Click here to switch to the map view.

The map label for this gene is 218710407

Identifier: 218710407

GI number: 218710407

Start: 2614612

End: 2615451

Strand: Reverse

Name: 218710407

Synonym: VS_2444

Alternate gene names: NA

Gene position: 2615451-2614612 (Counterclockwise)

Preceding gene: 218710408

Following gene: 218710406

Centisome position: 79.27

GC content: 40.83

Gene sequence:

>840_bases
TTGAACAACTCCCGCCTGTTATTACCTTCGATATTCTTTCCATGGCATGGGAAGTCTATTTTACCTCTGATGGACACGAG
GAAGAAAATAATGAATAAGAGTCAAGTTTTCCTACTGTTTTTACTGTCCGTAGTATTTGGCTTAGCGGCTGTATTTTTTG
CTAAGCAGTGGATGGAAGATCAAGTTCAACCAACCGTTGAAGTTGAAGCTGTGGAGCGTCATCCAGTCGTGGTGGCATCA
CAAGAAATTGAAGCTGGAACCATTATTGAGGAACAGTTCTTAGCGACAAAGTTGATGGAAGTTGATTGGATTAATGAAAA
TAATTTTTCCGATGCTTCTGAATTGGTTGGCAAAGTGGTGGCCAATACTATTTATGCTGGAGAAGTGCTTCATAAAATGC
GTTTTACTATTCCAGGAGAAGGCTCAACGCTTGCTGCATTAATACCTGAGAATAAACGTGCGGTAACAATACGAGTGGAT
GACGTTATTGGTGTGGCTGGTTTTCTATTACCAGGTAATAAAGTTGACATACTTAGCACCGTTTCTTACAGCAAAAACTC
AGCAGCAACTCGTACCGTGTTGAAAGATATCAAGGTATTGGCAGTAGACCAAACGGCAAAAACGAATGAAAACAGTCCTA
TTATCGTACGAGCTGTGACATTAGAGGTTTCACCTAAAGATGCTGAAAAACTTTTAACAGCGAAGAGTAAAGGCAGTATT
CAACTGACACTGAGAAACCCTCATGAAGTTGAGAAAAAGGTTGTTCGTCGATACGTACCTAAGCCGAGTGTGACGATCAT
TAAAGGTACTCAAGCATCTAGTGTTCGCGTCAAGGATTGA

Upstream 100 bases:

>100_bases
TTCTTTGAGCGTTTGTCTCAAATGCACACGCTTCTTAAGGTGCCACTTTTCCCATGTTTACCGAAAGATCTCGTTGGTAT
AAGCAAAGATATTCTTTCGT

Downstream 100 bases:

>100_bases
GGTGAGTTATGAAAATAATAATAACGTGTATTTTGAGCTTCGTTTGTTTCTCTACACTGAGCTTTGCTGCTCTACAAACG
GGTAAAACGGTAACGGTTCC

Product: Flp pilus assembly protein CpaB

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein CpaB; Pilus Assembly Transmembrane Protein; Pilus Assembly Protein; Flp Pilus Assembly Protein CpaB-Like Protein; Flp Pilus Assembly Protein; Flp Pilus Assembly Protein RcpC/CpaB; Signal Peptide Protein CpaB Like Protein; CpaB Pilus Assembly Protein; Pilus Assembly-Related Exported Protein; Flp Pilus Assembly Protein Cpab; CpaB2 Pilus Assembly Protein; CpaB2 Flp Pilus Assembly Protein CpaB; SAF Domain Protein

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MNNSRLLLPSIFFPWHGKSILPLMDTRKKIMNKSQVFLLFLLSVVFGLAAVFFAKQWMEDQVQPTVEVEAVERHPVVVAS
QEIEAGTIIEEQFLATKLMEVDWINENNFSDASELVGKVVANTIYAGEVLHKMRFTIPGEGSTLAALIPENKRAVTIRVD
DVIGVAGFLLPGNKVDILSTVSYSKNSAATRTVLKDIKVLAVDQTAKTNENSPIIVRAVTLEVSPKDAEKLLTAKSKGSI
QLTLRNPHEVEKKVVRRYVPKPSVTIIKGTQASSVRVKD

Sequences:

>Translated_279_residues
MNNSRLLLPSIFFPWHGKSILPLMDTRKKIMNKSQVFLLFLLSVVFGLAAVFFAKQWMEDQVQPTVEVEAVERHPVVVAS
QEIEAGTIIEEQFLATKLMEVDWINENNFSDASELVGKVVANTIYAGEVLHKMRFTIPGEGSTLAALIPENKRAVTIRVD
DVIGVAGFLLPGNKVDILSTVSYSKNSAATRTVLKDIKVLAVDQTAKTNENSPIIVRAVTLEVSPKDAEKLLTAKSKGSI
QLTLRNPHEVEKKVVRRYVPKPSVTIIKGTQASSVRVKD
>Mature_279_residues
MNNSRLLLPSIFFPWHGKSILPLMDTRKKIMNKSQVFLLFLLSVVFGLAAVFFAKQWMEDQVQPTVEVEAVERHPVVVAS
QEIEAGTIIEEQFLATKLMEVDWINENNFSDASELVGKVVANTIYAGEVLHKMRFTIPGEGSTLAALIPENKRAVTIRVD
DVIGVAGFLLPGNKVDILSTVSYSKNSAATRTVLKDIKVLAVDQTAKTNENSPIIVRAVTLEVSPKDAEKLLTAKSKGSI
QLTLRNPHEVEKKVVRRYVPKPSVTIIKGTQASSVRVKD

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30833; Mature: 30833

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNSRLLLPSIFFPWHGKSILPLMDTRKKIMNKSQVFLLFLLSVVFGLAAVFFAKQWMED
CCCCEEEECEEECCCCCCEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVQPTVEVEAVERHPVVVASQEIEAGTIIEEQFLATKLMEVDWINENNFSDASELVGKVV
HCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHH
ANTIYAGEVLHKMRFTIPGEGSTLAALIPENKRAVTIRVDDVIGVAGFLLPGNKVDILST
HHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCEEEEEECCHHHHHHEECCCCCEEEEEE
VSYSKNSAATRTVLKDIKVLAVDQTAKTNENSPIIVRAVTLEVSPKDAEKLLTAKSKGSI
CCCCCCCHHHHHHHHHCEEEEEECCCCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCCE
QLTLRNPHEVEKKVVRRYVPKPSVTIIKGTQASSVRVKD
EEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEECC
>Mature Secondary Structure
MNNSRLLLPSIFFPWHGKSILPLMDTRKKIMNKSQVFLLFLLSVVFGLAAVFFAKQWMED
CCCCEEEECEEECCCCCCEECCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVQPTVEVEAVERHPVVVASQEIEAGTIIEEQFLATKLMEVDWINENNFSDASELVGKVV
HCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHH
ANTIYAGEVLHKMRFTIPGEGSTLAALIPENKRAVTIRVDDVIGVAGFLLPGNKVDILST
HHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCEEEEEECCHHHHHHEECCCCCEEEEEE
VSYSKNSAATRTVLKDIKVLAVDQTAKTNENSPIIVRAVTLEVSPKDAEKLLTAKSKGSI
CCCCCCCHHHHHHHHHCEEEEEECCCCCCCCCCEEEEEEEEEECCCHHHHHHHCCCCCCE
QLTLRNPHEVEKKVVRRYVPKPSVTIIKGTQASSVRVKD
EEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA