Definition Desulfurococcus kamchatkensis 1221n chromosome, complete genome.
Accession NC_011766
Length 1,365,223

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The map label for this gene is 218883487

Identifier: 218883487

GI number: 218883487

Start: 163280

End: 164266

Strand: Reverse

Name: 218883487

Synonym: DKAM_0173

Alternate gene names: NA

Gene position: 164266-163280 (Counterclockwise)

Preceding gene: 218883488

Following gene: 218883486

Centisome position: 12.03

GC content: 44.38

Gene sequence:

>987_bases
TTGCACTTGTTTAAAAGCGATAGAGAGAAGTTTGAGAACGAGTTGAACAAGGCTTTAAGTGAGAGGAATAAAGGCAACTT
AGAGAGCGCTGTGAAATACTTTCTAAACGCCTACGAGATAGCTTTAGGGACGAAAGATCCAGAAATCTCCAAGAGAGCCG
ACGAGATGTTATTCTACGCATTATTCTACGATGCGTTGGTCAAAAAGACGGCTGAATCATTTTCTAAAGCATCGCAGCAA
TGCAAGAAGCTGGACCCCAGTTGGCAGCTTGACATAGGCCTAGCTAGCAAGCCCACAGCTAGCGAGTTATGCAGGGATCT
TGAGATCGCTTCGATGATAGTGAGCCTCCCTGAGTTCAGCATAGACGTGGCTAGGCGCATGGATGAGTCGCTTGCCTCAA
AGTACGAGGAGATAGGTAGTAAACTTCTAGCAGAAGGATCGAGGAGGCTGATAATCGAAGACTATTTGAAAATCAACGAT
CCACTGTCTACAATAGGATTAAGGTTCCTTGGTTACTCTAGAATTGTGAGGGCTTTGAAGATAGAAGCCGATAATCCAGC
AAATGCAATGGAGTTATACGGCGAAGCAGCAGCCTACCTCCAACAGGCTCCAGCCGAGATTAAGAAGTTTGTTGACAGCA
GGATGGGCAAGCTGTCTAAAACCACCAGGTGTTGGGTTTGTCACAGAGAGATTCAAGGCGAAGAGATCAACTACATATAT
CTTCCAGCATCGATTAATAAGTATATCATTGAGAAGTACGGGAATGACTCCCCATATATAATAAATAATGGGACGATCGC
TGTCTGTAGAGTTTGTTACACGATGATATACAATTTAAGTGACGCCCTCGCGAAAAAATACTACGAGCAGGCTATGAAAG
CACTGCAAGAGGTTGAGGCGAGGTTAAACGCTAGGATAAGCATACTTGAAGCAAAGCTGATGAGCCTAAGTATCCAAGCA
GGACGCAGGTACTATATGAGGGATTAA

Upstream 100 bases:

>100_bases
GGGAGTTGAAGAATATGCTCGACGAGGGATTGATCACAAGGGAAGAATACGAGCAATTGAAGAAGGAGATCCTTGAAAAG
TTCAAGAAGGAGATATAGCC

Downstream 100 bases:

>100_bases
AGCAGTGGAGACGGTAGCACTCCGCTGCACTAACTGCGGGGCTCCACTCCCTAAGCCCAAGCCTGGCGAAGAATGGGTTA
GATGTGAGTACTGCGGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MHLFKSDREKFENELNKALSERNKGNLESAVKYFLNAYEIALGTKDPEISKRADEMLFYALFYDALVKKTAESFSKASQQ
CKKLDPSWQLDIGLASKPTASELCRDLEIASMIVSLPEFSIDVARRMDESLASKYEEIGSKLLAEGSRRLIIEDYLKIND
PLSTIGLRFLGYSRIVRALKIEADNPANAMELYGEAAAYLQQAPAEIKKFVDSRMGKLSKTTRCWVCHREIQGEEINYIY
LPASINKYIIEKYGNDSPYIINNGTIAVCRVCYTMIYNLSDALAKKYYEQAMKALQEVEARLNARISILEAKLMSLSIQA
GRRYYMRD

Sequences:

>Translated_328_residues
MHLFKSDREKFENELNKALSERNKGNLESAVKYFLNAYEIALGTKDPEISKRADEMLFYALFYDALVKKTAESFSKASQQ
CKKLDPSWQLDIGLASKPTASELCRDLEIASMIVSLPEFSIDVARRMDESLASKYEEIGSKLLAEGSRRLIIEDYLKIND
PLSTIGLRFLGYSRIVRALKIEADNPANAMELYGEAAAYLQQAPAEIKKFVDSRMGKLSKTTRCWVCHREIQGEEINYIY
LPASINKYIIEKYGNDSPYIINNGTIAVCRVCYTMIYNLSDALAKKYYEQAMKALQEVEARLNARISILEAKLMSLSIQA
GRRYYMRD
>Mature_328_residues
MHLFKSDREKFENELNKALSERNKGNLESAVKYFLNAYEIALGTKDPEISKRADEMLFYALFYDALVKKTAESFSKASQQ
CKKLDPSWQLDIGLASKPTASELCRDLEIASMIVSLPEFSIDVARRMDESLASKYEEIGSKLLAEGSRRLIIEDYLKIND
PLSTIGLRFLGYSRIVRALKIEADNPANAMELYGEAAAYLQQAPAEIKKFVDSRMGKLSKTTRCWVCHREIQGEEINYIY
LPASINKYIIEKYGNDSPYIINNGTIAVCRVCYTMIYNLSDALAKKYYEQAMKALQEVEARLNARISILEAKLMSLSIQA
GRRYYMRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37419; Mature: 37419

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLFKSDREKFENELNKALSERNKGNLESAVKYFLNAYEIALGTKDPEISKRADEMLFYA
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LFYDALVKKTAESFSKASQQCKKLDPSWQLDIGLASKPTASELCRDLEIASMIVSLPEFS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHH
IDVARRMDESLASKYEEIGSKLLAEGSRRLIIEDYLKINDPLSTIGLRFLGYSRIVRALK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IEADNPANAMELYGEAAAYLQQAPAEIKKFVDSRMGKLSKTTRCWVCHREIQGEEINYIY
CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEE
LPASINKYIIEKYGNDSPYIINNGTIAVCRVCYTMIYNLSDALAKKYYEQAMKALQEVEA
ECCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLNARISILEAKLMSLSIQAGRRYYMRD
HHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHLFKSDREKFENELNKALSERNKGNLESAVKYFLNAYEIALGTKDPEISKRADEMLFYA
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
LFYDALVKKTAESFSKASQQCKKLDPSWQLDIGLASKPTASELCRDLEIASMIVSLPEFS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCHH
IDVARRMDESLASKYEEIGSKLLAEGSRRLIIEDYLKINDPLSTIGLRFLGYSRIVRALK
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IEADNPANAMELYGEAAAYLQQAPAEIKKFVDSRMGKLSKTTRCWVCHREIQGEEINYIY
CCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCEEE
LPASINKYIIEKYGNDSPYIINNGTIAVCRVCYTMIYNLSDALAKKYYEQAMKALQEVEA
ECCCHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLNARISILEAKLMSLSIQAGRRYYMRD
HHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA