGTGAGTACTGCGGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MHLFKSDREKFENELNKALSERNKGNLESAVKYFLNAYEIALGTKDPEISKRADEMLFYALFYDALVKKTAESFSKASQQ CKKLDPSWQLDIGLASKPTASELCRDLEIASMIVSLPEFSIDVARRMDESLASKYEEIGSKLLAEGSRRLIIEDYLKIND PLSTIGLRFLGYSRIVRALKIEADNPANAMELYGEAAAYLQQAPAEIKKFVDSRMGKLSKTTRCWVCHREIQGEEINYIY LPASINKYIIEKYGNDSPYIINNGTIAVCRVCYTMIYNLSDALAKKYYEQAMKALQEVEARLNARISILEAKLMSLSIQA GRRYYMRD
Sequences:
>Translated_328_residues MHLFKSDREKFENELNKALSERNKGNLESAVKYFLNAYEIALGTKDPEISKRADEMLFYALFYDALVKKTAESFSKASQQ CKKLDPSWQLDIGLASKPTASELCRDLEIASMIVSLPEFSIDVARRMDESLASKYEEIGSKLLAEGSRRLIIEDYLKIND PLSTIGLRFLGYSRIVRALKIEADNPANAMELYGEAAAYLQQAPAEIKKFVDSRMGKLSKTTRCWVCHREIQGEEINYIY LPASINKYIIEKYGNDSPYIINNGTIAVCRVCYTMIYNLSDALAKKYYEQAMKALQEVEARLNARISILEAKLMSLSIQA GRRYYMRD >Mature_328_residues MHLFKSDREKFENELNKALSERNKGNLESAVKYFLNAYEIALGTKDPEISKRADEMLFYALFYDALVKKTAESFSKASQQ CKKLDPSWQLDIGLASKPTASELCRDLEIASMIVSLPEFSIDVARRMDESLASKYEEIGSKLLAEGSRRLIIEDYLKIND PLSTIGLRFLGYSRIVRALKIEADNPANAMELYGEAAAYLQQAPAEIKKFVDSRMGKLSKTTRCWVCHREIQGEEINYIY LPASINKYIIEKYGNDSPYIINNGTIAVCRVCYTMIYNLSDALAKKYYEQAMKALQEVEARLNARISILEAKLMSLSIQA GRRYYMRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37419; Mature: 37419
Theoretical pI: Translated: 8.06; Mature: 8.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLFKSDREKFENELNKALSERNKGNLESAVKYFLNAYEIALGTKDPEISKRADEMLFYA CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LFYDALVKKTAESFSKASQQCKKLDPSWQLDIGLASKPTASELCRDLEIASMIVSLPEFS HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHH IDVARRMDESLASKYEEIGSKLLAEGSRRLIIEDYLKINDPLSTIGLRFLGYSRIVRALK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH IEADNPANAMELYGEAAAYLQQAPAEIKKFVDSRMGKLSKTTRCWVCHREIQGEEINYIY CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEE LPASINKYIIEKYGNDSPYIINNGTIAVCRVCYTMIYNLSDALAKKYYEQAMKALQEVEA ECCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLNARISILEAKLMSLSIQAGRRYYMRD HHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MHLFKSDREKFENELNKALSERNKGNLESAVKYFLNAYEIALGTKDPEISKRADEMLFYA CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LFYDALVKKTAESFSKASQQCKKLDPSWQLDIGLASKPTASELCRDLEIASMIVSLPEFS HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHH IDVARRMDESLASKYEEIGSKLLAEGSRRLIIEDYLKINDPLSTIGLRFLGYSRIVRALK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH IEADNPANAMELYGEAAAYLQQAPAEIKKFVDSRMGKLSKTTRCWVCHREIQGEEINYIY CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEE LPASINKYIIEKYGNDSPYIINNGTIAVCRVCYTMIYNLSDALAKKYYEQAMKALQEVEA ECCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLNARISILEAKLMSLSIQAGRRYYMRD HHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA