Definition Vibrio splendidus LGP32 chromosome 1, complete genome.
Accession NC_011753
Length 3,299,303

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The map label for this gene is 218710395

Identifier: 218710395

GI number: 218710395

Start: 2602283

End: 2603212

Strand: Reverse

Name: 218710395

Synonym: VS_2432

Alternate gene names: NA

Gene position: 2603212-2602283 (Counterclockwise)

Preceding gene: 218710396

Following gene: 218710394

Centisome position: 78.9

GC content: 40.75

Gene sequence:

>930_bases
ATGAATAGTATAAAAGTTGCAGTATTACTCCCATGTTTTAATGAAGCGGGTGCTATCGGAAAGACAGTTATGTCTTTTAA
GCAGGCTTTACCTGATGCGTCTATTTATGTGTATGACAACAACTCAACCGACAACACGGTAAACGAGGCCTTGCAAGCTG
GGGTTATTGTTCGACATGAGCCTCGCCAAGGTAAAGGGGAGGTAGTCAGGAGAATGTTCTCTGATATTGATGCTGATATC
TATGTGATGGCTGATGGTGATGACACTTACGATGCGTCAATATGCCCTGCGCTGATCGAACAATTGGATAATGAAAAACT
CGATATGATTATTGGAAGTCGAGAGCGAGCTTCAATGGCTTATCCCAAAGGGCATATCCTAGGAAATAAGCTGTTTTCAT
CGCTGATTAATTTAGCATTCAATGCTCAATTGAGTGATGTGTTTTCTGGTTATCGAATTATGAGCCATCGATTTGTCAAA
ACCGTACCTATTTTCAGTGATGGCTTCCAAATAGAAACAGAGCTTACCGTTCATGCGCTACATCATAATATGCCAATCAA
AGAAGTTTCGACGCAATATCAATCAAGGCCTGAAGGCACAGTCAGCAAATTGAATACCTTTAGTGATGGGCTCAAAATTC
TCAATTTCATTTTGTTCTTATTGAGAGATGTAAAGCCAATGTTTTTCTTTGGCGTGTTGTCTATGTTGCTTTGCTTCATT
TCATTGGTTTTAGGAATCCCCGTTATCATCGACTTCATCGATACTGGGCTCGTCGAAAGGGTGCCTACTGCGATTTTGTC
TAGCTCAATTGCGTTGATAGCGGTGATGTCTTTTTTCTGTGGGTTGATACTCGACAACGTATCACGAGGTAGGCGAGAGA
TGAGGATTCTTTCTATATTAAGAACGAGTGATAAAACGCTATCTGAATAG

Upstream 100 bases:

>100_bases
TTATAAACAAATTATACAGCTCAAATGTTCCCAACTGGTTGGAGACCATATATGACGATGTTCCTGATGGCTACCGAATC
TTTAGGGTTAGGGAGAGTTT

Downstream 100 bases:

>100_bases
GAATCAAGCATGAGAACAAGCAAGGATGAAGACAAAGAGTGGATCGATTATTTGTCCCGTTTCAGTGACGAATATGATGA
GCGAGTTTATAACGGCAATA

Product: glycosyltransferase

Products: NA

Alternate protein names: ORF10X9 [H]

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MNSIKVAVLLPCFNEAGAIGKTVMSFKQALPDASIYVYDNNSTDNTVNEALQAGVIVRHEPRQGKGEVVRRMFSDIDADI
YVMADGDDTYDASICPALIEQLDNEKLDMIIGSRERASMAYPKGHILGNKLFSSLINLAFNAQLSDVFSGYRIMSHRFVK
TVPIFSDGFQIETELTVHALHHNMPIKEVSTQYQSRPEGTVSKLNTFSDGLKILNFILFLLRDVKPMFFFGVLSMLLCFI
SLVLGIPVIIDFIDTGLVERVPTAILSSSIALIAVMSFFCGLILDNVSRGRREMRILSILRTSDKTLSE

Sequences:

>Translated_309_residues
MNSIKVAVLLPCFNEAGAIGKTVMSFKQALPDASIYVYDNNSTDNTVNEALQAGVIVRHEPRQGKGEVVRRMFSDIDADI
YVMADGDDTYDASICPALIEQLDNEKLDMIIGSRERASMAYPKGHILGNKLFSSLINLAFNAQLSDVFSGYRIMSHRFVK
TVPIFSDGFQIETELTVHALHHNMPIKEVSTQYQSRPEGTVSKLNTFSDGLKILNFILFLLRDVKPMFFFGVLSMLLCFI
SLVLGIPVIIDFIDTGLVERVPTAILSSSIALIAVMSFFCGLILDNVSRGRREMRILSILRTSDKTLSE
>Mature_309_residues
MNSIKVAVLLPCFNEAGAIGKTVMSFKQALPDASIYVYDNNSTDNTVNEALQAGVIVRHEPRQGKGEVVRRMFSDIDADI
YVMADGDDTYDASICPALIEQLDNEKLDMIIGSRERASMAYPKGHILGNKLFSSLINLAFNAQLSDVFSGYRIMSHRFVK
TVPIFSDGFQIETELTVHALHHNMPIKEVSTQYQSRPEGTVSKLNTFSDGLKILNFILFLLRDVKPMFFFGVLSMLLCFI
SLVLGIPVIIDFIDTGLVERVPTAILSSSIALIAVMSFFCGLILDNVSRGRREMRILSILRTSDKTLSE

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34358; Mature: 34358

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIKVAVLLPCFNEAGAIGKTVMSFKQALPDASIYVYDNNSTDNTVNEALQAGVIVRHE
CCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCEEEEC
PRQGKGEVVRRMFSDIDADIYVMADGDDTYDASICPALIEQLDNEKLDMIIGSRERASMA
CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHEECCCHHHHCC
YPKGHILGNKLFSSLINLAFNAQLSDVFSGYRIMSHRFVKTVPIFSDGFQIETELTVHAL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHH
HHNMPIKEVSTQYQSRPEGTVSKLNTFSDGLKILNFILFLLRDVKPMFFFGVLSMLLCFI
HCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SLVLGIPVIIDFIDTGLVERVPTAILSSSIALIAVMSFFCGLILDNVSRGRREMRILSIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTSDKTLSE
HHCCHHCCC
>Mature Secondary Structure
MNSIKVAVLLPCFNEAGAIGKTVMSFKQALPDASIYVYDNNSTDNTVNEALQAGVIVRHE
CCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHCCCEEEEC
PRQGKGEVVRRMFSDIDADIYVMADGDDTYDASICPALIEQLDNEKLDMIIGSRERASMA
CCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCHHEECCCHHHHCC
YPKGHILGNKLFSSLINLAFNAQLSDVFSGYRIMSHRFVKTVPIFSDGFQIETELTVHAL
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHH
HHNMPIKEVSTQYQSRPEGTVSKLNTFSDGLKILNFILFLLRDVKPMFFFGVLSMLLCFI
HCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
SLVLGIPVIIDFIDTGLVERVPTAILSSSIALIAVMSFFCGLILDNVSRGRREMRILSIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTSDKTLSE
HHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152 [H]