| Definition | Desulfurococcus kamchatkensis 1221n chromosome, complete genome. |
|---|---|
| Accession | NC_011766 |
| Length | 1,365,223 |
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The map label for this gene is 218883486
Identifier: 218883486
GI number: 218883486
Start: 161800
End: 163275
Strand: Reverse
Name: 218883486
Synonym: DKAM_0172
Alternate gene names: NA
Gene position: 163275-161800 (Counterclockwise)
Preceding gene: 218883487
Following gene: 218883485
Centisome position: 11.96
GC content: 47.02
Gene sequence:
>1476_bases GTGGAGACGGTAGCACTCCGCTGCACTAACTGCGGGGCTCCACTCCCTAAGCCCAAGCCTGGCGAAGAATGGGTTAGATG TGAGTACTGCGGCTTCCTGAACAAGGTTGTTGATGCTACAGCATACGTCGAAAAGCTTAGAAGAGACCTTGAAAAATGGA TTCGAGAAATTCTCCCTTCTACAACGATCTCGTCGACGGTGGCAGATCTTGCGGCTAGACACCAGATCTTCCAGGAGATT ATAAAGCCGAAGGTAATGATCGCGAGGAGCAATTTAAGAGCCAAGTACCTGCTTTATCTTTCAACTCCTCTAACGCCGAT CTTCCCATCATCTTCTTCAAGCGATGATCCTAAACCGATCTTTGAGGAAACGCTAAAAATCCAAGCCGTAAGAGACCTCG CCGTGTCAGAAGATGATTTGAAGCTGATACAGGAGACGATAATATACGGCAACACAGCAGGCTATCTGCTCAACGCGGTT AAAGCACTATCCAGGTTCGACGTCAAATCAGCATTGAAGAATATCGAAGAAGCGCTAGCAGACATCCCCGATGAGCCTGG ATTCAATCTCGTTAAGCAGAGGCTTAAGGCTGCAAGGTCTGTGCTAACAGCACTCAGCCTCTTATACGATAGGGATACCC AAGCAGCCATTGATATCGCGAAGACGGGGATAGACCAGTACAATACGCTCTTGGATAGTGTAGGATCGCCTGCCTCGCCA GAAGTCAATAGAGGGGTTTTAGAGGCCGAGAAGATGATTGCGGAGATAGTGTATAAAATCTCTGAAGCATCACACGAGTT TTTCAGAGCTGGCAAGGATCCCTTGGAGGTATTGGGGTTTGTCGAGGCATATACAAAGGTTTTCCAGCTAATTAGAGAAA CCTATAAGAGGCCTTTGAGCGATCTCGTGGAGATTGTTGAGAACCTTAGGGGGATCGTGCTTGCTAAAAACGGGTCACCT CAAGTCTACGTTGTTTCAGGCAGCGGAAATTTCTATCTACCGTTCTACGTGGTTGAATCCAGGTTTTCCTTTGTTAAAGG CATGTTTCTGAAGAAGGGTGAGGAGTCGAGGCTGACAATGCTTGTCTCGGCAATAGCACCATATGCTGCAAACCCTGTGA CAGATGTCTTTGGAGTGTACTCAGGTAAACCTGTGAAGCTAGAGAAGGTCGAGGAGGCACCACTTTACCCGGTTTTAAAG AATATTATCTCATCGATAAAAGCCTCGGGTCTGCCGACCGATGCTAGAGTAACCCCACCGCTTATATCAAGCGTGCTCGC TGAGAAGATCTTCGACAGCTACATGAATATGGTCAGTAACAAGTATGGTGGGAAAATAATATTCGTATCCTCCCAGGCAA CAGGCATTATATACATTCCGTTCAACCCTGTCAACCAGCGGACACTAGCCTACGAGAGAGGCCTAAGCATTAACCTTATA ACAGACTTGGATAATCTGGCTAAACTGAGTGTATAA
Upstream 100 bases:
>100_bases GTTGAGGCGAGGTTAAACGCTAGGATAAGCATACTTGAAGCAAAGCTGATGAGCCTAAGTATCCAAGCAGGACGCAGGTA CTATATGAGGGATTAAAGCA
Downstream 100 bases:
>100_bases GATGGGTAGAGATGACTGAAGTATTAATCATTCTGGGAGTTATTTCAACAATAGTTTACACAGCCATGTCTTTCACAAGG CTGAAGCTTGCAACGGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues METVALRCTNCGAPLPKPKPGEEWVRCEYCGFLNKVVDATAYVEKLRRDLEKWIREILPSTTISSTVADLAARHQIFQEI IKPKVMIARSNLRAKYLLYLSTPLTPIFPSSSSSDDPKPIFEETLKIQAVRDLAVSEDDLKLIQETIIYGNTAGYLLNAV KALSRFDVKSALKNIEEALADIPDEPGFNLVKQRLKAARSVLTALSLLYDRDTQAAIDIAKTGIDQYNTLLDSVGSPASP EVNRGVLEAEKMIAEIVYKISEASHEFFRAGKDPLEVLGFVEAYTKVFQLIRETYKRPLSDLVEIVENLRGIVLAKNGSP QVYVVSGSGNFYLPFYVVESRFSFVKGMFLKKGEESRLTMLVSAIAPYAANPVTDVFGVYSGKPVKLEKVEEAPLYPVLK NIISSIKASGLPTDARVTPPLISSVLAEKIFDSYMNMVSNKYGGKIIFVSSQATGIIYIPFNPVNQRTLAYERGLSINLI TDLDNLAKLSV
Sequences:
>Translated_491_residues METVALRCTNCGAPLPKPKPGEEWVRCEYCGFLNKVVDATAYVEKLRRDLEKWIREILPSTTISSTVADLAARHQIFQEI IKPKVMIARSNLRAKYLLYLSTPLTPIFPSSSSSDDPKPIFEETLKIQAVRDLAVSEDDLKLIQETIIYGNTAGYLLNAV KALSRFDVKSALKNIEEALADIPDEPGFNLVKQRLKAARSVLTALSLLYDRDTQAAIDIAKTGIDQYNTLLDSVGSPASP EVNRGVLEAEKMIAEIVYKISEASHEFFRAGKDPLEVLGFVEAYTKVFQLIRETYKRPLSDLVEIVENLRGIVLAKNGSP QVYVVSGSGNFYLPFYVVESRFSFVKGMFLKKGEESRLTMLVSAIAPYAANPVTDVFGVYSGKPVKLEKVEEAPLYPVLK NIISSIKASGLPTDARVTPPLISSVLAEKIFDSYMNMVSNKYGGKIIFVSSQATGIIYIPFNPVNQRTLAYERGLSINLI TDLDNLAKLSV >Mature_491_residues METVALRCTNCGAPLPKPKPGEEWVRCEYCGFLNKVVDATAYVEKLRRDLEKWIREILPSTTISSTVADLAARHQIFQEI IKPKVMIARSNLRAKYLLYLSTPLTPIFPSSSSSDDPKPIFEETLKIQAVRDLAVSEDDLKLIQETIIYGNTAGYLLNAV KALSRFDVKSALKNIEEALADIPDEPGFNLVKQRLKAARSVLTALSLLYDRDTQAAIDIAKTGIDQYNTLLDSVGSPASP EVNRGVLEAEKMIAEIVYKISEASHEFFRAGKDPLEVLGFVEAYTKVFQLIRETYKRPLSDLVEIVENLRGIVLAKNGSP QVYVVSGSGNFYLPFYVVESRFSFVKGMFLKKGEESRLTMLVSAIAPYAANPVTDVFGVYSGKPVKLEKVEEAPLYPVLK NIISSIKASGLPTDARVTPPLISSVLAEKIFDSYMNMVSNKYGGKIIFVSSQATGIIYIPFNPVNQRTLAYERGLSINLI TDLDNLAKLSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54384; Mature: 54384
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METVALRCTNCGAPLPKPKPGEEWVRCEYCGFLNKVVDATAYVEKLRRDLEKWIREILPS CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TTISSTVADLAARHQIFQEIIKPKVMIARSNLRAKYLLYLSTPLTPIFPSSSSSDDPKPI CHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCHH FEETLKIQAVRDLAVSEDDLKLIQETIIYGNTAGYLLNAVKALSRFDVKSALKNIEEALA HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIPDEPGFNLVKQRLKAARSVLTALSLLYDRDTQAAIDIAKTGIDQYNTLLDSVGSPASP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCC EVNRGVLEAEKMIAEIVYKISEASHEFFRAGKDPLEVLGFVEAYTKVFQLIRETYKRPLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DLVEIVENLRGIVLAKNGSPQVYVVSGSGNFYLPFYVVESRFSFVKGMFLKKGEESRLTM HHHHHHHHCCCEEEEECCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHH LVSAIAPYAANPVTDVFGVYSGKPVKLEKVEEAPLYPVLKNIISSIKASGLPTDARVTPP HHHHHCCCCCCCHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH LISSVLAEKIFDSYMNMVSNKYGGKIIFVSSQATGIIYIPFNPVNQRTLAYERGLSINLI HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHCCCEEEEE TDLDNLAKLSV CCHHHHHHCCC >Mature Secondary Structure METVALRCTNCGAPLPKPKPGEEWVRCEYCGFLNKVVDATAYVEKLRRDLEKWIREILPS CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TTISSTVADLAARHQIFQEIIKPKVMIARSNLRAKYLLYLSTPLTPIFPSSSSSDDPKPI CHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCHH FEETLKIQAVRDLAVSEDDLKLIQETIIYGNTAGYLLNAVKALSRFDVKSALKNIEEALA HHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIPDEPGFNLVKQRLKAARSVLTALSLLYDRDTQAAIDIAKTGIDQYNTLLDSVGSPASP CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCC EVNRGVLEAEKMIAEIVYKISEASHEFFRAGKDPLEVLGFVEAYTKVFQLIRETYKRPLS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DLVEIVENLRGIVLAKNGSPQVYVVSGSGNFYLPFYVVESRFSFVKGMFLKKGEESRLTM HHHHHHHHCCCEEEEECCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHH LVSAIAPYAANPVTDVFGVYSGKPVKLEKVEEAPLYPVLKNIISSIKASGLPTDARVTPP HHHHHCCCCCCCHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHH LISSVLAEKIFDSYMNMVSNKYGGKIIFVSSQATGIIYIPFNPVNQRTLAYERGLSINLI HHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHCCCEEEEE TDLDNLAKLSV CCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA