Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is 218710412
Identifier: 218710412
GI number: 218710412
Start: 2618052
End: 2618303
Strand: Reverse
Name: 218710412
Synonym: VS_2449
Alternate gene names: NA
Gene position: 2618303-2618052 (Counterclockwise)
Preceding gene: 218710414
Following gene: 218710410
Centisome position: 79.36
GC content: 38.89
Gene sequence:
>252_bases GTGACATTTCTCGGCGATCTCTGTTTCTCTGATTTCTTTGTTGATGTTGTCCATCACAAAGTTAACGACTTCGGATGTGA AGGCTTTTACAGGCAGCTGGTTGTTGTTGTTTGTGTCTCTGTCGATATCGAAGTGGGACTCGAACATATGCCGTGTCTTA GCCTTAAGCTCTTCGAATTGACTGGTCAGATGATTACTGTTTGTTTCTATGATAAAAAATATATTCTTATGATTTCGAAC GATATTAGGTAA
Upstream 100 bases:
>100_bases TTAACTTTTTGGCAAGTAGAATGCGTTTATCGCACACGAAGTCTCTAAAGCTTACTCCAAAGTGTAGATGAAACTTCTTA GAAAAATAGGTGGTTGAACA
Downstream 100 bases:
>100_bases CGGGTCAGAGCAAATAATAACAATTCTTTTGTTCAAATTTTCGCAAATAGATAAAGCCATGGTAAGTAGTTGGATTTTAT CAGGGGTATTCAAAATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MTFLGDLCFSDFFVDVVHHKVNDFGCEGFYRQLVVVVCVSVDIEVGLEHMPCLSLKLFELTGQMITVCFYDKKYILMISN DIR
Sequences:
>Translated_83_residues MTFLGDLCFSDFFVDVVHHKVNDFGCEGFYRQLVVVVCVSVDIEVGLEHMPCLSLKLFELTGQMITVCFYDKKYILMISN DIR >Mature_82_residues TFLGDLCFSDFFVDVVHHKVNDFGCEGFYRQLVVVVCVSVDIEVGLEHMPCLSLKLFELTGQMITVCFYDKKYILMISND IR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9576; Mature: 9445
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 6.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLGDLCFSDFFVDVVHHKVNDFGCEGFYRQLVVVVCVSVDIEVGLEHMPCLSLKLFEL CCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEC TGQMITVCFYDKKYILMISNDIR CCCEEEEEEECCEEEEEEECCCC >Mature Secondary Structure TFLGDLCFSDFFVDVVHHKVNDFGCEGFYRQLVVVVCVSVDIEVGLEHMPCLSLKLFEL CCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHEEC TGQMITVCFYDKKYILMISNDIR CCCEEEEEEECCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA