Definition | Vibrio splendidus LGP32 chromosome 1, complete genome. |
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Accession | NC_011753 |
Length | 3,299,303 |
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The map label for this gene is cya [H]
Identifier: 218710391
GI number: 218710391
Start: 2597743
End: 2598906
Strand: Reverse
Name: cya [H]
Synonym: VS_2428
Alternate gene names: 218710391
Gene position: 2598906-2597743 (Counterclockwise)
Preceding gene: 218710392
Following gene: 218710389
Centisome position: 78.77
GC content: 38.75
Gene sequence:
>1164_bases GTGGCTAATAGGAATTTATCTAGAGTCGATGACATTATGTATAAAGGCGATGCAGCAATAGAGCCATCTGGGATAGTGCC TCTTCATAAAGATCTAATTATCCAAACTGCATTCCAGAACAATTGCATTATCCTAGTTCGGCCTGTAAATAAATTGTCGA CTTCGCTTATTGCGGAAGGCTACGCTACAAAAGATTTACATGTGAAAGGAAAATCATCGAACTGGGGACCTCAATCTGGC TTTATTTGCTGTGACCAAAAATTTAGTAAACTGTTTAAGAAAAGCCCTCAGGAAATTGTAAAATTTAACAGTAAAGTTAA AGAGTCAATACGGGATAGGTTTGCCAAACCTGTACCACTACTGATATCAAACGAGCGTCTGAATTCTTTAATTAAAGACA AAATGCTGCATATAGTCTCTAAAGATCGGGGGATTATTCATGTGACTAACCATGGAAAGCCTCACCACGATTTCGTTCTA TATCCAAATGCAATGATGCCTTTTGGTGACTATCCTATACGGTATCGAAATCATCAAAAGAATTTAATGGTGATGTTCAA GAATCTTCCGCAATTGAAACATGGCTATTGGGTTATGACAAAAAATGGCGAATCTATTGAGGAGCTCCTTGTTCTAGCTG AATTTGATAGTTGTGTACCATTAACCGCTGATTATGATTTGTTTGGTGTGCTACCACATTTAAGCAGTTTCTCACACTCA AAACCTTTAAATCTCAAGTCAGCAGCGCGTGTTGTATCAACTGCTTTAGCCCAAAAAGAAAGGCGTATCAACGATGCTGA TCTAGGGCGGATTTCTAGCATAACACGCAGAGTTAAAACACAAATCAACCAAAAAATAGGGCTTAGAAAAGTTATCCATC ATGGATGCGAACTAGATAACCCCGTTACAGAGCTAGATTATCCAATTACCGCTTTTACTCCGTGGAACGAAGTGGTTGGG GCGGAAAACCAAGGCGAGTTAGAGGCTTTAATCAGAGATACAATAAAGCTGGGCTATGCCTTTTATGCTAATCGACTGTG GAGTCAGTTAGGGAAAGTTAATACCAATTCAAAACAGTTAGGCTATTTAAGAGATTATCAGTGGGATACGAATATTCCAG AGAGTTCGTTGTCAAAATTAGAAGTATTAACCCCTAGGGTTTGA
Upstream 100 bases:
>100_bases ATCTTAACCTTCAACTAACGCATGATGGCTTATTGATATCGTGGCTCGATCTTGTAAGTGTATGCTGAATGTTTCACTCG TTTTGAAATTAGTATAGATT
Downstream 100 bases:
>100_bases CAGATTCTAGTCGTTTAAGCTCTCTTTAGGTTGGTGATCCCAATGTGTTCACTAACCTAAATTAACTCGCTATGTACCTT TATTAACAAGTAACATCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: AC-HLY; ACT; Cyclolysin; ATP pyrophosphate-lyase; Adenylyl cyclase [H]
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MANRNLSRVDDIMYKGDAAIEPSGIVPLHKDLIIQTAFQNNCIILVRPVNKLSTSLIAEGYATKDLHVKGKSSNWGPQSG FICCDQKFSKLFKKSPQEIVKFNSKVKESIRDRFAKPVPLLISNERLNSLIKDKMLHIVSKDRGIIHVTNHGKPHHDFVL YPNAMMPFGDYPIRYRNHQKNLMVMFKNLPQLKHGYWVMTKNGESIEELLVLAEFDSCVPLTADYDLFGVLPHLSSFSHS KPLNLKSAARVVSTALAQKERRINDADLGRISSITRRVKTQINQKIGLRKVIHHGCELDNPVTELDYPITAFTPWNEVVG AENQGELEALIRDTIKLGYAFYANRLWSQLGKVNTNSKQLGYLRDYQWDTNIPESSLSKLEVLTPRV
Sequences:
>Translated_387_residues MANRNLSRVDDIMYKGDAAIEPSGIVPLHKDLIIQTAFQNNCIILVRPVNKLSTSLIAEGYATKDLHVKGKSSNWGPQSG FICCDQKFSKLFKKSPQEIVKFNSKVKESIRDRFAKPVPLLISNERLNSLIKDKMLHIVSKDRGIIHVTNHGKPHHDFVL YPNAMMPFGDYPIRYRNHQKNLMVMFKNLPQLKHGYWVMTKNGESIEELLVLAEFDSCVPLTADYDLFGVLPHLSSFSHS KPLNLKSAARVVSTALAQKERRINDADLGRISSITRRVKTQINQKIGLRKVIHHGCELDNPVTELDYPITAFTPWNEVVG AENQGELEALIRDTIKLGYAFYANRLWSQLGKVNTNSKQLGYLRDYQWDTNIPESSLSKLEVLTPRV >Mature_386_residues ANRNLSRVDDIMYKGDAAIEPSGIVPLHKDLIIQTAFQNNCIILVRPVNKLSTSLIAEGYATKDLHVKGKSSNWGPQSGF ICCDQKFSKLFKKSPQEIVKFNSKVKESIRDRFAKPVPLLISNERLNSLIKDKMLHIVSKDRGIIHVTNHGKPHHDFVLY PNAMMPFGDYPIRYRNHQKNLMVMFKNLPQLKHGYWVMTKNGESIEELLVLAEFDSCVPLTADYDLFGVLPHLSSFSHSK PLNLKSAARVVSTALAQKERRINDADLGRISSITRRVKTQINQKIGLRKVIHHGCELDNPVTELDYPITAFTPWNEVVGA ENQGELEALIRDTIKLGYAFYANRLWSQLGKVNTNSKQLGYLRDYQWDTNIPESSLSKLEVLTPRV
Specific function: This adenylate cyclase belongs to a special class of bacterial toxin. It causes whooping cough by acting on mammalian cells by elevating cAMP-concentration and thus disrupts normal cell function [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 17 hemolysin-type calcium-binding repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005165 - InterPro: IPR018511 - InterPro: IPR001343 - InterPro: IPR018504 - InterPro: IPR003995 - InterPro: IPR011049 [H]
Pfam domain/function: PF03497 Anthrax_toxA; PF00353 HemolysinCabind; PF02382 RTX [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 43962; Mature: 43831
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANRNLSRVDDIMYKGDAAIEPSGIVPLHKDLIIQTAFQNNCIILVRPVNKLSTSLIAEG CCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEECCCCCEEEEECHHHHHHHHHHCC YATKDLHVKGKSSNWGPQSGFICCDQKFSKLFKKSPQEIVKFNSKVKESIRDRFAKPVPL CCCCEEEEECCCCCCCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCE LISNERLNSLIKDKMLHIVSKDRGIIHVTNHGKPHHDFVLYPNAMMPFGDYPIRYRNHQK EECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCEEECCCCC NLMVMFKNLPQLKHGYWVMTKNGESIEELLVLAEFDSCVPLTADYDLFGVLPHLSSFSHS HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC KPLNLKSAARVVSTALAQKERRINDADLGRISSITRRVKTQINQKIGLRKVIHHGCELDN CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PVTELDYPITAFTPWNEVVGAENQGELEALIRDTIKLGYAFYANRLWSQLGKVNTNSKQL CHHHCCCCEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC GYLRDYQWDTNIPESSLSKLEVLTPRV CCCCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure ANRNLSRVDDIMYKGDAAIEPSGIVPLHKDLIIQTAFQNNCIILVRPVNKLSTSLIAEG CCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHEEEECCCCCEEEEECHHHHHHHHHHCC YATKDLHVKGKSSNWGPQSGFICCDQKFSKLFKKSPQEIVKFNSKVKESIRDRFAKPVPL CCCCEEEEECCCCCCCCCCCEEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCE LISNERLNSLIKDKMLHIVSKDRGIIHVTNHGKPHHDFVLYPNAMMPFGDYPIRYRNHQK EECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCEEECCCCC NLMVMFKNLPQLKHGYWVMTKNGESIEELLVLAEFDSCVPLTADYDLFGVLPHLSSFSHS HHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCC KPLNLKSAARVVSTALAQKERRINDADLGRISSITRRVKTQINQKIGLRKVIHHGCELDN CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PVTELDYPITAFTPWNEVVGAENQGELEALIRDTIKLGYAFYANRLWSQLGKVNTNSKQL CHHHCCCCEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHC GYLRDYQWDTNIPESSLSKLEVLTPRV CCCCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7557410; 12910271 [H]